Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002823-TA|BGIBMGA002823-PA|IPR003123|Vacuolar sorting
protein 9, IPR002653|Zinc finger, A20-type, IPR013995|Vacuolar sorting
protein 9, subgroup
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 4e-16
SB_45840| Best HMM Match : zf-AN1 (HMM E-Value=1.2e-20) 42 0.002
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 35 0.25
SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 33 0.59
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.0
SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 31 2.4
SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8) 31 2.4
SB_43376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_16163| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.1
SB_27281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.1
SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12) 30 5.5
SB_14677| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_8022| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_31322| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2) 30 7.2
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 30 7.2
SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.2
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.2
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 30 7.2
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 29 9.5
>SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 83.8 bits (198), Expect = 4e-16
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 339 NPPRLISNINYVTRFCNAQRLMTGEGGYYFTNLCCAVSFIQNMTAESLSMDQKEFD 394
NP L SNI Y++RFCN +LM+GE GYYFTNLCC VSFI + A++LSM Q EF+
Sbjct: 255 NPTMLHSNIQYISRFCNPNKLMSGEAGYYFTNLCCVVSFIDKLDAQALSMTQAEFN 310
Score = 66.9 bits (156), Expect = 5e-11
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 23 RIDQNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRSDQRKSERG 82
R++ +L+CK GC ++GNP WQGYCS C RE +Q K + A + L S + + +
Sbjct: 14 RLNNPELRCKTGCGFYGNPAWQGYCSVCFREVYMKQHKTKGAQQRGAQL-LSPENEGQVE 72
Query: 83 LKLSSHASFSKFEEKRLRQSETLK 106
F+KFEEK+ ++E+ K
Sbjct: 73 QAEEVKLKFNKFEEKKKFKTESKK 96
Score = 56.8 bits (131), Expect = 5e-08
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 184 VDELSERVQKQYQRFMKHMETSQHYASVDSDARELLIDFVEKHAMTYLHELPSIVFSPSG 243
V+E+SE VQ Y + +++ + + + +D +EK+ MT L+ +VF P+
Sbjct: 109 VEEMSEMVQDFYVAIAERLQSHVLFKGQPQEILDRTLDNIEKYIMTKLYR---VVFCPAS 165
Query: 244 TDDERQDRAMSERIQQLSWVGEKHLECKLDRN 275
TDDE +D + +I+ W+ +HL+ +D +
Sbjct: 166 TDDETKDLELQRKIRSFHWITPQHLDAAIDES 197
>SB_45840| Best HMM Match : zf-AN1 (HMM E-Value=1.2e-20)
Length = 187
Score = 41.5 bits (93), Expect = 0.002
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 26 QNDLKCKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASS 66
Q C+NGC ++GN G CSKC ++ ++R++ + A++
Sbjct: 13 QQPTLCRNGCGFYGNSATDGMCSKCWKDVLRRKQSSPTANT 53
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 34.7 bits (76), Expect = 0.25
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 34 GCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTS 69
GC FG P +G C KC + Q+Q + E F+S
Sbjct: 1043 GCLKFGTPAKKGMCEKCFNKYQQKQAQKETQGPFSS 1078
Score = 34.3 bits (75), Expect = 0.34
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 30 KC-KNGCDYFGNPQWQGYCSKCHREQMQ 56
KC + GC +G P+ GYCSKC + M+
Sbjct: 1121 KCVRPGCQMYGAPETNGYCSKCLMDNMR 1148
Score = 33.1 bits (72), Expect = 0.77
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 30 KCKNG-CDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTSTLPRS 74
KC+N C +FG P G CS C+R TS +P S
Sbjct: 627 KCRNNDCTFFGLPSQDGLCSSCYRRFCIYMETTYGGGGNTSPIPPS 672
Score = 31.1 bits (67), Expect = 3.1
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 31 CKNGCDYFGNPQWQGYCSKCHREQMQRQRKAEKASSF 67
C GC ++ + CSKC E ++++ A K +
Sbjct: 303 CSQGCTFYATAETAFLCSKCLNEYLRKEGMANKGGGY 339
>SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38)
Length = 1215
Score = 33.5 bits (73), Expect = 0.59
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 51 HREQMQRQRKAEKASSFTSTLPRSDQRKSERGLKLSSHASFSKFEEKRLRQSETLKKTNL 110
HR Q+ +R ++ A + T L + Q S + L L+ A +FEE E L + +
Sbjct: 690 HRYQLMGRRASDGADALTQFLQQRCQNSSSQELDLAGTAQEEEFEEAPEIHQEPLLQQEM 749
Query: 111 LKFNV 115
K N+
Sbjct: 750 QKLNI 754
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 32.7 bits (71), Expect = 1.0
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 486 SAPPPTTEPGPARTSEPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLK 545
SAPPP T P T+ PP + P ET L +P++ P ++S+
Sbjct: 111 SAPPPPTTTAPPATTSPPTTTDSPPTTAAET-----LPPTDAPTEAPTEPPTEKKISNAV 165
Query: 546 QSSSTELLTPSPMVLTP 562
+ L TP+ TP
Sbjct: 166 TETRDLLGTPADEGTTP 182
>SB_38797| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 308
Score = 31.5 bits (68), Expect = 2.4
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 574 PDEFPDNIPGLSDVNYDIDLSDF--SADTSLAEDPPAPDRRRTFDPFAPQTSKDSYKLLE 631
P E ++P + VN D + S+ +AE P P + T D P+ K+ +L+
Sbjct: 52 PSEEETSVPSVV-VNGDSHQEEVVQSSAEVVAESAPPPAQTETEDTTTPEEVKELSNVLD 110
Query: 632 SFDEFSIVDNARESDPYEVVHRPDPFGSVLDNDEGRASILDDSGSPTAACLLPSPIQPQN 691
D E+ P V P+P V+ P+ A P+P +P
Sbjct: 111 EQDTKPEEPAEAETAPEAVESVPEPAHEVVSESAPTEPPKPTEPEPSPAEPEPTPAEP-- 168
Query: 692 SAKPT 696
S++PT
Sbjct: 169 SSQPT 173
>SB_15610| Best HMM Match : DUF1174 (HMM E-Value=7.8)
Length = 200
Score = 31.5 bits (68), Expect = 2.4
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 574 PDEFPDNIPGLSDVNYDIDLSDF--SADTSLAEDPPAPDRRRTFDPFAPQTSKDSYKLLE 631
P E ++P + VN D + S+ +AE P P + T D P+ K+ +L+
Sbjct: 52 PSEEETSVPSVV-VNGDSHQEEVVQSSAEVVAESAPPPAQTETEDTTTPEEVKELSNVLD 110
Query: 632 SFDEFSIVDNARESDPYEVVHRPDPFGSVLDNDEGRASILDDSGSPTAACLLPSPIQPQN 691
D E+ P V P+P V+ P+ A P+P +P
Sbjct: 111 EQDTKPEEPAEAETAPEAVESVPEPAHEVVSESAPTEPPKPTEPEPSPAEPEPTPAEP-- 168
Query: 692 SAKPT 696
S++PT
Sbjct: 169 SSQPT 173
>SB_43376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 486 SAPPPTTEPGPARTSEPPALLNEPSVVID-ETEKLNILGFEVVEERSPSK 534
+AP PTT P + P +L +P +V + E+ +N+L E R PS+
Sbjct: 144 AAPTPTTPPTDSGLKTPAPILPDPDLVAEVESGPVNLLRPSTREIRRPSR 193
>SB_16163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 7 LQRSYKYMITSKMPSLRIDQNDLKCKNGCDYFGNPQ-WQGYCSKCHREQMQRQRKAEKAS 65
L +K M+T L D K + ++FG+ + + S+C +E M+RQ K EK
Sbjct: 656 LVEMHKNMVTMFKDVLEFFCMDPKKTSMEEFFGDLKTFMDQYSQCKKENMKRQEKEEKEK 715
Query: 66 SFTSTLPRSDQRKS 79
+ +RKS
Sbjct: 716 RAKERAEKEKERKS 729
>SB_27281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 56 QRQRKAEKASSFTSTLP-RSDQRKSERGLKLSSHASFSKFEEKRLRQSETLKKT 108
Q++R AEK + + E L HA+ ++ EEK+L Q T KKT
Sbjct: 382 QKERTAEKGEELLKRVKDQFSGYDFENRLGFRVHAALARIEEKKLSQPSTRKKT 435
>SB_43647| Best HMM Match : VPS9 (HMM E-Value=1.1e-12)
Length = 849
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 339 NPPRLISNINYVTRFCNAQRLMTGEGGYYFTNLCCAVSFIQNMTAESLSMDQ 390
N P LIS I Y+ ++ N T E GYY ++ A +I + L Q
Sbjct: 436 NVPHLISTITYLKQYSNPNLGFT-EAGYYLASIEFACQYILRLRETDLCSKQ 486
>SB_14677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 486 SAPPPTTEPGPARTSEPPALLNEPSVVID-ETEKLNILGFEVVEERSPSK 534
+AP PTT P + P +L +P +V + E+ N+L E R PS+
Sbjct: 276 AAPTPTTPPTDSGLKTPAPILPDPDLVAEVESGPANLLRRSTREIRRPSQ 325
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 30.3 bits (65), Expect = 5.5
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 546 QSSSTELLTPSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSDVNYDIDLSDFSADTSLAED 605
QSSS+ ++P P V VL+P+ D I D SD S+ S
Sbjct: 2498 QSSSSTTMSPQPSVPNEHPAVPRRNVLSPESSDDVIQMPESSEVRADASDHSSVQS---- 2553
Query: 606 PPAPDRRRTFDPFAPQTSKDSYKLLE--SFDEFSIVDNARESDPYEVVHRPD 655
P P R P +P S S K LE S + F +D A S P +V D
Sbjct: 2554 -PQPSGSRVSQPLSP--SCPSTKELEGASVERFRSLDIASPS-PSDVAAAMD 2601
