Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002823-TA|BGIBMGA002823-PA|IPR003123|Vacuolar sorting
protein 9, IPR002653|Zinc finger, A20-type, IPR013995|Vacuolar sorting
protein 9, subgroup
(696 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 64 6e-11
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 36 0.025
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 32 0.23
SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomy... 32 0.23
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 31 0.71
SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor Vp... 31 0.71
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 30 0.94
SPBP35G2.07 |ilv1||acetolactate synthase catalytic subunit|Schiz... 30 0.94
SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces p... 29 2.9
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 28 3.8
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 5.0
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 28 5.0
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 6.6
SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces p... 27 6.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 8.8
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 8.8
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 27 8.8
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 64.1 bits (149), Expect = 6e-11
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 237 IVFSPSGTDDERQDRAMSERIQQLSWVGEKHLECKLDRNNAECRRLLYKAISELLGMDAA 296
I S +DD +DR +SE+++ W+ E++L+ K +++++ +L + + A
Sbjct: 209 IPLSSEHSDDVEEDRVLSEKMELFQWITEENLDIKKQKSSSKFFKLAADELRRINDYHAP 268
Query: 297 RWSGAKLARVRRCARHVXXXXXXXXXXXXXXXXX--XXXXXXXXNPPRLISNINYVTRFC 354
R K+ + C + + P L+SNI Y+ RF
Sbjct: 269 R---DKIICLLNCCKVIFSYLRNVVKEESADMFVPILIFVVLQARPAHLVSNIQYIQRFR 325
Query: 355 NAQRLMTGEGGYYFTNLCCAVSFIQNMTAESLSMDQKEFD 394
+ ++L TGE YY + L A+SFI+ + SL++ ++EF+
Sbjct: 326 SPEKL-TGEVMYYLSTLMGAMSFIETLDCSSLTITEEEFN 364
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 487 APPPTTEPGPARTSEPPALLNE--PSVVIDETEKLNILGFEVVEERSPSKSPQLDR-LSD 543
APP T P PA P E P +++D+ + I F++ ++ +K QLDR D
Sbjct: 333 APPVKTSPHPASYRPQPTRNVEVRPLLMLDDVQSAQITQFQIRLQQRLTKKEQLDRNWVD 392
Query: 544 LKQSSSTELLTPSP 557
L ++ ST + T P
Sbjct: 393 LLETPSTVIHTNYP 406
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 538 LDRLSDLKQSSSTELLTPSPMVLTPFDCRSLDEVLTPDEFPDNI 581
+D L+D QS S+ L PS +TP D S +TP PDN+
Sbjct: 263 IDGLTDFIQSPSSGYLDPSSTPITPLD--SAINQITPPFLPDNL 304
>SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 74 SDQRKSERGLK-LSSHASFSKFEEKRLRQSETLKKTNLLKFNVFKKNIT--DDHEIS 127
S Q K +R LK +K EE++ + ETL+K NLLK ++T DD +I+
Sbjct: 198 SQQAKKQRELKKFGKQVQLAKQEERQREKKETLEKINLLKRKHTGGDLTTEDDFDIA 254
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 30.7 bits (66), Expect = 0.71
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 486 SAPPPTTEPGPARTSEPPALL-NEPSVVIDETEKLNILGF-EVVEERSPSKS 535
+AP T P PA+TS P A L +EP ++ L + +EE SP KS
Sbjct: 120 AAPAATPAPAPAQTSAPAAALPDEPPKALEVLHTLVAQKLKKSIEEVSPQKS 171
>SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor
Vps902 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 30.7 bits (66), Expect = 0.71
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 343 LISNINYVTRFCNAQRLMTGEGGYYFTNLCCAVSFI 378
LIS++N+V RF NA ++GE Y T A++FI
Sbjct: 235 LISHLNFVLRFRNAD-FLSGEQRYCLTTFEAALTFI 269
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 30.3 bits (65), Expect = 0.94
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 25 DQNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSDQRKSERGLK 84
++ L K D + + + Y S ++++R+R + ++ S S LPR D + + +
Sbjct: 198 ERKSLNSKRHVDNYNENRRRHYDSYSSYDELERRRSSNESYSRRSELPRRDYNRHDERER 257
Query: 85 LSSHASFSKFEEKRLRQSETL 105
S H + ++E++
Sbjct: 258 YSYHRRRERSNSPSYTKNESI 278
>SPBP35G2.07 |ilv1||acetolactate synthase catalytic
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 669
