Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002818-TA|BGIBMGA002818-PA|IPR012999|Pyridine
nucleotide-disulphide oxidoreductase, class I, active site,
IPR013027|FAD-dependent pyridine nucleotide-disulphide oxidoreductase,
IPR004099|Pyridine nucleotide-disulphide oxidoreductase dimerisation
region, IPR001327|Pyridine nucleotide-disulphide oxidoreductase,
NAD-binding region, IPR006338|Thioredoxin and glutathione reductase
selenoprotein, IPR001100|Pyridine nucleotide-disulphide
oxidoreductase, class I, IPR000815|Mercuric reductase
(462 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 468 e-132
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 468 e-132
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 468 e-132
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 433 e-122
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 253 2e-67
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 250 2e-66
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 164 1e-40
U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical p... 59 7e-09
AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical... 31 1.3
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 31 1.7
AC024788-4|ABE73331.1| 305|Caenorhabditis elegans Hypothetical ... 31 1.7
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 30 3.0
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 30 3.0
U97005-5|AAB52284.1| 204|Caenorhabditis elegans Hypothetical pr... 30 4.0
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 30 4.0
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 30 4.0
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 29 5.2
U56965-10|AAB52670.1| 1041|Caenorhabditis elegans Nicotinamide n... 29 6.9
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 6.9
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 6.9
AC006655-6|AAF39878.2| 383|Caenorhabditis elegans Hypothetical ... 29 9.1
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 468 bits (1153), Expect = e-132
Identities = 233/457 (50%), Positives = 306/457 (66%), Gaps = 15/457 (3%)
Query: 18 YDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKKLM 77
+ YDL VIGGGSGGLA AKEA LG KV LD+V PSPQGT WGLGGTCVNVGCIPKKLM
Sbjct: 171 HTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGCIPKKLM 230
Query: 78 HQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIDYV 137
HQA+LLG SIH+A YGW++P ++ W L ++VQ+HI S+NW RV LREK + Y+
Sbjct: 231 HQASLLGHSIHDAKKYGWKLPE-GKVEHQWNHLRDSVQDHIASLNWGYRVQLREKTVTYI 289
Query: 138 NGLGEFKDAHTLIATLKNGSKKEITAKNIVIAVGGRPHYPDIPGAVEYCISSDDIFSLGH 197
N GEF + AT K +++TA +I+ G RP YP+IPG EY I+SDD+F L +
Sbjct: 290 NSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLRPKYPEIPGVKEYTITSDDLFQLPY 349
Query: 198 PPGKTLVVGAGYIGLECAGFLNSLGYPATVLVRSVPLRGFDQQMAQAVTSEMEQKGVVFH 257
PGKTL VGA Y+ LECAGFL+ G+ TV+VRS+ LRGFDQ MA+ + M G+ F
