Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002817-TA|BGIBMGA002817-PA|IPR013032|EGF-like region,
IPR001965|Zinc finger, PHD-type, IPR007087|Zinc finger, C2H2-type,
IPR011011|Zinc finger, FYVE/PHD-type
(1640 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 64 7e-12
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 48 8e-07
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 36 0.002
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 29 0.24
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 27 0.96
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 2.9
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 26 2.9
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 25 3.9
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 3.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 5.1
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 64.5 bits (150), Expect = 7e-12
Identities = 66/282 (23%), Positives = 105/282 (37%), Gaps = 21/282 (7%)
Query: 743 EHMFECFQCYFKTAVHKDLYLHNRKMHQKT---ILLCIMCKSNFYSYSELLCHLCPGTYN 799
E ++C C K K+LY + + H K C +C F + L H T
Sbjct: 59 EKTYQCLLCQ-KAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGE 117
Query: 800 ADYEAKFRCCLCSIDSIPSQFRLMVHLRKIHHTCDVCLEFCHNQARLSNHVWKH--KLHH 857
Y+ ++ S+ S R +H ++ + CDVC + +L H+ H + H
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHR-RIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPH 176
Query: 858 LCYRCGIAYRNKPDITNHLFWKHGTESVLCKKC-----LQKKWPHVYHFCTPPAIFMCEE 912
C C + + H+ G + +CK C K+ T + C+
Sbjct: 177 KCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDI 236
Query: 913 CNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEKFVSKKLLNKHLEQHKNKMSVEDLTVP 972
C F LK+H+ H GE + C C E F SKK + H++ H + V
Sbjct: 237 CGKSFGYNHVLKLHQVAHYGEKVYKCTL--CHETFGSKKTMELHIKTHS-----DSSVVG 289
Query: 973 DKVTSPKAPEEPIP--IIDLVDDKPPEEAGSSNDKIKPENET 1012
SP PE I + DK + ND++ + T
Sbjct: 290 SPRDSPIEPEIEISQNSVSTGSDKENHKTEEPNDEVATYDNT 331
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 47.6 bits (108), Expect = 8e-07
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 908 FMCEECNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEKFVSKKLLNKHLEQH 960
F C EC+ +F+R LK H R H+GE P+ C C +FV L +HL H
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKPYHC--SHCDRQFVQVANLRRHLRVH 60
Score = 35.1 bits (77), Expect = 0.005
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 908 FMCEECNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEK 946
+ C C+ QF + +L+ H R H+GE P+ C E C K
Sbjct: 38 YHCSHCDRQFVQVANLRRHLRVHTGERPYAC--ELCAAK 74
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 36.3 bits (80), Expect = 0.002
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 923 LKVHKRFHSGEFPHPCVEEGCTEKFVSKKLLNKHLEQHKN 962
L+ H R H G P C E C+ V+K +LN HL+ H N
Sbjct: 4 LEYHLRNHFGSKPFKC--EKCSYSCVNKSMLNSHLKSHSN 41
Score = 27.9 bits (59), Expect = 0.72
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 900 HFCTPPAIFMCEECNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEKFVSKKLLNKHLEQ 959
HF + P F CE+C+ L H + HS + + C CT L HL +
Sbjct: 11 HFGSKP--FKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCA--NCTYATKYCHSLKLHLRK 66
Query: 960 HKN 962
+ +
Sbjct: 67 YSH 69
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 29.5 bits (63), Expect = 0.24
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 910 CEECNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEKF 947
C C FSR L+ H R H+GE P C + C F
Sbjct: 45 CHLCGKAFSRPWLLQGHIRTHTGEKPFSC--QHCNRAF 80
Score = 28.7 bits (61), Expect = 0.41
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 832 TCDVCLEFCHNQARLSNHVWKHKLHHLCYRCGIAYRNKPDITNHLFWKHGTESVLCKKC 890
+C C + + L H+ H L C+ CG A+ + H+ G + C+ C
Sbjct: 18 SCKYCEKVYVSLGALKMHIRTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHC 76
Score = 27.1 bits (57), Expect = 1.3
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 908 FMCEECNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEKFVSKKLLNKHLEQH 960
F C+ C + +LK+H R H+ PC C + F LL H+ H
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRTHT----LPCKCHLCGKAFSRPWLLQGHIRTH 65
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 27.5 bits (58), Expect = 0.96
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 785 SYSELLCHLCPGTYNADYEAKFRC 808
++ +LC CPG Y+ FRC
Sbjct: 400 AFVRILCACCPGRVRRRYQPAFRC 423
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 555 LTVDEDPGPVNPPVVAKRDSVTEAEPMELTPPL 587
L D + +PPV KRD E E E PPL
Sbjct: 610 LKTDTNQSCPSPPVTTKRDGTQETE--ERLPPL 640
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 857 HLCYRCGIAYRNKPDITNHLFWKHGTESVLCKKCLQ 892
++C C YR K +T H +H S + K+ L+
Sbjct: 36 YVCEFCNRRYRTKNSLTTHKSLQHRGSSGMLKRLLK 71
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 25.4 bits (53), Expect = 3.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 1453 SDEESPQTAALKPQL---PPKLEWRKEDLPSPVTHKAKKEVPSTII 1495
SDE+ AL ++ P + W + V K +KE+P++II
Sbjct: 133 SDEKISTLYALGAKIIRTPTEASWHSPEAHISVAQKLQKEIPNSII 178
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 904 PPAI-FMCEECNLQFSRAVSLKVHKRFHSGEFPHPCVEEGCTEKFVSKKLLNKH 956
PP + + C+ C S ++LK HK + + V C + F + LN H
Sbjct: 367 PPGVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNH 420
Score = 24.6 bits (51), Expect = 6.7
Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 225 PVPMLVSKNAVKQTNIKNAKHFNELPQNGPFSVTKD---IIRSGSGNRDSTDTKLDLPSV 281
P P+ + V+Q + NE P T ++ N D+T T +
Sbjct: 157 PTPVTPTPTTVQQLLRRAQIRRNERRTPDPHDETAKKPRVLSPPLNNNDATPTDFSMGVK 216
Query: 282 LHKSAERITTDGIHSDTSVSSDNSAA-----TSKDTSKTADSGLESSDNRLISS 330
+ + ++ +G+H + S DN T ++ A + +SSD+ +S
Sbjct: 217 NNHVSSKVEGNGVHEENSPLEDNIKCEPLELTGGNSGNAAGNNEDSSDSGAAAS 270
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 5.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 162 SKADKLSAHLTNKHNVKEFSYGTKEEFFNIYN 193
SK K+ + L+N +N ++ K ++NI N
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNYKPLYYNIIN 340
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.315 0.131 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,769
Number of Sequences: 429
Number of extensions: 19989
Number of successful extensions: 75
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 19
length of query: 1640
length of database: 140,377
effective HSP length: 67
effective length of query: 1573
effective length of database: 111,634
effective search space: 175600282
effective search space used: 175600282
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)
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