Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002820-TA|BGIBMGA002820-PA|IPR001401|Dynamin,
IPR006884|Fzo-like conserved region
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 55 4e-08
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 36 0.028
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 35 0.049
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 33 0.20
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 32 0.26
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 31 0.45
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 31 0.45
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 31 0.45
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 30 1.4
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 30 1.4
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 30 1.4
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 30 1.4
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 30 1.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 1.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.8
SPCC4G3.17 |||HD domain|Schizosaccharomyces pombe|chr 3|||Manual 29 3.2
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 28 4.2
SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual 28 4.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 5.6
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 5.6
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 27 7.4
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 27 7.4
SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyc... 27 7.4
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 27 7.4
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 27 9.8
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 27 9.8
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 9.8
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 9.8
SPBC36B7.06c |mug20||sequence orphan|Schizosaccharomyces pombe|c... 27 9.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 9.8
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 54.8 bits (126), Expect = 4e-08
Identities = 82/374 (21%), Positives = 147/374 (39%), Gaps = 53/374 (14%)
Query: 105 KVAFFGRTSNGKSTVINAMLHDKILPSGIGHTTNCFLQVEGSDTNEA------------Y 152
K+ G + GKST+ NA++H ILP T F +V ++ N+ Y
Sbjct: 156 KILITGDLNAGKSTLCNALVHKDILPEDQQPCTEVFCEVHDAELNDGKDCVHAIPHGLTY 215
Query: 153 MRTEGCEEKLNVQSVSQLGHALCATRLQECSLVHVHWPRELC-ALLRD---DVVLVDSPG 208
T+ K V + L + T +V+V+ R +LL + D+ L+D+PG
Sbjct: 216 SHTDSSTYK--VFPIEDLKRLVYETENWSMLIVYVNDGRPAHESLLHNGITDIALIDAPG 273
Query: 209 VDVTPNLDTWIDKYCLDADVFVLVANAESTLMVTEKNFFHKVSTKISQPNIFILNNRWDA 268
++ T + + DV V V NAE+ ++ +F ST+ S +IFI+ N++D
Sbjct: 274 LNTDSMKTTSVFACQEEIDVVVFVVNAENHFTLSATDFLRNASTEKS--HIFIIVNKFD- 330
Query: 269 SASEPEYMEQVRTQHANRCVDFLSRELRVCSP---KEAEERIFFISAKEALLTRMRDREK 325
+R + RC + ++ SP +A++ + F+S + A RD
Sbjct: 331 ---------NIRDK--ERCKRLILEQIHTLSPGTFADAKDLVHFVSCRVA-----RDPN- 373
Query: 326 PVSSPILAEGHQVRYFEFVDFERKFEECISQSAVRTKFAQHSRRGKNIAGDVMAALDRVY 385
Y F E I ++ ++K A R + GD++ + Y
Sbjct: 374 --------NREDALYSSFFQMENSLRSFILENRSKSKLAPVRRYLSGLVGDILNICE--Y 423
Query: 386 NIATEQKAAKVEKQRI--LHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEI 443
NI +QR+ L + ++ + ++ + + V+S+ L I
Sbjct: 424 NIKLIDFDINHLQQRLTDLSPKFRKVKHEQQFTYQKNESLVEATVQSISQHTHSELEDAI 483