Sbjct: 350 SPGKTLCVGASYVSLECAGFLHGFGFDVTVMVRSILLRGFDQDMAERIRKHMIAYGMKF- 408
Query: 258 NKCVPLSVEKLE------TGQLKARW--QNTETQERGE--DVFDTVLMATGRYALTKTLN 307
VP +E+++ G+ + W +N ET E E + ++T+LMA GR A+T +
Sbjct: 409 EAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILMAIGREAVTDDVG 468
Query: 308 LEAAGVTCVSNSGKIIAETEQ-TNVSNIYAVGDVLEGKPELTPVAIHAGRLLARRMFAGA 366
L GV + S K++ EQ T + +YA+GDVLEG PELTPVAI AGR+L RR+F GA
Sbjct: 469 LTTIGVE-RAKSKKVLGRREQSTTIPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGA 527
Query: 367 TQPMDYDNVATTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQRNIR-N 425
+ +YD + TTVFTPLEYGC GLSEE A+ ++G D + +YH + P E+ I +R + +
Sbjct: 528 NELTEYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTISERMDKDH 587
Query: 426 CYLKAVALREAPQRILGLHFVGPVAGEVIQGFAAAVK 462
CYLK + LR ++++G H + P AGEV QGF A+K
Sbjct: 588 CYLKMICLRNEEEKVVGFHILTPNAGEVTQGFGIALK 624
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 468 bits (1153), Expect = e-132
Identities = 233/457 (50%), Positives = 306/457 (66%), Gaps = 15/457 (3%)
Query: 18 YDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKKLM 77
+ YDL VIGGGSGGLA AKEA LG KV LD+V PSPQGT WGLGGTCVNVGCIPKKLM
Sbjct: 29 HTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGCIPKKLM 88
Query: 78 HQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIDYV 137
HQA+LLG SIH+A YGW++P ++ W L ++VQ+HI S+NW RV LREK + Y+
Sbjct: 89 HQASLLGHSIHDAKKYGWKLPE-GKVEHQWNHLRDSVQDHIASLNWGYRVQLREKTVTYI 147
Query: 138 NGLGEFKDAHTLIATLKNGSKKEITAKNIVIAVGGRPHYPDIPGAVEYCISSDDIFSLGH 197
N GEF + AT K +++TA +I+ G RP YP+IPG EY I+SDD+F L +
Sbjct: 148 NSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLRPKYPEIPGVKEYTITSDDLFQLPY 207
Query: 198 PPGKTLVVGAGYIGLECAGFLNSLGYPATVLVRSVPLRGFDQQMAQAVTSEMEQKGVVFH 257
PGKTL VGA Y+ LECAGFL+ G+ TV+VRS+ LRGFDQ MA+ + M G+ F
Sbjct: 208 SPGKTLCVGASYVSLECAGFLHGFGFDVTVMVRSILLRGFDQDMAERIRKHMIAYGMKF- 266
Query: 258 NKCVPLSVEKLE------TGQLKARW--QNTETQERGE--DVFDTVLMATGRYALTKTLN 307
VP +E+++ G+ + W +N ET E E + ++T+LMA GR A+T +
Sbjct: 267 EAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILMAIGREAVTDDVG 326
Query: 308 LEAAGVTCVSNSGKIIAETEQ-TNVSNIYAVGDVLEGKPELTPVAIHAGRLLARRMFAGA 366
L GV + S K++ EQ T + +YA+GDVLEG PELTPVAI AGR+L RR+F GA
Sbjct: 327 LTTIGVE-RAKSKKVLGRREQSTTIPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGA 385
Query: 367 TQPMDYDNVATTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQRNIR-N 425
+ +YD + TTVFTPLEYGC GLSEE A+ ++G D + +YH + P E+ I +R + +
Sbjct: 386 NELTEYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTISERMDKDH 445
Query: 426 CYLKAVALREAPQRILGLHFVGPVAGEVIQGFAAAVK 462
CYLK + LR ++++G H + P AGEV QGF A+K
Sbjct: 446 CYLKMICLRNEEEKVVGFHILTPNAGEVTQGFGIALK 482
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 468 bits (1153), Expect = e-132
Identities = 233/457 (50%), Positives = 306/457 (66%), Gaps = 15/457 (3%)
