Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002822-TA|BGIBMGA002822-PA|undefined
(175 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-31|CAD31827.1| 142|Caenorhabditis elegans Hypothetical... 69 1e-12
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 33 0.085
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 33 0.085
Z99281-22|CAE18022.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.11
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 2.4
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 2.4
Z46266-5|CAA86412.1| 375|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z49909-2|CAB60994.1| 375|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF058329-1|AAD20727.1| 375|Caenorhabditis elegans unknown protein. 28 4.2
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 27 5.6
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 27 7.4
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 27 7.4
AC090999-10|AAK26141.2| 251|Caenorhabditis elegans Hypothetical... 27 7.4
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z70309-9|CAH10784.1| 323|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 27 9.7
U23168-11|AAC38811.2| 454|Caenorhabditis elegans Hypothetical p... 27 9.7
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 27 9.7
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 27 9.7
>AL132948-31|CAD31827.1| 142|Caenorhabditis elegans Hypothetical
protein Y39B6A.34 protein.
Length = 142
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 1 MEKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNLPE-GQ-QNLSADEMSVFYKAF 58
+E+ YR R E+ ++N FW HN F +++ D++++ E G+ +++SA+E+S FY+ F
Sbjct: 43 LERQYRLAREELNQWNSDFWAEHNQLFDRQKSDFVERKQQELGRLEHVSANELSEFYRDF 102
Query: 59 LDKNWKAHISYNIEWYKKNL 78
L+ A ++YN EWY++NL
Sbjct: 103 LNDRHVAMMAYNKEWYRRNL 122
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 33.5 bits (73), Expect = 0.085
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 1 MEKTYREMRTEVQEFNQKFWTHHN-TRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAF 58
+E+ REMR Q + + + N TR + +D K L E Q +LSA ++S +YK F
Sbjct: 1426 LEEFLREMREYWQNYEVELVNYQNKTRLIKGWDDLFNK-LKEHQNSLSAMKLSPYYKQF 1483
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 33.5 bits (73), Expect = 0.085
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 1 MEKTYREMRTEVQEFNQKFWTHHN-TRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAF 58
+E+ REMR Q + + + N TR + +D K L E Q +LSA ++S +YK F
Sbjct: 1426 LEEFLREMREYWQNYEVELVNYQNKTRLIKGWDDLFNK-LKEHQNSLSAMKLSPYYKQF 1483
>Z99281-22|CAE18022.1| 214|Caenorhabditis elegans Hypothetical
protein Y57G11C.39 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 2 EKTYREMRTEVQEFNQKFWTHH--NTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFL 59
EK +R ++ EF+Q+ +HH N++F ER + KNLPE + LS +
Sbjct: 97 EKQTAGVRADIMEFHQRL-SHHVDNSKFRVER---IIKNLPEALRKLSEIVQDIDITRLQ 152
Query: 60 DKNWKAHISYNIE 72
+KN A++ ++E
Sbjct: 153 EKNRIANLYTSLE 165
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 33 DYLKKNLPEGQQNLSADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSYKTRLHCLHHGS 91
DYLK++ EG +LS + S+ A AH S + LS ++R H H GS
Sbjct: 4191 DYLKQDAEEGYNSLSRNRRSLSASALAANREAAHQSSSYLQTGGTLS-RSRHHMSHAGS 4248
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 33 DYLKKNLPEGQQNLSADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSYKTRLHCLHHGS 91
DYLK++ EG +LS + S+ A AH S + LS ++R H H GS
Sbjct: 4191 DYLKQDAEEGYNSLSRNRRSLSASALAANREAAHQSSSYLQTGGTLS-RSRHHMSHAGS 4248
>Z46266-5|CAA86412.1| 375|Caenorhabditis elegans Hypothetical
protein C07B5.5 protein.
Length = 375
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 59 LDKNWKAHISYNIEWYKKNLSYKTRLHCLHHGSKTSEGKDLAAFMEDIHSNSIVRAGSSQ 118
LD N +A I+Y ++ Y + KT H +++ +E+I SN + + +
Sbjct: 77 LDDNDQA-IAYTLQQYYDKQNDKTIFHVMYNDEPWGSKSTSGIKLEEILSNRVYSNYTHE 135
Query: 119 YSISSRKYRQNDASISDCRQHGKWLAH 145
+S + +I G WL H
Sbjct: 136 DDSTSTAFGHTKGTIFFDGTSGVWLVH 162
>Z49909-2|CAB60994.1| 375|Caenorhabditis elegans Hypothetical
protein C14A4.2 protein.
Length = 375
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 27 FFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSY 80
F +E +Y++ +P N + E Y +++KNW A + E +K L +
Sbjct: 306 FGEEGFEYVEPFVPIETSNYTEAETDAIYNYYVNKNWLASKAARSEEGRKQLMH 359
>AF058329-1|AAD20727.1| 375|Caenorhabditis elegans unknown protein.
