Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002820-TA|BGIBMGA002820-PA|IPR001401|Dynamin,
IPR006884|Fzo-like conserved region
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0176 + 18749945-18749969,18750186-18750751,18750876-187509... 37 0.052
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 37 0.069
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 35 0.28
05_01_0363 - 2846133-2846441,2846820-2846885,2847184-2847276,284... 33 0.65
09_04_0505 + 18183203-18183294,18183388-18183436,18183719-181840... 33 0.85
02_05_0405 + 28708077-28708391,28708478-28708573,28709030-287094... 33 0.85
05_01_0146 - 953957-956278,956468-956786,957185-957213 33 1.1
05_07_0052 + 27340499-27340597,27340708-27340801,27341206-273414... 32 1.5
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 32 1.5
08_02_1530 + 27670400-27671008 32 2.0
04_01_0305 - 4141692-4142912 32 2.0
09_06_0347 + 22445962-22446154,22446495-22446616,22446764-224468... 31 2.6
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 31 2.6
06_01_0859 - 6506029-6506133,6506255-6506319,6506461-6506539,650... 31 3.4
03_04_0098 - 17275045-17275665 31 3.4
08_02_1529 + 27668348-27669079 31 4.5
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 31 4.5
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 31 4.5
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 4.5
01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131... 31 4.5
12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 30 6.0
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 30 6.0
08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036 30 6.0
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 30 6.0
07_01_0346 - 2501825-2501908,2502143-2502244,2502623-2502646,250... 30 7.9
04_04_1340 + 32766773-32767582 30 7.9
01_06_1261 - 35826513-35828941,35829201-35829294 30 7.9
>05_04_0176 +
18749945-18749969,18750186-18750751,18750876-18750944,
18752128-18752325,18752791-18752922,18753658-18753744,
18753845-18754288,18754644-18754811,18755129-18755359,
18755893-18756008,18756125-18756407
Length = 772
Score = 37.1 bits (82), Expect = 0.052
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 25 NGSVRVNMQNVDSPLQIFVRAKKKINDIFVEIDDYVKDAVTFMHAVSGENGIATPQDMGN 84
N S ++ D+ + + R K K+ F ++D+ V ++ + E +
Sbjct: 140 NYSSASTLEEADN-VMVLTREKAKVAG-FTKLDEKVMQLISIEKPILSEAVAVIRKAAPM 197
Query: 85 VESYVSKVEAIREVLKRDHMKVAFFGRTSNGKSTVINAMLHDKILPSGIGHTTNCFLQVE 144
+E V+A + + + G ++GKST INA+L K L G+ TTN + +
Sbjct: 198 MEEVELLVDAASRL--SEPFLLVTVGEFNSGKSTFINALLGRKYLQEGVVPTTNEIMLLS 255
Query: 145 GSDTNEAYMRTEGCEEKLNVQSVSQLGHALCATRLQECSLV 185
SD + E CE + Q + L A L+E +LV
Sbjct: 256 YSDVDSE--SAERCERHPDGQYMCYLS----APVLKEMNLV 290
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 36.7 bits (81), Expect = 0.069
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 395 KVEKQRILHEQLSS-----IEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSAL 449
+VEK++ LHE LS+ IE + T +K+ ++SV +V +
Sbjct: 796 EVEKEKALHEDLSAQLEAKIEAERTFSVEAIKESFQSELQSVNSEVVELRGMVTALEHEV 855
Query: 450 VDE--YESEFRPERPALEQYKRALHRHVEAGLGSRLKKRLSSDIGNEMDVVQKEMA 503
V E + +E + + ALE KR L +E+ + ++L+ + + +D KE A
Sbjct: 856 VKEKTFSAELQMQLEALEAIKRVLESEIES--AHQDNRKLNDKVSSAVDFTAKEEA 909