Query: 18 YDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKKLM 77
+ YDL VIGGGSGGLA AKEA LG KV LD+V PSPQGT WGLGGTCVNVGCIPKKLM
Sbjct: 171 HTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGCIPKKLM 230
Query: 78 HQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIDYV 137
HQA+LLG SIH+A YGW++P ++ W L ++VQ+HI S+NW RV LREK + Y+
Sbjct: 231 HQASLLGHSIHDAKKYGWKLPE-GKVEHQWNHLRDSVQDHIASLNWGYRVQLREKTVTYI 289
Query: 138 NGLGEFKDAHTLIATLKNGSKKEITAKNIVIAVGGRPHYPDIPGAVEYCISSDDIFSLGH 197
N GEF + AT K +++TA +I+ G RP YP+IPG EY I+SDD+F L +
Sbjct: 290 NSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLRPKYPEIPGVKEYTITSDDLFQLPY 349
Query: 198 PPGKTLVVGAGYIGLECAGFLNSLGYPATVLVRSVPLRGFDQQMAQAVTSEMEQKGVVFH 257
PGKTL VGA Y+ LECAGFL+ G+ TV+VRS+ LRGFDQ MA+ + M G+ F
Sbjct: 350 SPGKTLCVGASYVSLECAGFLHGFGFDVTVMVRSILLRGFDQDMAERIRKHMIAYGMKF- 408
Query: 258 NKCVPLSVEKLE------TGQLKARW--QNTETQERGE--DVFDTVLMATGRYALTKTLN 307
VP +E+++ G+ + W +N ET E E + ++T+LMA GR A+T +
Sbjct: 409 EAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILMAIGREAVTDDVG 468
Query: 308 LEAAGVTCVSNSGKIIAETEQ-TNVSNIYAVGDVLEGKPELTPVAIHAGRLLARRMFAGA 366
L GV + S K++ EQ T + +YA+GDVLEG PELTPVAI AGR+L RR+F GA
Sbjct: 469 LTTIGVE-RAKSKKVLGRREQSTTIPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGA 527
Query: 367 TQPMDYDNVATTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQRNIR-N 425
+ +YD + TTVFTPLEYGC GLSEE A+ ++G D + +YH + P E+ I +R + +
Sbjct: 528 NELTEYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTISERMDKDH 587
Query: 426 CYLKAVALREAPQRILGLHFVGPVAGEVIQGFAAAVK 462
CYLK + LR ++++G H + P AGEV QGF A+K
Sbjct: 588 CYLKMICLRNEEEKVVGFHILTPNAGEVTQGFGIALK 624
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 433 bits (1068), Expect = e-122
Identities = 214/447 (47%), Positives = 301/447 (67%), Gaps = 10/447 (2%)
Query: 20 YDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKKLMHQ 79
+DL VIG GSGGL+C+K A +LGA V ++D V P+P G WG+GGTC NVGCIPKKLMHQ
Sbjct: 21 FDLIVIGAGSGGLSCSKRAADLGANVALIDAVEPTPHGHSWGIGGTCANVGCIPKKLMHQ 80
Query: 80 AALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKKIDYVNG 139
AA++G+ + A YGW + IK +W L++ V + +K+ NW+ RV L +KKI+Y N
Sbjct: 81 AAIVGKELKHADKYGWNGIDQEKIKHDWNVLSKNVNDRVKANNWIYRVQLNQKKINYFNA 140
Query: 140 LGEF--KDAHTLIATLKNGSKKEITAKNIVIAVGGRPHYPDIPGAVEYCISSDDIFSLGH 197
EF KD + T KN +K ++A N+VI+ G RP YP+IPGA E I+SDD+F+L
Sbjct: 141 YAEFVDKDKIVITGTDKNKTKNFLSAPNVVISTGLRPKYPNIPGA-ELGITSDDLFTLAS 199
Query: 198 PPGKTLVVGAGYIGLECAGFLNSLGYPATVLVRSVPLRGFDQQMAQAVTSEMEQKGVVFH 257
PGKTL+VG GY+ LECAGFL++ VLVRS+PL+GFD+ V ++ GV
Sbjct: 200 VPGKTLIVGGGYVALECAGFLSAFNQNVEVLVRSIPLKGFDRDCVHFVMEHLKTTGVKVK 259
Query: 258 NKCVPLSVEKLETGQLKARWQNTETQERGEDVFDTVLMATGRYALTKTLNLEAAGVTCVS 317
+ VE++E + ++ + T T G + +DTV+ A GR K+LNL+ AGV
Sbjct: 260 EH---VEVERVEA--VGSKKKVTFTGNGGVEEYDTVIWAAGRVPNLKSLNLDNAGVRTDK 314
Query: 318 NSGKIIA-ETEQTNVSNIYAVGDVLEGKPELTPVAIHAGRLLARRMFAGATQPMDYDNVA 376