Query: 444 RRLSALVDEYESEF 457
L + S F
Sbjct: 484 DSLGSFASVKYSGF 497
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 35.5 bits (78), Expect = 0.028
Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 23/247 (9%)
Query: 234 NAESTLMVTEKNFFHKVSTKISQPNIFILNNRWD--ASASEPEYMEQVRTQHANRCV-DF 290
N L +N F V I+ PN I+ R + E + + R +
Sbjct: 118 NGHRALQQNVQNLFQSVQLNINNPNFLIMQGRITKVLNMKATEILSMIEEASGTRMFEER 177
Query: 291 LSRELRVCSPKEAE-ERIFFISAK--EALLTRMRDREKP------VSSPILAEGHQVRYF 341
+ R KEA+ E I + + E LT++R +K + + + H +
Sbjct: 178 KEKAFRTMQRKEAKVEEINTLLREEIEPRLTKLRTEKKTFLEYQHIYNDLERLSHLCTAY 237
Query: 342 EFVDFERKFEECISQSAVR-TKFAQHSRRGKNIAGDVMAALDRVYNIATEQ-KAAKVEKQ 399
++ K EE Q++ + + A+ + +V+ +++ I E+ + V
Sbjct: 238 DYYKLSLKVEELTVQASQKHSHIAEMESSLQTSKQEVLILKEKIKKIEDERMRQMSVSSD 297
Query: 400 RILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEYESEFRP 459
R L QL ++ E +T I+ ++ K + E EH +++++ E E+ R
Sbjct: 298 RTLDSQLQTVNENITRISTSIELKNTALEE--EH-------GDLQQIRGKAKELETLLRG 348
Query: 460 ERPALEQ 466
+R L++
Sbjct: 349 KRKRLDE 355
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 34.7 bits (76), Expect = 0.049
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 299 SPKEAEERIFFISAKEALLTRMRDREKPVSSPILAEGHQVRYFEFVDFERKFEECISQSA 358
SP + F + A+L + E+ +S L E V E + E + +SQ
Sbjct: 181 SPSKRPANYKFYEQRIAMLEESLEVERSRTSE-LQEQFSVALREKAEAEAN--KIVSQKG 237
Query: 359 VRT-KFAQHSRRGKNIAGDVMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTIT 417
+ + + +S + +N MA L+ N A + A+++ Q L + S+IE++ ++
Sbjct: 238 MESLEIMLNSMKSEN--HQRMAMLEE--NHARVMETAELQHQAELQDFASNIEQKANSLI 293
Query: 418 RQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEYES 455
+ K+++ E HK+ S+ ++S L +E +S
Sbjct: 294 MEYKNELQSAEEHFSHKIKELTSENELKISRLQEEKDS 331
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 32.7 bits (71), Expect = 0.20
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 439 LSQEIRRLSALVD-------EYESEFRPERPALEQ--YKRALHRHVEAGLGSRLKKRLSS 489
L IR L+ALVD E E E P EQ Y R+L H++ + RLKK +
Sbjct: 540 LQNNIRELAALVDFLMPGKFEIREEINLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEK 599
Query: 490 DIGNEMD-VVQKEMAE-RMY---NILPTNKR 515
+ ++ + +++ E+++ +MY NIL N R
Sbjct: 600 SLPSKSERILRVELSDLQMYWYKNILTRNYR 630
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 32.3 bits (70), Expect = 0.26
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 354 ISQSAVRTKFAQHSRRGKNIAGD-VMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQ 412
+S++ Q +G +I D + + LD +Y + A +EK ++L + +S++EE+
Sbjct: 738 LSETKTELSDLQGDLQGLDIRKDEIQSELDTLY-----LRRANLEKLQLLVKDISNLEEE 792
Query: 413 LTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEYESEFRPERPALEQ--YKRA 470
+ TI R+ + + S+ H + E +L + ER LE+ +K+
Sbjct: 793 IRTIDRETEVLRIELPSSIAHHNLDEIYAEREKLLEKRGYLRKQI--ERTKLEETSFKKK 850
Query: 471 LHRHVEAGLGSRLKKRLSSDIGNEMDVVQKEMAERMYNILPTNKRAAAANYIIPHQQPFE 530
+ V A +LK + NE++ ++K++ + + K+ + Q PF
Sbjct: 851 IDDAVLANNEQKLKLTKLNFQVNELEQLEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFL 910
Query: 531 VLYRLNCDNLCADFNE 546
+ L AD E
Sbjct: 911 NELESEYEKLEADIQE 926
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 31.5 bits (68), Expect = 0.45
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 355 SQSAVRTKFAQHSRRGKNIAGDVMAALDRVYNIATEQKAAKVEKQRI------LHEQLSS 408