Length = 375
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 27 FFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDKNWKAHISYNIEWYKKNLSY 80
F +E +Y++ +P N + E Y +++KNW A + E +K L +
Sbjct: 306 FGEEGFEYVEPFVPIETSNYTEAETDAIYNYYVNKNWLASKAARSEEGRKQLMH 359
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 27.5 bits (58), Expect = 5.6
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 1 MEKTYREMRTEVQEFNQKFWT----HHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYK 56
+EK YR +QE ++K T H + R+F D LK + + L V +
Sbjct: 359 LEKVYRTSNARIQENHEKSMTQIISHRSVRYFARFSD-LKHRRKKKKLYLHEHRQKVNSR 417
Query: 57 AFLDKNWKAHISYNIEWYKKNLSYKTR 83
+N K + ++ +K LSY R
Sbjct: 418 I---RNVKLYFAWRFVAHKARLSYFAR 441
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 105 DIHSNSIVRAGSSQYSISSRKYRQNDASISD 135
DIH + I RKYR+ND ++D
Sbjct: 7 DIHLEKLAENIQKYSKIEERKYRENDMHVND 37
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 105 DIHSNSIVRAGSSQYSISSRKYRQNDASISD 135
DIH + I RKYR+ND ++D
Sbjct: 58 DIHLEKLAENIQKYSKIEERKYRENDMHVND 88
>AC090999-10|AAK26141.2| 251|Caenorhabditis elegans Hypothetical
protein Y82E9BR.13 protein.
Length = 251
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 8 MRTEVQEF---NQKFWTHHNTRFFQEREDYLKKNLPEGQQNLSADEMSVFYKAFLDKNWK 64
M E EF N+K +++ N F + RE+ + KN + +++L + +K L+ K
Sbjct: 52 MEPEYYEFKPGNRKLYSNKNGAFQKTREEEMLKNFEDEREHLEQEHNLKIHK--LENKRK 109
Query: 65 AHISY 69
+I++
Sbjct: 110 NYIAF 114
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 110 SIVRAGSSQYSISSRKYRQNDASISDCRQHGKWLAHKDSLGQQICPESHSQLQRYFKSYF 169
S++ G Y+ S +YR + D G W ++ QQ+CP R +S+
Sbjct: 242 SLMPVGWLWYAYKSYEYRCDGIVFVD----GSWFPRDKTIQQQVCPTCVLYYGRITESFM 297
Query: 170 FNVI 173
+V+
Sbjct: 298 ADVV 301
>Z70309-9|CAH10784.1| 323|Caenorhabditis elegans Hypothetical
protein R102.10 protein.
Length = 323
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 67 ISYNIEWYKKNLSYKTRLHCLHHGSKT--SEGKDLAAFMEDIHSNS 110
+SY I W KN S KT + +KT S+ K + + + D S +
Sbjct: 79 LSYTITWLDKNASKKTDKASIKSSTKTRDSQRKSVTSSLSDDSSET 124
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 26.6 bits (56), Expect = 9.7
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 74 YKKNLSYKTRLHCLHHGSKT---SEGKDLAAF----MEDIHSNSIVRAGSSQYSISSRKY 126
Y +N+ +KT C + T SEG L F M+D+ N A S+ S
Sbjct: 16 YNQNI-HKTSSRCSAPNATTYLRSEGTRLMEFSTKVMKDVTLNECANACSNSLSTEECLS 74
Query: 127 RQNDASISDCRQH 139
+ DASI C H
Sbjct: 75 FEYDASILQCSHH 87
>U23168-11|AAC38811.2| 454|Caenorhabditis elegans Hypothetical
protein B0228.8 protein.
Length = 454
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 14 EFNQKFWTHHNTRFFQEREDY----LKKNLPEGQQNLSADEMSVFYKAFLDKNWKAHISY 69
+F+ +T+ +F+ D+ +++N E + +S + SV A + W ++
Sbjct: 303 QFSMNKYTNVKVEYFENFLDWRIYQIQQNCTESRTKMSKSDASVVKMALASRRWDQMLNK 362
Query: 70 NIEW 73
+ W
Sbjct: 363 GLSW 366
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 110 SIVRAGSSQYSISSRKYRQNDASISDCRQHGKWLAHKDSLGQQICPESHSQLQRYFKSYF 169
S++ G Y+ S +YR + D G W ++ QQ+CP R +S+
Sbjct: 242 SLMPVGWLWYAYKSYEYRCDGIVFVD----GSWFPRDKTIQQQVCPTCVLYYGRITESFM 297
Query: 170 FNVI 173
+V+
Sbjct: 298 ADVV 301
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 110 SIVRAGSSQYSISSRKYRQNDASISDCRQHGKWLAHKDSLGQQICPESHSQLQRYFKSYF 169
S++ G Y+ S +YR + D G W ++ QQ+CP R +S+
Sbjct: 158 SLMPVGWLWYAYKSYEYRCDGIVFVD----GSWFPRDKTIQQQVCPTCVLYYGRITESFM 213
Query: 170 FNVI 173
+V+
Sbjct: 214 ADVV 217
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.130 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,604,850
Number of Sequences: 27539
Number of extensions: 187684
Number of successful extensions: 508
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 498
Number of HSP's gapped (non-prelim): 21
length of query: 175
length of database: 12,573,161
effective HSP length: 77
effective length of query: 98
effective length of database: 10,452,658
effective search space: 1024360484
effective search space used: 1024360484
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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