GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002819-TA|BGIBMGA002819-PA|IPR011046|WD40-like,
IPR001680|WD-40 repeat
         (895 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    25   8.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   8.8  

>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 730 IGDKDGCMSQWAINYRKLIAEAKYKVYQINPSTEIDFEEFVKLYINHRPAFG 781
           IGD +G  S+  + Y K +    + +  I PS   DF   +  +++  P+FG
Sbjct: 45  IGDLNGIKSR--LPYLKSLGMTAFWLSPIYPSPMADFGYDISNFMDIHPSFG 94


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 8/52 (15%)

Query: 829 ISILCGESFEDRAKMAENDFSFMP--EELTLDYL------ATYVIGVDDLEN 872
           +SILC E+   R+K+  N F  +   + L+L++       +T + G+ DL N
Sbjct: 94  LSILCNEAIMARSKLLPNSFVHLARLKALSLEFCKIAKFSSTVLAGLGDLRN 145


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.138    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 967,635
Number of Sequences: 2123
Number of extensions: 41654
Number of successful extensions: 54
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 3
length of query: 895
length of database: 516,269
effective HSP length: 70
effective length of query: 825
effective length of database: 367,659
effective search space: 303318675
effective search space used: 303318675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)