GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002822-TA|BGIBMGA002822-PA|undefined
         (175 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   4.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   4.3  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   4.3  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   4.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   9.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   9.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.9  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 22  HHNTRFFQEREDY-LKKNLPEGQ 43
           HHN ++F E E +   + LPE Q
Sbjct: 93  HHNEKYFPEPEKFDPNRYLPENQ 115


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)

Query: 72   EWYKKNLSYKTR 83
            E+YKK +SYK+R
Sbjct: 2379 EFYKKVVSYKSR 2390


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 77  NLSYKTRLHCLHHGSKTSEGKDLAAFMEDIHSN 109
           N S    L+CL+ G      K L    ++ H N
Sbjct: 243 NTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFN 275


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 46  LSADEMSVFYKAFL 59
           LSA ++ VF+K FL
Sbjct: 161 LSASDLGVFFKRFL 174


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)

Query: 120 SISSRKYRQNDASISDCRQHGKWLAHK 146
           S   R Y  N +SIS+C+ +G+ + +K
Sbjct: 27  SFFGRTYN-NISSISECKNNGECVINK 52


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 77  NLSYKTRLHCLHHGSKTSEGKDLAAFMEDIHSN 109
           N S    L+CL+ G      K L    ++ H N
Sbjct: 32  NTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFN 64


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 77  NLSYKTRLHCLHHGSKTSEGKDLAAFMEDIHSN 109
           N S    L+CL+ G      K L    ++ H N
Sbjct: 32  NTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFN 64


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/25 (36%), Positives = 10/25 (40%)

Query: 139 HGKWLAHKDSLGQQICPESHSQLQR 163
           HGKW            P S SQ Q+
Sbjct: 282 HGKWERETGHNAPLYSPSSDSQYQK 306


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query: 112 VRAGSSQYSISSRKYRQNDASIS 134
           ++ G  +YS++   +R ND  ++
Sbjct: 293 LKIGEIKYSVNKLIFRSNDPKVT 315


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 114 AGSSQYSISSRKYRQNDASISDCRQ 138
           A +++Y  S+     +D S+S C Q
Sbjct: 116 ATATEYKYSAAAPGPSDPSVSSCHQ 140


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.130    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,178
Number of Sequences: 317
Number of extensions: 1840
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 175
length of database: 114,650
effective HSP length: 53
effective length of query: 122
effective length of database: 97,849
effective search space: 11937578
effective search space used: 11937578
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)