SGKI+A E ++ + + +YAVGD+++ + ELTP+AI +G+LLA R+F+ + Q + +D VA
Sbjct: 315 RSGKILADEFDRASCNGVYAVGDIVQDRQELTPLAIQSGKLLADRLFSNSKQIVRFDGVA 374
Query: 377 TTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQ-RNIRNCYLKAVALRE 435
TTVFTPLE VGL+EE A+ +HG D +EV+H+ + P E+ +PQ ++ CY+KAV R+
Sbjct: 375 TTVFTPLELSTVGLTEEEAIQKHGEDSIEVFHSHFTPFEYVVPQNKDSGFCYVKAVCTRD 434
Query: 436 APQRILGLHFVGPVAGEVIQGFAAAVK 462
Q+ILGLHFVGP A EVIQG+A A +
Sbjct: 435 ESQKILGLHFVGPNAAEVIQGYAVAFR 461
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 253 bits (620), Expect = 2e-67
Identities = 167/461 (36%), Positives = 258/461 (55%), Gaps = 31/461 (6%)
Query: 5 ILDTKFKNILAGTYDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGG 64
IL T ++I++G ++D VIGGGSGG+A A+ A G V +++ LGG
Sbjct: 7 ILSTS-RSIMSGVKEFDYLVIGGGSGGIASARRAREFGVSVGLIE---------SGRLGG 56
Query: 65 TCVNVGCIPKKLMHQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWV 124
TCVNVGC+PKK+M+ +L E I + YG++V +L+ K +W + ++ +IK +N +
Sbjct: 57 TCVNVGCVPKKVMYNCSLHAEFIRDHADYGFDV-TLN--KFDWKVIKKSRDEYIKRLNGL 113
Query: 125 TRVDLREKKIDYVNGLGEFKDAHTLIATLKNGSKKEITAKNIVIAVGGRPHYPDIPGAVE 184
L+ ++Y+ G F + T+ NG+K KN +IAVGG+P P+I GA E
Sbjct: 114 YESGLKGSSVEYIRGRATFAEDGTVEV---NGAK--YRGKNTLIAVGGKPTIPNIKGA-E 167
Query: 185 YCISSDDIFSLGHPPGKTLVVGAGYIGLECAGFLNSLGYPATVLVR-SVPLRGFDQQMAQ 243
+ I SD F L P +T+VVGAGYI +E AG L +LG +L+R LR FD+ ++
Sbjct: 168 HGIDSDGFFDLEDLPSRTVVVGAGYIAVEIAGVLANLGSDTHLLIRYDKVLRTFDKMLSD 227
Query: 244 AVTSEMEQK--GVVFHNKCVPLSVEKLETGQLKARWQNTETQERGEDVFDTVLMATGRYA 301
+T++M+++ + H V K + G L + T E+ T++ A GR
Sbjct: 228 ELTADMDEETNPLHLHKNTQVTEVIKGDDGLLTIK-TTTGVIEK----VQTLIWAIGRDP 282
Query: 302 LTKTLNLEAAGVTCVSNSGKIIAETEQTNVSNIYAVGDVLEGKPELTPVAIHAGRLLARR 361
LTK LNLE GV + I+ E + T+ I +VGD GK LTPVAI AGR L+ R
Sbjct: 283 LTKELNLERVGVKTDKSGHIIVDEYQNTSAPGILSVGDD-TGKFLLTPVAIAAGRRLSHR 341
Query: 362 MFAGAT-QPMDYDNVATTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQ 420
+F G T + Y+N+AT VF+ G VGL+E A+ ++G D+V +Y + + P F + +
Sbjct: 342 LFNGETDNKLTYENIATVVFSHPLIGTVGLTEAEAVEKYGKDEVTLYKSRFNPMLFAVTK 401
Query: 421 RNIRNCYLKAVALREAPQRILGLHFVGPVAGEVIQGFAAAV 461
+K V + + ++++G+H G + E++QGFA AV
Sbjct: 402 HK-EKAAMKLVCVGK-DEKVVGVHVFGVGSDEMLQGFAVAV 440
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 250 bits (611), Expect = 2e-66
Identities = 163/452 (36%), Positives = 252/452 (55%), Gaps = 30/452 (6%)
Query: 14 LAGTYDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIP 73
++G ++D VIGGGSGG+A A+ A G V +++ LGGTCVNVGC+P
Sbjct: 1 MSGVKEFDYLVIGGGSGGIASARRAREFGVSVGLIE---------SGRLGGTCVNVGCVP 51
Query: 74 KKLMHQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVNWVTRVDLREKK 133
KK+M+ +L E I + YG++V +L+ K +W + ++ +IK +N + L+
Sbjct: 52 KKVMYNCSLHAEFIRDHADYGFDV-TLN--KFDWKVIKKSRDEYIKRLNGLYESGLKGSS 108
Query: 134 IDYVNGLGEFKDAHTLIATLKNGSKKEITAKNIVIAVGGRPHYPDIPGAVEYCISSDDIF 193