S S V + Q + + + A + + I T+ + K+E +++ L E+ S
Sbjct: 288 SLSIVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDLKLETEKLQDQIKALLERNQS 347
Query: 409 IEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEYESEFRPERPALEQYK 468
++E L T+ K+ + M + E ++ Q++ AL+ Y+ +FR + + +
Sbjct: 348 LQEALETVKNDEKN-LREMNANYETEMK-EARQKLNNKEALISHYDDDFRAKELKISRLS 405
Query: 469 RALHRHVEAGLGSRLKKRLSSDIGNEMDVVQKEMAE 504
+L +AGL S + + D++ +E +
Sbjct: 406 ESLRE--KAGL-----LEFQSSVSEQRDLLYQEQIQ 434
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 31.5 bits (68), Expect = 0.45
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 374 AGDVMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVES--V 431
A D++++ N ++Q+A +VE Q ++++ L R ++D+++ + S V
Sbjct: 481 ATDLLSSSSLKKNFFSQQEADEVELSNNYDLQGAAVQ-YLQRRLRMVEDELHEAINSKNV 539
Query: 432 EHKVSLTLSQEIRRLSALVDEYESEFRPERPALEQYKR 469
+ S L Q+I +L+ + EY + R + LE+ K+
Sbjct: 540 QQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKK 577
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 31.5 bits (68), Expect = 0.45
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 398 KQRILHEQLSSIEEQLTTITRQMKDKINRM--VESVEHKVSLTLSQEIR 444
K +I+ S +EEQ+ I ++ DK N + +E ++H+V+ + Q+ +
Sbjct: 860 KLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRIEQDAK 908
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 389 TEQKAAKVEKQRILHEQLSSIE-EQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLS 447
T+ K A E R L +L SIE ++ D + +++ ++ H V L +++++ S
Sbjct: 618 TDDKLALREISRQLSIELESIESDEALKSEMNFSDTLTKLLATLSHPVDLGIAEDVMTTS 677
Query: 448 ALVDEYESEF 457
A V EF
Sbjct: 678 AAVIFVLEEF 687
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 368 RRGKNIAGDVMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRM 427
+R K IA ++ D N E K K EK+ IL +Q + +LT +++++K+K +M
Sbjct: 72 KRKKLIAKGLLEPFDAEDN---EAKKMKREKE-ILRQQRQKRKSELTQLSQKVKEKFKKM 127
Query: 428 VESVEHKVSLTLSQEIRRLSALVDE 452
+ ++ + E +DE
Sbjct: 128 RKKPARRIVTIANDEEEEDDQTMDE 152
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 97 EVLKRDHMKVAFFGRTSNGKSTVINAMLHDKILPSGIGHTT 137
+VLK +VAF G S GKST+++A+ K + TT
Sbjct: 56 DVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTT 96
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 393 AAKVEKQRILHEQ-LSSIEEQLTTI-TRQMKDKINRMVESVEHKVSLTLSQEIRRLSALV 450
+AK+E++R LHE+ L +E ++ TI ++++++K +R+ +S L R + A +
Sbjct: 383 SAKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENE-----LRTRHREMKAAL 437
Query: 451 DEYESEFRPERPALEQYKRA 470
++ +++ + L Q K A
Sbjct: 438 EKQKADLIDHKNRLMQAKAA 457
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 96 REVLKRDHMKVAFFGRTSNGKSTVINAMLHDKI-LPSGIGHTTNCFLQ--VEGSDTNEAY 152
+EVL++ + VA G ++ GKS++IN + + +I + S TT ++ V+ +
Sbjct: 233 KEVLRKG-INVAILGPSNAGKSSLINLLANRRISIVSPQSGTTRDAIEVLVDINGFPVLL 291
Query: 153 MRTEGCEEKLNVQSVSQLGHALCATRLQECSLVHVHWP 190
T G + +VQ + ++G + R +E L +P
Sbjct: 292 SDTAGLRKGEDVQEIEKIGIEIAKARAEESQLTLFVFP 329
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 381 LDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVS---- 436
+ R + + QK + KQ+ L E S E+Q + TR +++++ +E + +
Sbjct: 800 IHRTFTQSFTQKQLEFTKQKSLLENRISFEKQRVSDTRLRLERMHKFIEKDQESIDNYEQ 859
Query: 437 --LTLSQEIRRLSALVDEYESEFRPERPALEQYKRALHRHVEAGLGSRLKKRLSSDIGN 493