>SB_8022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 30.3 bits (65), Expect = 5.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 541 LSDLKQSSSTELLTPSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSD 586
L DL++ + L P +TP +D +LT ++ +PGLSD
Sbjct: 28 LIDLEEINQLTFLITEPTRVTPTSKTLIDVILTNEKDMSRLPGLSD 73
>SB_31322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 30.3 bits (65), Expect = 5.5
Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 19/169 (11%)
Query: 488 PPPTTEPGPARTSEPPAL-LNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQ 546
P P + ++T PP NE S+ + + N R ++ P R+S
Sbjct: 236 PEPLEKISRSKTYAPPEQPFNETSIHRQDFMRFN------QPPRPTARQPDKIRMSGSMD 289
Query: 547 SSSTELLTPSPMVLTPFDCRSLDEVLTPDEFPDNIPGLSDVNYDIDLSDFSADTSLAEDP 606
++T L +P + P + DE + P++ P S + D DF A
Sbjct: 290 KTTTNLTYFTPKEIPPKMEKKRDEYVAPEQ-----PFSSTSIFKTDYQDFRNAPKAAMYR 344
Query: 607 PAPDRRRTFDPFAPQTSKDSYKLLESFDEFSIVDNARESDPYEVVHRPD 655
P D T P +T+K++ F ++ + AR+ E RPD
Sbjct: 345 PISDLFATDKPMQRETTKNA-----DFQQWRV--EARKQKSPERYQRPD 386
>SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2)
Length = 497
Score = 29.9 bits (64), Expect = 7.2
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 495 GPARTSEPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQSSSTE 551
GP RTS PP L S I+++++L+ E+S + Q+ R D K S E
Sbjct: 124 GPPRTSMPPKALTTVSTSIEQSDQLDSKSQNEASEKS-GDARQVKRSVDKKASVRDE 179
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 29.9 bits (64), Expect = 7.2
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 489 PPTTEPGPART--SEPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQ 546
PP P A T S +L + PS+ + I G +V SP ++ L R S LK+
Sbjct: 402 PPLPRPSSAGTIGSSRASLPSSPSMGKPSGQNGTITGQGMVRNGSPVQNSYLRRPSPLKR 461
Query: 547 SSSTELLTPSPM 558
S S+ T +P+
Sbjct: 462 SLSSHEGTTNPL 473
>SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 35 CDYFGNPQWQGYCSKCHREQMQRQRKAEKASSFTST 70
C +G + YC KC +Q Q +R+ AS F T
Sbjct: 217 CPMYGYSLCKKYCRKCRSDQQQEKRELPLASVFGFT 252
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 29.9 bits (64), Expect = 7.2
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 576 EFPDNIPGLSDVNYDIDLSDFSADTSLAE--DPPAPDRRRTFDPFAPQTSKDSYKLLESF 633
EF DN +S+ YD++ +F + L+E D AP + D P S S +
Sbjct: 1468 EFTDNTNHISNDTYDLNKEEFPQECLLSEGGDDLAPAKP---DAETPAESPGSV-IEPGV 1523
Query: 634 DEFSIVDNARESDPYEVVHRPDPFGSVLDNDEGRASILDDSGSPTAACLLPSPIQPQNSA 693
+ ESDP + PD + SI+ D + A + SP+ P S+
Sbjct: 1524 NVAPSSSPVNESDPLPITAPPDAAAATGGGISPAVSIIQD--NLEAFVMSDSPVGPSRSS 1581
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 29.9 bits (64), Expect = 7.2
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 489 PPTTEPGPART--SEPPALLNEPSVVIDETEKLNILGFEVVEERSPSKSPQLDRLSDLKQ 546
PP P A T S +L + PS+ + I G +V SP ++ L R S LK+
Sbjct: 565 PPLPRPSSAGTIGSSRASLPSSPSMGKPSGQNGTITGQGMVRNGSPVQNSYLRRPSPLKR 624
Query: 547 SSSTELLTPSPM 558
S S+ T +P+
Sbjct: 625 SLSSHEGTTNPL 636
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 49 KCHREQMQRQRKAEKAS-SFTSTLPRSDQRKSERGLKLSSHASFSKFEEKRLRQSETLKK 107
+ H+E+ Q +R EK S RS +++S + + EE+R + + +K
Sbjct: 440 RSHKERSQEKRSHEKRPHEERSHKERSQEKRSHEKRPHEERSHEERSEEERTHEERSHRK 499
Query: 108 TNLLKFNVFKKNITDDHEISTERRQ 132
++ K ++ KK+ D + +R+
Sbjct: 500 YHMRKDHMKKKHKRKDQKRKYHKRK 524
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,319,392
Number of Sequences: 59808
Number of extensions: 997258
Number of successful extensions: 2981
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2957
Number of HSP's gapped (non-prelim): 34
length of query: 696
length of database: 16,821,457
effective HSP length: 87
effective length of query: 609
effective length of database: 11,618,161
effective search space: 7075460049
effective search space used: 7075460049
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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