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 34.7 bits (76), Expect = 0.28
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 382 DRVYNIATEQKAAKVE---KQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLT 438
++V + E K E K+ ++ EE++ ++ ++ K +E++ +
Sbjct: 521 NKVEQLEAEAKTTSEEWRSKELSFVSSITKSEEEIMSMRTRL-GKALETARDMENR-NAQ 578
Query: 439 LSQEIRRLSALVDEYESEFRPERPALEQYKR--ALHRHVEAGLGSRLKKRLSSDIGNEMD 496
L +++R L AL+D+ ++ +R + + YK LH HV+ GS K L S IGN+
Sbjct: 579 LEEKVRELEALMDK-DNNYRGGKDT-KAYKENDGLHLHVKESSGSEKIKDLYSLIGNDEG 636
Query: 497 VVQKE 501
+K+
Sbjct: 637 NTEKD 641
>05_01_0363 -
2846133-2846441,2846820-2846885,2847184-2847276,
2847487-2847600,2847762-2847849,2848116-2848199,
2848312-2848411,2848886-2848949,2849339-2849419,
2849944-2850000,2850188-2850387,2850668-2850971,
2851518-2851707,2851922-2852032,2852111-2852192,
2852443-2853046
Length = 848
Score = 33.5 bits (73), Expect = 0.65
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 55 EIDDYVKDAVTFMHAVSGENGIATPQDMG--NVESYVSKVEAIREV 98
++ D+ +DAV FM + +NG AT +DMG N+ Y+S + EV
Sbjct: 636 QMHDFKEDAVMFMSVLQAQNGQAT-EDMGCSNIPRYISGRQRFGEV 680
>09_04_0505 +
18183203-18183294,18183388-18183436,18183719-18184003,
18184914-18185135,18185272-18185421
Length = 265
Score = 33.1 bits (72), Expect = 0.85
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 391 QKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALV 450
+K +V++ + E+L++++EQL+ + +++ +K + + S EH +S I +A V
Sbjct: 64 KKRPQVDQAQKQREELAALQEQLSGLQKKLLEK-DEALRSAEHLIS-----RISAANAAV 117
Query: 451 DEYESEFRPERPALEQYKRALH 472
DE + + +E LH
Sbjct: 118 DELRGQLTEKESQIESTGSELH 139
>02_05_0405 +
28708077-28708391,28708478-28708573,28709030-28709450,
28710051-28710141,28710483-28710819,28710905-28711053,
28711782-28712295
Length = 640
Score = 33.1 bits (72), Expect = 0.85
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 326 PVSSPILAEGHQVRYFEFVDFERKFE-ECISQSAVRTKFAQHSRRGKNI------AGDVM 378
P +P E +VR F+ E + + A K ++S GK + DV
Sbjct: 58 PAPAPAAEEKRKVRNDHPRTSAAGFDPEALERGAAMLKQIENSPHGKKVFEILKQQEDVR 117
Query: 379 AA--LDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQM---KDKINRMVESVEH 433
A L + E A ++EK R+ +++ +E+Q + QM +D++ R +H
Sbjct: 118 RAENLTKKVEFQKELAAIELEKTRVDYDERKKLEQQRAQVKSQMSRYEDELARKRMQADH 177
Query: 434 KVSLTLSQEIRRL---SALVDE-----YESEFRPERPALEQYKRALHRHVE-----AGLG 480
+ +QE+ ++ SA+ E E + + ER ++ K + + +E A
Sbjct: 178 EAQRVRNQELVKMQEESAIRQEQMRRAIEEQIQEERRKTDRAKAIVEKEIEQEKILAEAN 237
Query: 481 SRLK-KRLSSDIGNEMDVVQKEMAER 505
+R+K K+ + D+ + +++ AE+
Sbjct: 238 ARIKLKKQTEDVERRL-LIEGAKAEK 262
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 32.7 bits (71), Expect = 1.1
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 261 ILNNRWDASASEPEY-----MEQVRTQHANRCVDFLSRELRVCSPKEAEERIFFISAKEA 315
++ RW A+E E +EQ A + + RE+ + A + ++ E
Sbjct: 175 LMAKRWAEEATEIEKFRADELEQAGIDEAQKREEEWQREIECVRGQHAADLETLVTTTEE 234
Query: 316 LLTRMRDREKPVSSPILAEGHQVRYFEFVDFERKFEECISQSAVRTKFAQHSRRGKNIAG 375
L R+ + A GH + + + E +S VR K S +
Sbjct: 235 LERFRRELAMANEAKKAALGHADDAMKIAEVNAEKVEILSSEVVRLKGLLDSTAESEESK 294
Query: 376 DVMAALDRVYNIATEQKA--AKVEKQRILHEQLSSIEEQLTTITRQMKD------KINRM 427
+ + V N+ +E K+E+ RI+ E+L+ E+ + + ++ D + ++
Sbjct: 295 N-RETEELVKNLESEVSVLKGKLEEARIIEERLAETEKLIEELKSEVADAKKAESEARQL 353