++Y+ G F + T+ NG+K KN +IAVGG+P P+I GA E+ I SD F
Sbjct: 109 VEYIRGRATFAEDGTVEV---NGAK--YRGKNTLIAVGGKPTIPNIKGA-EHGIDSDGFF 162
Query: 194 SLGHPPGKTLVVGAGYIGLECAGFLNSLGYPATVLVR-SVPLRGFDQQMAQAVTSEMEQK 252
L P +T+VVGAGYI +E AG L +LG +L+R LR FD+ ++ +T++M+++
Sbjct: 163 DLEDLPSRTVVVGAGYIAVEIAGVLANLGSDTHLLIRYDKVLRTFDKMLSDELTADMDEE 222
Query: 253 --GVVFHNKCVPLSVEKLETGQLKARWQNTETQERGEDVFDTVLMATGRYALTKTLNLEA 310
+ H V K + G L + T E+ T++ A GR LTK LNLE
Sbjct: 223 TNPLHLHKNTQVTEVIKGDDGLLTIK-TTTGVIEK----VQTLIWAIGRDPLTKELNLER 277
Query: 311 AGVTCVSNSGKIIAETEQTNVSNIYAVGDVLEGKPELTPVAIHAGRLLARRMFAGAT-QP 369
GV + I+ E + T+ I +VGD GK LTPVAI AGR L+ R+F G T
Sbjct: 278 VGVKTDKSGHIIVDEYQNTSAPGILSVGDD-TGKFLLTPVAIAAGRRLSHRLFNGETDNK 336
Query: 370 MDYDNVATTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQRNIRNCYLK 429
+ Y+N+AT VF+ G VGL+E A+ ++G D+V +Y + + P F + + +K
Sbjct: 337 LTYENIATVVFSHPLIGTVGLTEAEAVEKYGKDEVTLYKSRFNPMLFAVTKHK-EKAAMK 395
Query: 430 AVALREAPQRILGLHFVGPVAGEVIQGFAAAV 461
V + + ++++G+H G + E++QGFA AV
Sbjct: 396 LVCVGK-DEKVVGVHVFGVGSDEMLQGFAVAV 426
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 164 bits (399), Expect = 1e-40
Identities = 137/461 (29%), Positives = 218/461 (47%), Gaps = 29/461 (6%)
Query: 3 MPILDTKFKNILAGTY----DYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGT 58
+P +F +LA Y D DL VIGGG GG A +A LG K ++ T
Sbjct: 9 LPFAKRQFFQVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVE-----KNAT 63
Query: 59 KWGLGGTCVNVGCIPKK-LMHQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNH 117
LGGTC+NVGCIP K L++ + L + H+ A G + + +N P + EA N
Sbjct: 64 ---LGGTCLNVGCIPSKALLNNSHYLHMAQHDFAARGIDCTA----SLNLPKMMEAKSNS 116
Query: 118 IKSVNWVTRVDLREKKIDYVNGLGEFKDAHTLIATLKNGSKKEITAKNIVIAVGGR-PHY 176
+K + + + K+ +V G +T+ A +GS + I A+NI+IA G +
Sbjct: 117 VKQLTGGIKQLFKANKVGHVEGFATIVGPNTVQAKKNDGSVETINARNILIASGSEVTPF 176
Query: 177 PDIPGAVEYCISSDDIFSLGHPPGKTLVVGAGYIGLECAGFLNSLGYPATVL--VRSVPL 234
P I + +SS SLG P K +V+GAG IGLE LG T + + V
Sbjct: 177 PGITIDEKQIVSSTGALSLGQVPKKMVVIGAGVIGLELGSVWQRLGAEVTAVEFLGHVGG 236
Query: 235 RGFDQQMAQAVTSEMEQKGVVFHNKCVPLSVEKLETGQLKARWQNTETQERGEDVFDTVL 294
G D ++++ + ++G F + + + + + ++ DT+L
Sbjct: 237 MGIDGEVSKNFQRSLTKQGFKFLLNTKVMGASQ-NGSTITVEVEGAKDGKKQTLECDTLL 295
Query: 295 MATGRYALTKTLNLEAAGVTCVSNSGKI-IAETEQTNVSNIYAVGDVLEGKPELTPVAIH 353
++ GR T+ L L + + N G++ + E QT V +I+A+GDV+EG P L A
Sbjct: 296 VSVGRRPYTEGLGLSNVQID-LDNRGRVPVNERFQTKVPSIFAIGDVIEG-PMLAHKAED 353
Query: 354 AGRLLARRMFAGATQPMDYDNVATTVFTPLEYGCVGLSEETALARHGADKVEVYHAFYKP 413
G +L AG +DY+ V + V+T E VG +EE A K+ + F
Sbjct: 354 EG-ILCVEGIAGGPVHIDYNCVPSVVYTHPEVAWVGKAEEQLKQEGVAYKIGKF-PFVAN 411
Query: 414 TEFFIPQRNIRNCYLKAVALREAPQRILGLHFVGPVAGEVI 454
+ N + ++K +A ++ R+LG+H +GP AGE+I
Sbjct: 412 SR--AKTNNDQEGFVKVLADKQT-DRMLGVHIIGPNAGEMI 449
>U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical
protein F20D6.11 protein.