L E+ A ++ + +F E E K L + +G RL L+ GN
Sbjct: 860 NREALESEVATAEAELELLKEDFASENSKTE--KILLAASEKKLVGKRLVSELTKLSGN 916
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 398 KQRILHEQLSSIEEQLTTITRQMKDKIN--RMVESVEHKVSLTLSQEIRRLSALVD-EYE 454
+ ++LH Q S+ +Q+T + + + +N +E+V+ L +R ++D +YE
Sbjct: 1159 QNKLLHSQFDSLSQQITVLQQNSSENLNISANLEAVQDNDLRELVSYLRHEKEIMDNKYE 1218
Query: 455 SEFRPERPALEQYKRALHRHVEAGLGSRLKKRLSSDIGNE 494
R L Q ++L V++ L L + S + N+
Sbjct: 1219 LTILDNR-GLNQQVKSLQSTVDS-LQLELNRLQSLPVSND 1256
>SPCC4G3.17 |||HD domain|Schizosaccharomyces pombe|chr 3|||Manual
Length = 198
Score = 28.7 bits (61), Expect = 3.2
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Query: 350 FEECISQ--SAVRTKFAQHSRRGKNIAGDVMAALDRVYNIATEQKAAKVE--KQRILHEQ 405
F +C+S+ + RT + H D M + + + + K K ++H+
Sbjct: 12 FLDCLSRLKTTPRTGWLYHGIEKPESIADHMYRMGILTMLCNDPSINKERCLKIAVVHDM 71
Query: 406 LSSIEEQLTTITRQMKDKINRM-----VESVEHKVSLTLSQEIRRLSALVDEYESEFRPE 460
SI +T K++ +RM V + + L LS + + L EYES PE
Sbjct: 72 AESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPE 131
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 695 HQVQQELSTMFARLCRLIDEATTEMDAELSGVRDAIKMLDDASTSAKKLRNKANYLSHEL 754
HQ L FA++ L ++ SG+ DA + L+ A + K++ + A L + L
Sbjct: 91 HQKSNHLREKFAQVLELSRHLEDNVNDMRSGLVDAGQELERAENNRKRILSSAELLRYYL 150
Query: 755 E 755
E
Sbjct: 151 E 151
>SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual
Length = 231
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 46 KKKINDIFVEIDDYVKDAVTFMHAVSGENGIATPQDMGNVESYVSKVEAIREVLKRD 102
++KI + EI K + +H S +G P+D + K+ E LKR+
Sbjct: 19 REKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFDRTSIFEKKIHKELESLKRE 75
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 5.6
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 397 EKQRILHEQLSSIEEQLTTI---TRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEY 453
E L EQ+ ++E +L + + ++ N + E + S LS + D+
Sbjct: 580 ENSNTLSEQIKNLESELNSSKIKNESLLNERNLLKEMLATSRSSILSHN-SSAGNIDDKM 638
Query: 454 ESEFRPERPALEQYKRALHRHVEAGLGSRLKKRLSSDIGNEMDVVQKEMAERMYNILPTN 513
+S R + Y+ ++R+ + L KR + D+ +EM+ ++KE+ Y +
Sbjct: 639 KSIDESTRELEKNYE--VYRNEMTAIQESLSKR-NQDLLSEMEAIRKELENSKYQQQLST 695
Query: 514 KRAAAAN 520
R AN
Sbjct: 696 DRLTNAN 702
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 404 EQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEYESEFRPERPA 463
E + EEQL + ++D +++ ++H+ E R A + EY E ER A
Sbjct: 35 EVIQRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHE-REQEARLQEYYLEQLQERRA 93
Query: 464 LEQYKRALHR 473
E R + R
Sbjct: 94 FENVVRTIIR 103
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 27.5 bits (58), Expect = 7.4
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 390 EQKAAKVE-KQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSA 448
E+K E K R + S +E +L +T + ++ NRMV + K ++ + + +L
Sbjct: 87 EEKLQLTETKCRNAESEKSRVENELEDLTSSLFEEANRMVANA-RKETVASEKRVNQLKK 145
Query: 449 LVDEYESEFRPERPALEQYKRALH 472
+ + E+ + L + K +H
Sbjct: 146 QLVDAETLLSSTQHQLTELKDVMH 169
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 284 ANRCVDFLSRELRVCSPKEAEERIFFISAKEALLTRMRDREKPVSSPILAEGHQVRYFEF 343
+NR + F S+ + SPK+ + R+F + K A + + K + +P ++ + +
Sbjct: 303 SNRSI-FFSQPGALISPKDPKLRVFPFTTKRATHSELLRCYKELVTPKISHVDSIS-IKA 360
Query: 344 VDFERKFEECISQSAVRTKFAQHSRRGKNIA 374
+ ERK + I + +++ + R+ K +A
Sbjct: 361 QEEERKRQAEIEKEIRQSRLQEEERKKKKLA 391
>SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 553
Score = 27.5 bits (58), Expect = 7.4
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 174 LCATRLQECSLVHVHWPRELCALLRDDVVLVDSPGVDVTPNLDTWIDKYCLDADVFVLVA 233
LCA+ L SL + W ++C + + VL+ VT L T I Y LD V V++A
Sbjct: 108 LCASLLGTFSLFLMGWAPDICLFIFSNEVLMKR----VTIVLAT-ISIYLLDVAVNVVMA 162
Query: 234 NAESTLM 240
+ S ++
Sbjct: 163 STRSLIV 169
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 63 AVTFMHAVSGENGIATPQDMGNVESYVSKVEAIREVLKRDHMKVAFFGRTSNGKSTV 119
A A +D ++++ V + E ++++ ++H+ + F G GKST+
Sbjct: 199 AAALKKAAEAAEPATVTEDATDLQNEVDQ-ELLKDMYGKEHVNIVFIGHVDAGKSTL 254
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 106 VAFFGRTSNGKSTVINAMLHDKILPSGIGHTTNCFLQ---VEGSDTNEAYMRTEGCEEKL 162
+ G S+GKS+V+ A++ + LP G T ++ V +DT Y G +
Sbjct: 266 IVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTLVHSADTAIPYGEFSGVQLG- 324
Query: 163 NVQSVSQLGHAL 174
+ S++ H L
Sbjct: 325 KITDFSKIQHIL 336
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 699 QELSTMFARLCRLIDEATTEMDAELSGVRDAIKMLDDASTSAKKLRNKANYLSHELELFE 758
++LS F + +DE + D R I DD T+ L N+ L E +
Sbjct: 177 KKLSDKFVEIRSELDEVRKQQDGYYKDQRKLIAERDDEKTALDDLYNQRRALQREYDTQL 236
Query: 759 EAF 761
AF
Sbjct: 237 RAF 239
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 97 EVLKRDHMKVAFFGRTSNGKSTVINAMLHDKILPSG 132
E+L ++ K+A GRT +GKST+ +L ++ SG
Sbjct: 1203 EILPKE--KIAIVGRTGSGKSTMGLTLLRFTMIMSG 1236
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 9.8
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 446 LSALVDEYESEFRPERPALEQYKRALHRHVEAGLGSRLKKRLSSDIGNEMD-VVQKEMAE 504
L++L + R L +YK A +H EA L S + L+ + G ++ VV+K M
Sbjct: 733 LASLEKSVHKNYESLRSQLLEYKAANEKHTEAIL-SVVSSTLTENTGKILESVVEKSMQV 791
Query: 505 RMYNILPTNKRAAAAN 520
+ + + R A N
Sbjct: 792 ALKEEIANSVRNALKN 807
>SPBC36B7.06c |mug20||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 169
Score = 27.1 bits (57), Expect = 9.8
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 383 RVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQE 442
RV ++ E EK R L + + L+ + + + IN +ESV K+S SQE
Sbjct: 43 RVKDVILESLRTTEEKLRALDKLQLDASKNLSNLLVEY-NSINAELESVNSKISSISSQE 101
Query: 443 --IRRLSALVDEYESEFRPER 461
+ AL +E R
Sbjct: 102 YALEEFQALSQNFEKNLVQHR 122
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 9.8
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 380 ALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTL 439
AL +I E+ ++VE ++HE+LSS+E Q+ TI + + + +S+E ++
Sbjct: 881 ALAHEKDILVERANSRVE---VVHERLSSLENQV-TIADEKYEFLYAEKQSIEEDLA-NK 935
Query: 440 SQEIRRLSALVDEYESE 456
EI LS L E +
Sbjct: 936 QTEISYLSDLSSTLEKK 952
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,117,291
Number of Sequences: 5004
Number of extensions: 124180
Number of successful extensions: 440
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 427
Number of HSP's gapped (non-prelim): 36
length of query: 766
length of database: 2,362,478
effective HSP length: 78
effective length of query: 688
effective length of database: 1,972,166
effective search space: 1356850208
effective search space used: 1356850208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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