Query: 428 VESVEHKVSLTLSQEIRRLSALVDEYESE 456
E +HK L L E+ ++ L D+++ E
Sbjct: 354 FEEWKHKAGL-LEMELEAVT-LSDKFKGE 380
>05_07_0052 +
27340499-27340597,27340708-27340801,27341206-27341415,
27341727-27342439
Length = 371
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 403 HEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLT-LSQEIRRLSALVDEYESEFRPER 461
+E+ EQL + RQ D+IN + SV L+ + ++RL + E R
Sbjct: 272 NEEKVETMEQLLSCCRQAADQINDLGASVYPPQDLSEMKSSVKRLYGGANAMRREIRSLG 331
Query: 462 PALEQYKRALHRHVEAGLGSRLKKRLSSDIGNEMD 496
+ E AL R E LG+ L+ ++ D+ NEM+
Sbjct: 332 GSPEGAFVALER-FEKSLGA-LEVEIADDVANEME 364
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 32.3 bits (70), Expect = 1.5
Identities = 29/150 (19%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 355 SQSAVRTKFAQHSRRGKNIAGDVMAALDRVYNIA--TEQKAAKVEKQRILHEQLSSIEEQ 412
+ + + +F + R+ D+ ++ + TE+ +K+++ E+ SS+ Q
Sbjct: 381 NMKSCKDQFKEFERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKEVEESSSLIPQ 440
Query: 413 LTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVDEYESEFRPERPALEQYKRALH 472
L ++++K N E V ++ +E RL + + + SE P + ++K +L
Sbjct: 441 LEEEIPKLQEKFNE-EEKVLEQIKENSREETERLRSKLTQVRSELEPWENQIIEHKGSLD 499
Query: 473 RHVEAGLGSRLKKRLSSDIGNEMDVVQKEM 502
A +L K E+ Q +M
Sbjct: 500 ---VASAEKKLMKEKHDGARAELTAAQNQM 526
>08_02_1530 + 27670400-27671008
Length = 202
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 700 ELSTMFARLCRLIDEATTEMDAELSGVRDAIKMLDDASTSAK 741
E S + LC + E+ +E+ A + ++ AIK DDA+ AK
Sbjct: 42 ERSLVLLDLCNAMQESISELKASIQDMQLAIKRADDATVQAK 83
>04_01_0305 - 4141692-4142912
Length = 406
Score = 31.9 bits (69), Expect = 2.0
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 694 SHQVQQELSTMFARLCRLIDEATTEMDAELSGVRDAIKMLDDASTSAKKLRNKANYLSHE 753
++++ QE S + +R+ L++E TE+ E S + ++ L + +T + +A Y+S
Sbjct: 52 NNRLSQEKSNLESRVRWLVNE-NTELSNEKSYLESRVRRLVNENTELSNEKRRAAYVSST 110
Query: 754 LELFEEAFLKHNN 766
LE + L+H N
Sbjct: 111 LE-YRVRELEHQN 122
>09_06_0347 +
22445962-22446154,22446495-22446616,22446764-22446885,
22447405-22447594,22447874-22448014,22448257-22448724,
22448842-22449609,22450185-22450373
Length = 730
Score = 31.5 bits (68), Expect = 2.6
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 381 LDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLS 440
L+RV A E+K + + ++ L E L ++ ++K K +E K++ T+
Sbjct: 229 LERVRQEAYEEKCRREKAEQELFEALQKVQVSENLYFGELKQK-----NEIEVKLATTM- 282
Query: 441 QEIRRLSALVDEYESEFRPE-RPALEQYKRALH 472
+E+ RL+ DE ++F+ + L KR+ H
Sbjct: 283 EEVDRLARTADELAAKFQEQCEKILVLEKRSAH 315
>07_03_0603 - 19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 422 DKINRMVESVE-HKVSLTLSQEIRRLSALVDEYESE 456
D + R+ ES E HK++ L + IRRL LV E E +
Sbjct: 981 DILKRLCESEEGHKIARALKRHIRRLGCLVQELEKK 1016
>06_01_0859 -
6506029-6506133,6506255-6506319,6506461-6506539,
6506764-6506893,6507231-6507396,6507515-6507569,
6507693-6507739,6508416-6508614
Length = 281
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 301 KEAEERIFFISAKEALLTRMRDREKPVSSPILAEGHQVRYFEFVDFERKFEECISQSAVR 360
+++EE +F+++ + L M K + ILAE V + F D ++ E+ + +V
Sbjct: 83 RKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAE---VLGYSFFDSDKLVEQAVGMPSVA 139
Query: 361 TKFAQHS 367
F +HS
Sbjct: 140 QIFKEHS 146