Length = 549
Score = 58.8 bits (136), Expect = 7e-09
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 152 TLKNGSKKEITAKNIVIAVGGRPHYPDIPGA--VEYC----ISSDDIFSLGHPPGKTLVV 205
+L NG + + ++IA GG +PG+ C + +I S HP + V
Sbjct: 231 SLSNG--ETVVYSKLIIATGGNVRKLQVPGSDLKNICYLRKVEEANIISNLHPGKHVVCV 288
Query: 206 GAGYIGLECAGFLNSLGYPATVLVRSV-PLRGFDQQMAQAVTSEMEQKGVVFHNKCVPLS 264
G+ +IG+E A L TV+ + PL F + + + + E+KGV F ++
Sbjct: 289 GSSFIGMEVASALAEKAASVTVISNTPEPLPVFGSDIGKGIRLKFEEKGVKFELAANVVA 348
Query: 265 VEKLETGQLKARWQNTETQERGEDVFDTVLMATGRYALTKTLNLEAAGVTCVSNSGKI-I 323
+ + G++ + E G+++ D L+ G T LE +G+ + N G I +
Sbjct: 349 LRGNDQGEV-----SKVILENGKEL-DVDLLVCGIGVTPATKFLEGSGIK-LDNRGFIEV 401
Query: 324 AETEQTNVSNIYAVGDVL 341
E +TN+S I+A+GDV+
Sbjct: 402 DEKFRTNISYIFAMGDVV 419
>AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical
protein Y50E8A.6 protein.
Length = 609
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 20 YDLAVIGGGSGGLACAKEAVNLGAKVTVLDY 50
+D+ VIGGGS G A +A G K +++Y
Sbjct: 63 FDVLVIGGGSAGAGVALDAQTRGLKTAMVEY 93
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 20 YDLAVIGGGSGGLACAKEAVNLGAKVTVLD 49
YD +IGGG GL A G KV VL+
Sbjct: 15 YDAIIIGGGHNGLTAAAYLTKAGKKVCVLE 44
>AC024788-4|ABE73331.1| 305|Caenorhabditis elegans Hypothetical
protein Y46E12A.4 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 248 EMEQKGVVFH-NKCVPLSVEKLETGQLK---ARWQNTETQERGEDVFDTVLMATGRYALT 303
E KG+ H N + +++E + +LK RW++ + QE + LM +GR L
Sbjct: 37 EFAFKGLCEHLNYKIGVTMEPISYQKLKFTAGRWESLDIQEEMVQPNEVFLMKSGRELLQ 96
Query: 304 KTLNLEAAGVTCVSNSGKIIAETEQ-TNVSNIYAVGDVLEGKPELTPVAIH 353
+ L LE +T NS + +++Q V ++ VL E++PV H
Sbjct: 97 RGLKLEKLKLT---NSKDALQKSDQMIRVQSMRQYMPVL-NIYEISPVGAH 143
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 3.0
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 2 AMPILDTKFKNILAGTYDYDLAVIGGGSGGLACAKEAVNLGAKVTVL---DYVT-PSPQG 57
A+P N+ G ++D+ +IGGG+ G A +A G K ++ D+ + S +
Sbjct: 58 ALPTRKDILTNLSKGE-EFDVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGTSSRS 116
Query: 58 TKWGLGGTCVNVGCIPKKLMHQAALLGESIHE 89
TK GG I K + Q ++ E++ E
Sbjct: 117 TKLIHGGVRYLQAAIMKLDLEQYRMVKEALFE 148
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 3.0
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 2 AMPILDTKFKNILAGTYDYDLAVIGGGSGGLACAKEAVNLGAKVTVL---DYVT-PSPQG 57
A+P N+ G ++D+ +IGGG+ G A +A G K ++ D+ + S +
Sbjct: 58 ALPTRKDILTNLSKGE-EFDVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGTSSRS 116
Query: 58 TKWGLGGTCVNVGCIPKKLMHQAALLGESIHE 89
TK GG I K + Q ++ E++ E
Sbjct: 117 TKLIHGGVRYLQAAIMKLDLEQYRMVKEALFE 148
>U97005-5|AAB52284.1| 204|Caenorhabditis elegans Hypothetical
protein F19F10.6 protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 63 GGTCVNVGCIPKKLMHQAALLGESIHEAVAYGWEVPSLDAIKINWPALTEAVQNHIKSVN 122
