Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002823-TA|BGIBMGA002823-PA|IPR003123|Vacuolar sorting
protein 9, IPR002653|Zinc finger, A20-type, IPR013995|Vacuolar sorting
protein 9, subgroup
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0508 - 29897536-29897982 44 5e-04
06_03_0745 + 24109406-24109921 43 7e-04
03_02_0450 + 8600078-8600351,8600944-8601037,8601094-8601241,860... 42 0.002
02_01_0715 - 5346036-5346557 41 0.003
09_04_0363 + 16957949-16958361,16958524-16958527 39 0.015
08_02_0786 + 21198247-21198921 39 0.015
02_04_0078 + 19507705-19508169 37 0.047
07_01_0493 - 3715677-3715907,3716675-3716861,3717631-3717818 36 0.082
07_01_0496 - 3730822-3731280 36 0.11
03_06_0270 - 32768979-32769488 36 0.14
03_01_0581 + 4310136-4310186,4310940-4311144,4311245-4311410,431... 35 0.19
03_06_0269 - 32761354-32761857,32762094-32762190,32762387-327624... 35 0.25
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 34 0.44
02_01_0372 + 2668597-2668671,2669021-2669126,2669279-2669334,266... 33 0.58
01_06_0827 + 32260313-32260525,32261862-32262716 32 1.3
07_01_0492 - 3708379-3708864 32 1.8
09_06_0137 - 21080263-21081894 31 3.1
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 31 3.1
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 31 3.1
08_02_0519 - 18097509-18097726,18097803-18097967,18098095-180983... 31 4.1
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 31 4.1
04_03_0983 + 21423086-21423280,21423330-21423404,21423531-214236... 31 4.1
04_03_0771 + 19434460-19434987 31 4.1
02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389... 31 4.1
11_06_0610 - 25449085-25453284 30 5.4
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 30 7.2
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 29 9.5
09_03_0174 - 13097138-13098265 29 9.5
06_01_1058 - 8502401-8502586,8502857-8502917,8503262-8503447,850... 29 9.5
>01_06_0508 - 29897536-29897982
Length = 148
Score = 43.6 bits (98), Expect = 5e-04
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 29 LKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASS 66
L C NGC +FG+ +G CSKC+R+ + Q A A++
Sbjct: 14 LPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAA 51
>06_03_0745 + 24109406-24109921
Length = 171
Score = 43.2 bits (97), Expect = 7e-04
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 26 QNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSDQRKSERGLKL 85
+ + C N C +FG+ CSKCH+E + +Q +A+ A+S ++ E +
Sbjct: 12 EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAG 71
Query: 86 SSHASFSKFEEKRL 99
+ + ++ E K L
Sbjct: 72 HAEVAVAQVEVKTL 85
>03_02_0450 +
8600078-8600351,8600944-8601037,8601094-8601241,
8602226-8602396,8602779-8602958,8603148-8603177,
8603925-8604707
Length = 559
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 357 QRLMTGEGGYYFTNLCCAVSFIQNMTAESLSMDQKEF 393
Q + E Y+FTN+ A SFI N+ ESLSMD+++F
Sbjct: 304 QSRLVSEAQYFFTNILSAESFIWNIDGESLSMDERDF 340
>02_01_0715 - 5346036-5346557
Length = 173
Score = 41.1 bits (92), Expect = 0.003
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 26 QNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASS 66
+ + C N C +FG+ CSKCH+E + ++ +A+ A+S
Sbjct: 12 EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAAS 52
>09_04_0363 + 16957949-16958361,16958524-16958527
Length = 138
Score = 38.7 bits (86), Expect = 0.015
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSDQRKS 79
C NGC +FG+ + CSKC+R+Q++ + ++ + ++ S
Sbjct: 2 CTNGCGFFGSEATKNLCSKCYRDQLKEAASSAAVAAAAPDVANKEEEAS 50
Score = 31.9 bits (69), Expect = 1.8
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 25 DQNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASS 66
D+ C + C +F + + + CSKC+R+ ++ A +S
Sbjct: 57 DEQLALCASSCGFFSSKETKNMCSKCYRDHLKATSPATATAS 98
>08_02_0786 + 21198247-21198921
Length = 224
Score = 38.7 bits (86), Expect = 0.015
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 25 DQNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSD 75
D+ C +GC +FG+ + CSKC+R+ ++ +SS +T +D
Sbjct: 75 DEQLALCSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTD 125
Score = 37.1 bits (82), Expect = 0.047
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQ 56
C NGC +FG+ + CSKC+R+Q++
Sbjct: 21 CANGCGFFGSEATKKLCSKCYRDQLK 46
>02_04_0078 + 19507705-19508169
Length = 154
Score = 37.1 bits (82), Expect = 0.047
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQRKA 61
C N C +FG+P CSKC+R++ R+ A
Sbjct: 15 CANNCGFFGSPATLDLCSKCYRDRQGRESTA 45
>07_01_0493 - 3715677-3715907,3716675-3716861,3717631-3717818
Length = 201
Score = 36.3 bits (80), Expect = 0.082
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQR 59
C GC +FG+ G CSKC++EQ + R
Sbjct: 17 CAAGCGFFGSAATGGLCSKCYKEQQPQPR 45
>07_01_0496 - 3730822-3731280
Length = 152
Score = 35.9 bits (79), Expect = 0.11
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQR 59
C GC +FG+ G CSKC+++Q + R
Sbjct: 18 CAAGCGFFGSAATDGLCSKCYKQQQPQPR 46
>03_06_0270 - 32768979-32769488
Length = 169
Score = 35.5 bits (78), Expect = 0.14
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTL 71
C GC +FG+ CS+C+RE E+A++ S L
Sbjct: 24 CVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL 64
>03_01_0581 +
4310136-4310186,4310940-4311144,4311245-4311410,
4312035-4312257,4312891-4312967,4313091-4313278,
4313363-4313457,4313674-4313807,4313914-4314024,
4314304-4314619,4314919-4315040,4315183-4315293,
4315824-4316012,4316105-4316263,4316449-4316530,
4317080-4317190
Length = 779
Score = 35.1 bits (77), Expect = 0.19
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 3/112 (2%)
Query: 486 SAPPPTTEPGPARTSEPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLK 545
SAP + EP P ++ L S+ + L LG+ E S LD LS
Sbjct: 650 SAPEISIEPNPCSSTNYSTLSGRHSISEERQNYLRRLGY---PELHSSNFLDLDLLSSSG 706
Query: 546 QSSSTELLTPSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSDVNYDIDLSDFS 597
S E+ S ++ +P D S++ + E N G D + S S
Sbjct: 707 NSCEEEIYERSSLINSPMDVVSIESTTSYSEQGHNDEGRDDTDLSRSSSQMS 758
>03_06_0269 -
32761354-32761857,32762094-32762190,32762387-32762421,
32763035-32763040
Length = 213
Score = 34.7 bits (76), Expect = 0.25
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSDQRKSERGLKLSSHAS 90
C N C +FG+ + CSKC+R+ + KA+ ++ P + + +++ S
Sbjct: 77 CVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATVVEKKPLASLSSTPLVTEVTDGGS 132
Query: 91 FSKFEEKRLRQSETLK 106
S + K++ + +T K
Sbjct: 133 GSVADGKQVMEEDTPK 148
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 33.9 bits (74), Expect = 0.44
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 154 PSFPPQIDRDARGFVHTFILDVIKWAAIMNVDELSERVQKQYQRFMKHMETSQHYASVDS 213
P +P Q + GF ++ W N+ +E YQ+FM HM S H A VD
Sbjct: 592 PQYPVQSNLFDCGFFSLRYIE--NWDG-KNLQSFNEGDMPNYQKFMTHMMVSSHLAKVDH 648
Query: 214 D 214
D
Sbjct: 649 D 649
>02_01_0372 +
2668597-2668671,2669021-2669126,2669279-2669334,
2669830-2669907,2669993-2670066,2670147-2670280,
2670377-2670472,2670703-2670854
Length = 256
Score = 33.5 bits (73), Expect = 0.58
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 78 KSERGLKLSSHASFSKFEEKRLRQ--SETLKK-TNLLKFNVFKKNITDDHEISTER 130
+SER L SH + K + +RLR+ +ETL K TN +KF+ +N+ ++ E + R
Sbjct: 44 ESERRQALESHVADLKSDNERLRRLYTETLFKFTNQMKFHTESRNLKEELEKANTR 99
>01_06_0827 + 32260313-32260525,32261862-32262716
Length = 355
Score = 32.3 bits (70), Expect = 1.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHRE 53
C +GC ++GNP CS C+R+
Sbjct: 205 CASGCGFYGNPATLDMCSVCYRQ 227
>07_01_0492 - 3708379-3708864
Length = 161
Score = 31.9 bits (69), Expect = 1.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHRE 53
C N C +FG+ CSKC+R+
Sbjct: 23 CVNNCGFFGSSMTNNMCSKCYRD 45
>09_06_0137 - 21080263-21081894
Length = 543
Score = 31.1 bits (67), Expect = 3.1
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 487 APPPTTEPGPARTSEPPALLNEPSVVIDETEKLNILGFEVVEERS-------PSKSPQLD 539
APPP EP P E PAL PS+ ET+ L+ L +V+ R P+ +P
Sbjct: 30 APPPEPEPEPELEPE-PAL--APSLTTAETKLLDALHAALVDHRRAHPAAPVPATAPSEP 86
Query: 540 RLSDLKQSSSTELLT-PSPMV 559
L +L + S L + PSP +
Sbjct: 87 PLPELSSALSGLLASPPSPQL 107
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 501 EPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQSSSTE 551
E P ++ + V++ +TEK++ L E VEE S + R DL++ S E
Sbjct: 1497 EAPPVVQQTEVLVQDTEKVDSLTAE-VEELKTSLQSEKQRADDLEKKRSEE 1546
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 31.1 bits (67), Expect = 3.1
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 42 QWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSDQRKSERGLKLSSHASFSKFEEKRLRQ 101
+W+G K + + R ++ F L D S+RG S H + + + + L Q
Sbjct: 216 KWRGDSEKLVKVLFELARHHAPSTIF---LDEIDAIISQRGEARSEHEASRRLKTELLIQ 272
Query: 102 SETLKKTNLLKFNVFKKNITDDHEISTERR-QPEFKIPTAVFEGMKADFRVRFPSFPPQI 160
+ L KTN L F + N+ + + + RR + +P E A F PS ++
Sbjct: 273 MDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEAEARHAMFEELLPSTTSKL 332
Query: 161 D 161
+
Sbjct: 333 E 333
>08_02_0519 -
18097509-18097726,18097803-18097967,18098095-18098305,
18099151-18099419,18100915-18101017
Length = 321
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 40 NPQWQGYCSKCHREQMQRQRKAE---KASSFTSTLPRSDQRKSERGLKLSSHASFSKFEE 96
N Q YC+KC E Q + K+ F+ST + +E+ ++ ++ E
Sbjct: 51 NKQLPIYCTKCKGEHHQLKFKSTVMVDGEEFSSTFCHRRVKDAEQD---AAKVAYDTLLE 107
Query: 97 KRLRQSETLKKTNLLKFNV-FKKNITDDHEISTERRQPEFKI 137
++ +++ L+ +V F K+I ++ T+ QPE+ +
Sbjct: 108 RKETETDDTDVFELIDQDVVFSKSILHEYTTKTKTDQPEYSV 149
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 596 FSADTSLAEDPPAPDRRRTFDPFAPQTSKDSYKLLESFDEFSIVDNARESDPYEVV 651
FS +DP A D+ +PFA Q + + +++ +S +F D R SD Y+ V
Sbjct: 315 FSVAMQRYKDPEARDK---MNPFAEQEAWEEHQIGKSKLQFGSKDRKRSSDDYQYV 367
>04_03_0983 +
21423086-21423280,21423330-21423404,21423531-21423632,
21423721-21423774,21423880-21423972,21424526-21424618,
21427329-21427433,21427517-21427615,21427701-21427997,
21428512-21428622
Length = 407
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 352 RFCNAQRLMTGEGGYYFTNLCCAVSFIQNM 381
R CNA R E Y+F L C VS+ M
Sbjct: 113 RICNAGRFSEDEARYFFQQLICGVSYCHFM 142
>04_03_0771 + 19434460-19434987
Length = 175
Score = 30.7 bits (66), Expect = 4.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 488 PPPTTEPGPARTSEPPALLNEPSVV 512
PPP+ EP A +EP A + EP+ V
Sbjct: 116 PPPSPEPSTAAVAEPTAAVAEPAAV 140
>02_05_0183 +
26537676-26537752,26538481-26538649,26538736-26538910,
26539008-26539137,26540425-26540558,26540629-26540771,
26540894-26541092,26541183-26541514
Length = 452
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 555 PSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSDVNYDIDLSDFSADTSLAEDPPAPDRRRT 614
P P LTP CRSL+++L P P N LSD+ D D ++ E+ + R
Sbjct: 374 PEPGALTPGQCRSLEKILPPR--PRN--QLSDMELDQCEETTMHDVNIEEEMRRRQQHRR 429
Query: 615 FDPFAPQTSKDS 626
+ + +D+
Sbjct: 430 QEAYDEDDDEDA 441
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 5.4
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 484 VGSAPPPTTEPGPARTSEPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSD 543
V S PPP P P T PP L E + E + PSK +
Sbjct: 864 VSSPPPPEKSPPPPETKSPPTLTPE---ISPPPEGKSPPSHTPESSSPPSKESEPPPTPT 920
Query: 544 LKQS--SSTELLTPSPMVLTP 562
K S S E + PSP TP
Sbjct: 921 PKSSPPSHEEYVPPSPAKSTP 941
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 29.9 bits (64), Expect = 7.2
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 5/152 (3%)
Query: 488 PPPTTEPGPARTSEPPALL--NEPSVVIDETEKLNILGFEVVEERSPS-KSPQLDRLSDL 544
P + G R+++PP + +E I E + +L VV+E +PS P+ SD
Sbjct: 3516 PHALQDKGSPRSTQPPPPIESSEKESQIAEDGQTVLLQSSVVQESTPSLAGPRESSSSDS 3575
Query: 545 K-QSSSTELLTPSPMVLTPFDCRSLDEVLTPDE-FPDNIPGLSDVNYDIDLSDFSADTSL 602
S+ ++ TP + P +D V E P + G+S D S +
Sbjct: 3576 PYPSAENQVSTPKEVEPLPPTTGMMDRVQPSSEATPGVVAGISATPGDNQPSPDRESVEV 3635
Query: 603 AEDPPAPDRRRTFDPFAPQTSKDSYKLLESFD 634
AE+ + +PQ + K E D
Sbjct: 3636 AEEGTDQQKADQASVQSPQDNMGQVKETEEQD 3667
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 572 LTPDEFPDNIPGLSDVNYDIDLSDFSADTSLAEDPPAPDRRRTFDPFAPQTSKDSYKLLE 631
++P E DN G+ D + +D +D +++ S+ + R +D A QT+ D Y ++
Sbjct: 756 VSPVEIDDNHGGVVDPDPSLD-ADGNSEASMVMSSEKRKKSRKYDQKALQTNLDDYAAID 814
Query: 632 S 632
+
Sbjct: 815 N 815
>09_03_0174 - 13097138-13098265
Length = 375
Score = 29.5 bits (63), Expect = 9.5
Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 3/116 (2%)
Query: 543 DLKQSSSTELLTPSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSDVNYDIDLSDFSADTSL 602
DL + E+L P P L F DE L E I S + + S D L
Sbjct: 117 DLVTGALVEVLPPKPHALFNFVVSDGDERLFGVEAILTIKVASSIR---NSSGEWEDWKL 173
Query: 603 AEDPPAPDRRRTFDPFAPQTSKDSYKLLESFDEFSIVDNARESDPYEVVHRPDPFG 658
E P R R P LL + D R + +E++ +PD FG
Sbjct: 174 TEYHPDLPRIRVSPDTNPVLHNGLLYLLAQDGRLLVYDPCRHDNGFEILDKPDGFG 229
>06_01_1058 -
8502401-8502586,8502857-8502917,8503262-8503447,
8503531-8503720,8503861-8504212
Length = 324
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 525 EVVEERSPSKSPQLDRLS-DLKQSSSTELLTPSPMVLTPFDCRSLDE 570
E++E+ SPSK P++ + + K ++S+E+ P VL D +S DE
Sbjct: 63 EILEDASPSKDPEVQKTTIPEKATTSSEV----PRVLRSHDSKSKDE 105
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,515,096
Number of Sequences: 37544
Number of extensions: 880377
Number of successful extensions: 3076
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3042
Number of HSP's gapped (non-prelim): 45
length of query: 696
length of database: 14,793,348
effective HSP length: 87
effective length of query: 609
effective length of database: 11,527,020
effective search space: 7019955180
effective search space used: 7019955180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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