>03_04_0098 - 17275045-17275665
Length = 206
Score = 31.1 bits (67), Expect = 3.4
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 706 ARLCRLIDEATTEMDAELSGVRDAIKMLDDAS 737
++L +++ A E+DA L +R+++K++DDA+
Sbjct: 168 SKLEQIVSTAIEEVDAALDAIRESLKIIDDAA 199
>08_02_1529 + 27668348-27669079
Length = 243
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 700 ELSTMFARLCRLIDEATTEMDAELSGVRDAIKMLDDASTSAK 741
E S + LC + E+ E+ A + ++ AIK DDA+ AK
Sbjct: 83 ERSLILLDLCNAMQESFCELKASIQDMQLAIKRADDAAVQAK 124
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 30.7 bits (66), Expect = 4.5
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 388 ATEQKAAKVEKQRILHEQLSSIEEQL-------TTITRQMKDKINRMVESVEHKVSLTLS 440
A E+K + +++ +L+EQL +I+++L T ++ + +++I E V +
Sbjct: 325 AIEEKISGDQRRYLLNEQLKAIKKELGLETDDKTALSAKFRERIEAKKEKCPAHVLQVIE 384
Query: 441 QEIRRLSALVDEYESEFRPERPALE 465
+E+ +L L++ SEF R L+
Sbjct: 385 EELTKLQ-LLEASSSEFNVTRNYLD 408
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 30.7 bits (66), Expect = 4.5
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 372 NIAGDVMAALDRVYNIATEQKAAKVEKQRI---LHEQ----LSSIEEQLTTITRQMK--- 421
N+ ++ A DRV + TE++AAK + + L E+ S E++ I MK
Sbjct: 223 NLQMELQQARDRVSELETERRAAKKKLDHLFKKLAEEKAAWRSREHEKVRAILEDMKADL 282
Query: 422 ---DKINRMVESVEHKVSLTLSQEIRRLSALVDEYESEFRPERPALEQYKRALHRHVEAG 478
K R +E + K+ L + L+ EY++E R R E+ L R VE
Sbjct: 283 DHEKKNRRRLEMINLKLVNELKEAKMSAKQLLQEYDNE-RKARELTEEVCNELAREVEED 341
Query: 479 LGS-RLKKRLSSDIGNEMDVVQK--EMAE 504
K S + E+D +K +MAE
Sbjct: 342 KAEIEALKHDSLKLREEVDEERKMLQMAE 370
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 30.7 bits (66), Expect = 4.5
Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 390 EQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLT--LSQEIRRLS 447
++ A+ EK+++L E +S+E K+KIN + S++ S L QE++ LS
Sbjct: 514 QEAASSAEKEKLLEEATNSVE--------AYKEKINELQASLDSTTSKNQLLEQEVKDLS 565
Query: 448 ALVDEYESEFRPERPALEQYKRALHRHVEAGLGSRLKKRLSSDIGNEMDVVQKEMAE 504
E++ + + + LH + + + + D+ NE++ ++ E
Sbjct: 566 DKFTEHQEQAHSVHERSLELESLLH---TSKSDAEVAHTRTQDLENELNTANEKFKE 619
>01_05_0777 +
25110356-25110662,25112569-25112789,25112880-25113127,
25113274-25113664,25113751-25114155,25115260-25115366,
25115833-25116170,25116206-25116486,25116645-25116889,
25116998-25117382,25117459-25117884
Length = 1117
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 36 DSPLQIFVRAKKKINDIFVEIDDYVKDAVTFMHAVSGENGIATPQDMGNVESY-VSKVEA 94
D+PL + + A+ + + + D V A+ H E+G + G V ++K E
Sbjct: 64 DAPLNVQLSAEARARTMPLGCHDVVPRAMPLFHQAMKEHGKVSITWFGPVPRVTITKPEL 123
Query: 95 IREVL--KRDHMKVAFFGR 111
+REVL K H + FGR
Sbjct: 124 VREVLSNKFGHFEKLKFGR 142
>12_02_1133 -
26368323-26369457,26369556-26369635,26370145-26370201,
26370508-26370601,26371006-26371092,26371179-26371268,
26371396-26371649
Length = 598
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 86 ESYVSKVEAIREVLKRDHMKVAFFGRTSNGKSTVINAMLHDKILPSGIGHT 136
+S + +++ V K H+ V F G + GKS+ INA++ +K +G+ HT
Sbjct: 298 DSRATSSDSVSSVAK--HVVVGFVGYPNVGKSSTINALVGEK--KTGVTHT 344
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 545 NEDLSFRFS---YGITALIQRFQGKNTNRIALNNPPQYT 580
NEDL YGI A I R G T R+ NNP +YT
Sbjct: 346 NEDLGLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYT 384
