GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002822-TA|BGIBMGA002822-PA|undefined
         (175 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-279|AAF45683.1|  176|Drosophila melanogaster CG14806-PA...   100   9e-22
AY058585-1|AAL13814.1|  763|Drosophila melanogaster LD28027p pro...    31   1.1  
AE014297-270|AAF52011.1|  763|Drosophila melanogaster CG10018-PA...    31   1.1  
AY051704-1|AAK93128.1|  681|Drosophila melanogaster LD24550p pro...    30   1.5  
AE014297-2471|AAS65167.1|  603|Drosophila melanogaster CG7156-PB...    30   1.5  
AE014297-2470|AAF55518.1|  681|Drosophila melanogaster CG7156-PA...    30   1.5  
AE014297-1210|AAF54562.4| 1483|Drosophila melanogaster CG4509-PB...    30   2.0  
AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p pro...    29   3.5  
AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-P...    29   3.5  
AE014296-669|AAF47779.2|  942|Drosophila melanogaster CG14973-PA...    29   4.6  
AY052057-1|AAK93481.1|  452|Drosophila melanogaster LP08566p pro...    28   8.1  
AE014298-2402|AAF48607.1|  395|Drosophila melanogaster CG4394-PB...    28   8.1  
AE014298-2401|AAF48608.2|  452|Drosophila melanogaster CG4394-PC...    28   8.1  
AE014298-2400|AAN09408.1|  474|Drosophila melanogaster CG4394-PA...    28   8.1  

>AE014298-279|AAF45683.1|  176|Drosophila melanogaster CG14806-PA
           protein.
          Length = 176

 Score =  100 bits (240), Expect = 9e-22
 Identities = 41/82 (50%), Positives = 56/82 (68%)

Query: 1   MEKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLD 60
           + ++ R  R EV+ +N  FWT HN RF++E+ED+++ +   G   +SAD+MS FYKAFLD
Sbjct: 77  LARSLRLKRIEVEAWNTDFWTKHNKRFYEEKEDFIRLHKESGTSEVSADQMSHFYKAFLD 136

Query: 61  KNWKAHISYNIEWYKKNLSYKT 82
           KNW+ HI YNI WY KN    T
Sbjct: 137 KNWRIHIMYNISWYLKNFDILT 158


>AY058585-1|AAL13814.1|  763|Drosophila melanogaster LD28027p
           protein.
          Length = 763

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/44 (34%), Positives = 19/44 (43%)

Query: 19  FWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDKN 62
           FW H N         Y+ KN     Q+ S D      +AFL+KN
Sbjct: 391 FWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKN 434


>AE014297-270|AAF52011.1|  763|Drosophila melanogaster CG10018-PA
           protein.
          Length = 763

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/44 (34%), Positives = 19/44 (43%)

Query: 19  FWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDKN 62
           FW H N         Y+ KN     Q+ S D      +AFL+KN
Sbjct: 391 FWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAVDLVRAFLEKN 434


>AY051704-1|AAK93128.1|  681|Drosophila melanogaster LD24550p
           protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 2   EKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDK 61
           E+T  E + +  E   +      T     + DYL+   P    ++ +D+    Y+A L+ 
Sbjct: 193 EQTNNESQAKETEIELETKQEPKTDVALTKRDYLRLLTP--MASIESDDSDYIYEAALEF 250

Query: 62  NWKAHISYNIEWYKKNLSYKTRLHCLHHGSKTSEGKD 98
           +       N+E+ + +  YK  +  L +G+K    ++
Sbjct: 251 SHAVQAEVNLEYAEAHERYKHGVDLLLNGAKQDSSEE 287


>AE014297-2471|AAS65167.1|  603|Drosophila melanogaster CG7156-PB,
           isoform B protein.
          Length = 603

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 2   EKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDK 61
           E+T  E + +  E   +      T     + DYL+   P    ++ +D+    Y+A L+ 
Sbjct: 115 EQTNNESQAKETEIELETKQEPKTDVALTKRDYLRLLTP--MASIESDDSDYIYEAALEF 172

Query: 62  NWKAHISYNIEWYKKNLSYKTRLHCLHHGSKTSEGKD 98
           +       N+E+ + +  YK  +  L +G+K    ++
Sbjct: 173 SHAVQAEVNLEYAEAHERYKHGVDLLLNGAKQDSSEE 209


>AE014297-2470|AAF55518.1|  681|Drosophila melanogaster CG7156-PA,
           isoform A protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 2   EKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDK 61
           E+T  E + +  E   +      T     + DYL+   P    ++ +D+    Y+A L+ 
Sbjct: 193 EQTNNESQAKETEIELETKQEPKTDVALTKRDYLRLLTP--MASIESDDSDYIYEAALEF 250

Query: 62  NWKAHISYNIEWYKKNLSYKTRLHCLHHGSKTSEGKD 98
           +       N+E+ + +  YK  +  L +G+K    ++
Sbjct: 251 SHAVQAEVNLEYAEAHERYKHGVDLLLNGAKQDSSEE 287


>AE014297-1210|AAF54562.4| 1483|Drosophila melanogaster CG4509-PB
           protein.
          Length = 1483

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 75  KKNLSYKTRLHCLHHGSKTSEGKDLAAFMEDIHSNSIVRAGSSQYSISSRKYRQNDA 131
           K N + K  LH   H S+T+   D   +MED+  N  + AG  ++   +R  RQ  A
Sbjct: 606 KHNRTAKDDLHLNFHNSRTNLINDRDVYMEDVIENRDL-AGDREHITRTRVNRQEYA 661


>AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p
           protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 82  TRLH-CLHHGSKTSEGKDLAAFMEDIHSN 109
           TRLH   HHG KTS G +L+A ++   +N
Sbjct: 481 TRLHQSAHHGKKTSVGSELSATVDVAPAN 509


>AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-PA
           protein.
          Length = 1059

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 82  TRLH-CLHHGSKTSEGKDLAAFMEDIHSN 109
           TRLH   HHG KTS G +L+A ++   +N
Sbjct: 481 TRLHQSAHHGKKTSVGSELSATVDVAPAN 509


>AE014296-669|AAF47779.2|  942|Drosophila melanogaster CG14973-PA
           protein.
          Length = 942

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%)

Query: 20  WTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDKNWKAHISYNIEWYKKNLS 79
           W  HNT+  ++R   L++  P    N   +  S +  + LD+      S +IE    +  
Sbjct: 679 WVQHNTQQLEQRN--LQQAPPTSDSNSGTERQSSY--STLDRM----DSISIEKLSMDSG 730

Query: 80  YKTRLHCLHHGSKTSEGKDLAAFMEDIHSNSI 111
           YKT    L +G      +D  +   DI SNS+
Sbjct: 731 YKTTPQQLTNGYPEKSTEDSLSPKTDITSNSL 762


>AY052057-1|AAK93481.1|  452|Drosophila melanogaster LP08566p
           protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 29  QEREDYLKKNLPEGQQNLS--ADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSYKTRLHC 86
           +ER D L + L +  QN+S    +M++  +    +N + H+ + I+ Y K L    +   
Sbjct: 274 EERCDKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGHLIWRIKDYSKKLEESKQYDT 333

Query: 87  LHHGSKTSEGKDLAAFMEDIHSN 109
           + H +  S      A   DI+ N
Sbjct: 334 ILHSAMFSNKAFGYALRLDIYLN 356


>AE014298-2402|AAF48607.1|  395|Drosophila melanogaster CG4394-PB,
           isoform B protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 29  QEREDYLKKNLPEGQQNLS--ADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSYKTRLHC 86
           +ER D L + L +  QN+S    +M++  +    +N + H+ + I+ Y K L    +   
Sbjct: 217 EERCDKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGHLIWRIKDYSKKLEESKQYDT 276

Query: 87  LHHGSKTSEGKDLAAFMEDIHSN 109
           + H +  S      A   DI+ N
Sbjct: 277 ILHSAMFSNKAFGYALRLDIYLN 299


>AE014298-2401|AAF48608.2|  452|Drosophila melanogaster CG4394-PC,
           isoform C protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 29  QEREDYLKKNLPEGQQNLS--ADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSYKTRLHC 86
           +ER D L + L +  QN+S    +M++  +    +N + H+ + I+ Y K L    +   
Sbjct: 274 EERCDKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGHLIWRIKDYSKKLEESKQYDT 333

Query: 87  LHHGSKTSEGKDLAAFMEDIHSN 109
           + H +  S      A   DI+ N
Sbjct: 334 ILHSAMFSNKAFGYALRLDIYLN 356


>AE014298-2400|AAN09408.1|  474|Drosophila melanogaster CG4394-PA,
           isoform A protein.
          Length = 474

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 29  QEREDYLKKNLPEGQQNLS--ADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSYKTRLHC 86
           +ER D L + L +  QN+S    +M++  +    +N + H+ + I+ Y K L    +   
Sbjct: 296 EERCDKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGHLIWRIKDYSKKLEESKQYDT 355

Query: 87  LHHGSKTSEGKDLAAFMEDIHSN 109
           + H +  S      A   DI+ N
Sbjct: 356 ILHSAMFSNKAFGYALRLDIYLN 378


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.130    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,928,195
Number of Sequences: 52641
Number of extensions: 359603
Number of successful extensions: 1021
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1018
Number of HSP's gapped (non-prelim): 14
length of query: 175
length of database: 24,830,863
effective HSP length: 80
effective length of query: 95
effective length of database: 20,619,583
effective search space: 1958860385
effective search space used: 1958860385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)