Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002824-TA|BGIBMGA002824-PA|IPR000203|GPS,
IPR000832|GPCR, family 2, secretin-like, IPR000215|Proteinase
inhibitor I4, serpin
(1228 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 36 0.046
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 36 0.046
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 36 0.046
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 36 0.046
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 36 0.046
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 36 0.046
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 36 0.046
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 36 0.046
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 36 0.046
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 36 0.046
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 36 0.046
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 31 1.3
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 30 2.3
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 29 3.0
SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosac... 29 5.3
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 29 5.3
SPAC17C9.06 |sam50||SAM complex subunit Sam50 |Schizosaccharomyc... 28 7.0
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 28 7.0
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 28 9.2
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 35.5 bits (78), Expect = 0.046
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 359 IHTDSKSYTISQSNKVLHIPKKNSLDHVYAVKLHLQSYTDPEKIYKALEKLEEYIYLSTK 418
I S +T+SQ NKV +I K+ L +Y + + T+ EK+ K ++ LE + L+ +
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 419 YFNV 422
+ +
Sbjct: 410 NYRL 413
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 363 SKSYTISQSNKVLHIPKKNSLDH-VYAVKLHLQSY-TDPEKIYKAL--EKLEEYIYLSTK 418
S S +S+ N+ + + KKN L+H + A K +L+SY EK YK L K+++ + TK
Sbjct: 90 STSDYVSRKNRHMQLIKKNILEHDLQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTK 149
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 746
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 976 LEYNIACMLVGVLLHYAVLASFCWMLVAAIISY----RKLVIVFSRDASHKLLKASAFSW 1031
LEY+I L HY L M++ + +Y RKLV + + +
Sbjct: 444 LEYDILSKLFSAAKHYNSLNGLLAMILVHMANYKLARRKLVQIGALKFLTRQCFIQTQDS 503
Query: 1032 GAPCAVVGVLLSVAPHS 1048
A A+ +L+SVAPHS
Sbjct: 504 NAAFALAKILISVAPHS 520
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 29.5 bits (63), Expect = 3.0
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 663 LQVMENLESIINNASLAVSLETISSSFDQVDGLLSEDDDLDIPGELLHLLDN---IGPRL 719
++++ + S ++ +S+ L I + DQV S DL EL +L + I PR
Sbjct: 688 IELITSKSSSVHPSSVLTYLALIPLTLDQVKSGTSSVMDLSSSRELSNLNERSITIDPRA 747
Query: 720 NLDGSDAATVR-ENIALVVAKGDESLPMRGLRLATRDTDAFTD-HAFEVIRDEINSSLLQ 777
+ ++ A A+ S+ + +A + ++ T H FEV +EINSS+
Sbjct: 748 EEQAQGLEQEQGQDEAKSPAEQSSSVNLIDFPMANTNGESQTQPHYFEVSEEEINSSMDL 807
Query: 778 PELSDVV 784
DV+
Sbjct: 808 GRQQDVL 814
>SPBC19C2.07 |fba1||fructose-bisphosphate aldolase
Fba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 358
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 392 HLQSYTDPEKI---YKALEKLEEYIYLSTKYFNVHG 424
H + YT PE I Y+ L + Y ++ + NVHG
Sbjct: 191 HTELYTQPEDIWDVYRELSSVTPYFSIAAAFGNVHG 226
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 659 EDQLLQVMENLESIINNA-SLAVSLETISSSFDQVDGLLSEDD 700
ED + L SI N S VSL +SS+ D++ GLLS D+
Sbjct: 407 EDTFSERTLGLNSIDNTEISEVVSLGLVSSALDKITGLLSADN 449
>SPAC17C9.06 |sam50||SAM complex subunit Sam50 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 475
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 662 LLQVMENLESIINNASLAVSLETISSSFDQVDGLLSEDDDLDIPGELLHLLDNIGPRLNL 721
LL+ + ++ N ET + D+ +S DDDLD+ ++ PRL +
Sbjct: 81 LLETLNAIQETTGNLMAFNVYETANIKIDRASSSVSGDDDLDVTIQVKE-----KPRLYV 135
Query: 722 D-GSDAATVRENI-ALVVAK 739
+ G+D V N+ A V+A+
Sbjct: 136 ETGTDVGNVEGNVHANVLAR 155
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 341 DEENTYVVQEKKNGYYWCIHTDSKSYTISQSNKVLHIPKKNSL---DHVYAVKLHLQSYT 397
D Y+V+EKK+G ++ + SK I ++ +++ L +H + V L+ S+
Sbjct: 205 DVGRVYLVREKKSGKFYAMKVLSKQEMIKRNKSKRAFAEQHILATSNHPFIVTLY-HSFQ 263
Query: 398 DPEKIYKALE 407
E +Y +E
Sbjct: 264 SDEYLYLCME 273
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 27.9 bits (59), Expect = 9.2
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 295 KDVVLN-LTIDSDDRLILNVSEPVPRRYLKCFTDSVKY---YPTPVDLDHDEENTYV--- 347
K +++N L +D R++ + S+ V + ++ P++ HD E T V
Sbjct: 217 KGLLMNHLCVDQHGRIVFDSSDTVIKDLENKDVEAESQEAVVAAPIE-SHDTEMTNVHDN 275
Query: 348 -VQEKKNGYYWCIHTDSKSYTISQSNKVLHIPKKNSLD 384
+E NG Y C TD TI S + K +LD
Sbjct: 276 ISRETLNGIYKCYFTDIDQLTICPSLQGFEFDSKGNLD 313
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.137 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,397,047
Number of Sequences: 5004
Number of extensions: 235966
Number of successful extensions: 672
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 659
Number of HSP's gapped (non-prelim): 20
length of query: 1228
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1147
effective length of database: 1,957,154
effective search space: 2244855638
effective search space used: 2244855638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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