GG + +K+ Q+ + +H VA+ ++VP L+ K W A + ++ N
Sbjct: 130 GGQLSGPASLDEKVFIQSKFIPRLLH-VVAFEFKVPYLNYFKFEWNAGEPRGEKCLEITN 188
Query: 123 WVTRVDLREKKIDYV 137
+ D R KI +
Sbjct: 189 FSNETDPRNGKISTI 203
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 20 YDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVG 70
YD V+G G GL A G K V+ + P+ T GG +G
Sbjct: 43 YDAVVVGAGGAGLRAAMGLAEEGLKTAVITKLFPTRSHTVAAQGGINAALG 93
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 381 TPLEYGCVGLSEETALARHGADKVEVYHAFYKPTEFFIPQRNIRNCYLKAVALRE---AP 437
TP + G EE LA G D +F + EF + I++ + +A R+ P
Sbjct: 791 TPPSHRAPGAGEEVTLAAIGTDYARGPTSFVEEMEFIDVKLAIQSNITRVLAHRQKKFPP 850
Query: 438 QRILGLHFVGPV 449
Q++ H +G +
Sbjct: 851 QKLAWFHIIGKI 862
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 20 YDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVG 70
YD V+G G GL A G K V+ + P+ T GG +G
Sbjct: 43 YDAVVVGAGGAGLRAAMGLAEGGLKTAVITKLFPTRSHTVAAQGGINAALG 93
>U56965-10|AAB52670.1| 1041|Caenorhabditis elegans Nicotinamide
nucleotide transhydrogenaseprotein 1 protein.
Length = 1041
Score = 29.1 bits (62), Expect = 6.9
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 11/59 (18%)
Query: 198 PPGKTLVVGAGYIGLECAGFLNSLGYPATVLVRSVPLRGFDQQMAQAVTSEMEQKGVVF 256
PP K LV+G G GL G S G A V RGFD + AV +E G F
Sbjct: 192 PPAKVLVIGGGVAGLSAIG--TSRGMGAVV-------RGFDTR--AAVKEHVESLGAQF 239
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 334 IYAVGDVLEGKP-ELTPVAIHAGRLLARRMFAGATQPMDYDNVATTVFTPLEYGC 387
+ VG+ GK ++T AI AG L RR G TQP ++ EYGC
Sbjct: 559 LVVVGETGSGKTTQMTQYAIEAG--LGRRGKIGCTQPRRVAAMSVAKRVAEEYGC 611
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 334 IYAVGDVLEGKP-ELTPVAIHAGRLLARRMFAGATQPMDYDNVATTVFTPLEYGC 387
+ VG+ GK ++T AI AG L RR G TQP ++ EYGC
Sbjct: 559 LVVVGETGSGKTTQMTQYAIEAG--LGRRGKIGCTQPRRVAAMSVAKRVAEEYGC 611
>AC006655-6|AAF39878.2| 383|Caenorhabditis elegans Hypothetical
protein H10D18.6 protein.
Length = 383
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 45 VTVLDYVTPSPQGTKWGLGGTCVNVGCIPKKLMHQAALLGESIHEAVAYGWEVPSLDAIK 104
+ LD+ PS Q T G+GG V++ IP K + + W +P +K
Sbjct: 143 IPFLDFPRPSIQKTI-GIGGIAVDIEAIPPKYESDDVTFANDVENVIFVKW-MPQTALLK 200
Query: 105 IN 106
N
Sbjct: 201 DN 202
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,215,085
Number of Sequences: 27539
Number of extensions: 483068
Number of successful extensions: 1193
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1137
Number of HSP's gapped (non-prelim): 26
length of query: 462
length of database: 12,573,161
effective HSP length: 84
effective length of query: 378
effective length of database: 10,259,885
effective search space: 3878236530
effective search space used: 3878236530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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