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 494 PGPARTSEPP----ALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQSSS 549
PGP P ++L EP ++ +N EV+EE S + + ++DR+++L + +
Sbjct: 237 PGPVLVDLPKDVTASVLKEPIPILSSVPSMNRRMKEVLEEGSKNVTAKIDRVANLLKLAK 296
Query: 550 TELLTPSPMVLTPFDCRSL 568
++ VL +C +L
Sbjct: 297 KPVIFCGHGVLANPECPTL 315
>SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 255 ERIQQLSWVGEKHLECKLDRNNAECRRLLYKAISELLGMDAARWS 299
+R++Q W G K +E LD + + R SELL WS
Sbjct: 97 QRLRQYCWSGGKRMESCLDTSLSTYERDYLTRYSELLAAYKGAWS 141
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 28.3 bits (60), Expect = 3.8
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 53 EQMQRQRKAEKASSFTSTLPRSDQRKSE-------RGLKLSSHASFSKFEEKRLRQSETL 105
+ + + +A K+ +S S RKSE + +K SSH S +F+ + ++ T
Sbjct: 433 QPLSKDTEAPKSQFSSSPTKESTTRKSEVEPPSPSKEIK-SSHFSVPEFKFEPKTEATTD 491
Query: 106 KKTNLLKFNVFKKNITDDHEISTERRQPEFKIPT 139
KK N+ KF FK T D + T R + PT
Sbjct: 492 KKLNVPKFE-FKPTATAD--VQTNRLKENEPKPT 522
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 5.0
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 515 ETEKLNILGFEVVEERSPSKSPQLDRLSDLKQSSSTELLTPSPMVLTPFDCRSLDEVLTP 574
+ E+L E E R+ P D + QS L TPS VLTP ++ L P
Sbjct: 282 DDEELESFVNEEEEFRASDFMPAEDNVR-CTQSDREPLRTPS--VLTP--ANTIQRGLLP 336
Query: 575 DEFPDNIPGLSDVNYDIDLSDFSADTSLAEDPPAPDRRRTFD 616
+ +P LSDV D ++S S+ S A P + R++D
Sbjct: 337 SK----LPALSDV--DENISTSSSPRSPASLAPVNNSERSYD 372
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 597 SADTSLAEDPPAPDRRRTFDPFAPQTSKDSYKLLESFDEFSIVDNARE-SDPYEVVHRP- 654
+ DTS A P++R+ DP P+ +Y L + I ++ E S+ + V++
Sbjct: 94 AVDTSEAVASMTPNKRKARDPAQPKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVNKAM 153
Query: 655 -DPFGSVLDND 664
+ +GS+ ++D
Sbjct: 154 HEKWGSLSEDD 164
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 6.6
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 550 TELLTPSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSDVNYDIDLSDFSADTSLAEDPPAP 609
T TP P +P +S + T FP N Y FS PA
Sbjct: 440 TMYTTPLPTANSPIAYQSYSVMPTYWSFPQNYDSTVPAVYPYMPPPFSGSDMNVMSNPAA 499
Query: 610 DRRRTFDPFAPQTSKDSYKLLESFD 634
D R++ P A Q S + + +D
Sbjct: 500 DTLRSYSP-ASQVSTPPFGFVYYYD 523
>SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 527 VEERSPSKSPQLDRLSDLKQSSSTELL-TPSPMVLTPFDCRSLDEVLTPDE 576
V R S + D + L S ST L+ T +P + PF SLD +++ E
Sbjct: 11 VPSRGGSNADLCDDIERLLVSGSTSLISTVAPFDVPPFKVESLDVLISQSE 61
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/64 (21%), Positives = 34/64 (53%)
Query: 49 KCHREQMQRQRKAEKASSFTSTLPRSDQRKSERGLKLSSHASFSKFEEKRLRQSETLKKT 108
+ ++EQ++ Q + EKA+ + ++ + + LS ++S S + ++E + K
Sbjct: 1271 RLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSSDASRLKNELVSKE 1330
Query: 109 NLLK 112
NL++
Sbjct: 1331 NLIE 1334
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 8.8
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 597 SADTSLAEDPPAPDR-RRTFDPF-APQTSKDSYKLLESFDEFSIVDNARESDPYEVVHR- 653
S+DTS E PP P FDP+ A + + + S D SI N + P V +
Sbjct: 401 SSDTSCTESPPEPSHFAWAFDPYNATASPYYNQNINSSIDYSSIYSNDVPAIPPNVPYTF 460
Query: 654 PDPF 657
DP+
Sbjct: 461 VDPY 464
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 504 ALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQSSSTELLTPSPMVLTP 562
++ + PS ID T +GF + SP+ + RL+++ SS+ + T S LTP
Sbjct: 78 SISSSPSPKIDGTAASIGMGFPPM---SPNLQSSIPRLTNVSSSSNLSMNTISSTALTP 133
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,181,589
Number of Sequences: 5004
Number of extensions: 137114
Number of successful extensions: 490
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 19
length of query: 696
length of database: 2,362,478
effective HSP length: 78
effective length of query: 618
effective length of database: 1,972,166
effective search space: 1218798588
effective search space used: 1218798588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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