>08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036
Length = 420
Score = 30.3 bits (65), Expect = 6.0
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 315 ALLTRMRDREKPVSSPILAEGHQVRYFEFVDFERKFEECISQSAVRTKFAQHSRRGKNIA 374
A+L R RDR+ +S+ IL + + + E+ F + + + K S R +
Sbjct: 38 AVLLRERDRQL-ISTRILLQKNGLMK------EKAFNKEMKRKLEELKATTSSLRTQKT- 89
Query: 375 GDVMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHK 434
D+ + + AT K + E + +L E+ S + + T+T DK N + +E +
Sbjct: 90 -DLKTKIKGLEATATTLKNREKELEAVLAEKNSRVSQMEATLT----DK-NSHIRQMEER 143
Query: 435 VSLTLSQEIRRLSALVDEYESEFRPERPALEQYKRALHRHV 475
+ T ++ L L+ + E+E + + YK + V
Sbjct: 144 AAGTNPDQMAALMELLQQKEAELEEIKVRFQDYKTTERKSV 184
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 30.3 bits (65), Expect = 6.0
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 276 MEQVRTQHANRCVDFLSRELRVCSPKEAEERIFFISAKEALLTRM----RDR--EKPVSS 329
+E+V + +E R S + A ER I A+ A + R R+R EK +
Sbjct: 1187 LERVTAARQRASAEAREKEERA-STEAAAERAARIKAERAAVERATAEARERAIEKAKAE 1245
Query: 330 PILAEGHQVRYFEFVDFERKFEECISQSAVRTKFAQHSRRGKNIAGDVMAALDRVYNIAT 389
AE + R + F+E S + + Q ++ + ++ ++M D Y+
Sbjct: 1246 KAAAEARERRE----RYRSSFKESFKSSNLDNR--QDTQFQRAVSSNLMRNPDS-YSKGL 1298
Query: 390 EQKAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLS 447
E ++A K R+ Q ++ + M+D + + ++ +H++S L EI+R S
Sbjct: 1299 EVESALRHKARLERHQRTAERVTKALAEKNMRDLLAQREQAEKHRLSEYLDPEIKRWS 1356
>07_01_0346 -
2501825-2501908,2502143-2502244,2502623-2502646,
2502693-2502819,2503122-2505109,2505804-2505821
Length = 780
Score = 29.9 bits (64), Expect = 7.9
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 391 QKAAKVEKQRILHEQ-LSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSAL 449
Q+A + K+ + ++Q L + QL + K+++MV+ + +KVS TL ++++
Sbjct: 682 QQALVLTKKGLWYKQMLDTRRSQLRKAEAEESIKVSKMVDVLGNKVS-TLLSLVQKIYVT 740
Query: 450 VDEYESEFRPERPALEQYKRALHRHVEAGLGSRLKKRL 487
++ Y F+ L+ + + + AGL S+ K+ L
Sbjct: 741 LEHYSPVFQQYPGLLDAFLKTC--KLVAGLRSKQKEDL 776
>04_04_1340 + 32766773-32767582
Length = 269
Score = 29.9 bits (64), Expect = 7.9
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 392 KAAKVEKQRILHEQLSSIEEQLTTITRQMKDKINRMVESVEHKVSLTLSQEIRRLSALVD 451
+AA V+ +L E L+S++ T+ +K NR V ++E+ V L I + +D
Sbjct: 145 RAAHVKAIEVLVE-LASLQTSFLTLDEAIKTT-NRRVNALENVVKPRLENTISYIKGELD 202
Query: 452 EYESEFRPERPALEQY-KRALHRHVEA 477
E E E ++ Y KR + R + A
Sbjct: 203 ELEREDFFRLKKIQGYKKREIERQMAA 229
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 29.9 bits (64), Expect = 7.9
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 369 RGKNIAGDVMAALDRVYNIATEQKAAKVEKQRILHEQLSSIEEQLTTITR 418
R KN A ++ LD + ++KAA +E L E+L +EE L TI R
Sbjct: 354 RMKNEADELQKRLDSL----EDEKAALIEDSSKLSERLKQVEEVLQTIQR 399
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,158,139
Number of Sequences: 37544
Number of extensions: 735283
Number of successful extensions: 2148
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2135
Number of HSP's gapped (non-prelim): 41
length of query: 766
length of database: 14,793,348
effective HSP length: 88
effective length of query: 678
effective length of database: 11,489,476
effective search space: 7789864728
effective search space used: 7789864728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -