Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002816-TA|BGIBMGA002816-PA|IPR013838|Beta tubulin,
autoregulation binding site, IPR008954|Moesin
(296 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 38 0.002
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 36 0.005
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 35 0.012
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 32 0.11
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 31 0.15
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.26
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.35
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 30 0.46
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 30 0.46
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 1.1
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 29 1.1
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 29 1.1
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 28 1.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 1.4
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 1.4
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 28 1.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.4
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 2.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.4
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 27 3.2
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 3.2
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 27 3.2
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 27 3.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 3.2
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 27 4.3
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 27 4.3
SPBC1604.16c |||RNA-binding protein, G-patch type |Schizosacchar... 27 4.3
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 4.3
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 27 4.3
SPAC343.13 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces... 26 5.6
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 26 5.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 5.6
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 7.4
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 26 7.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 7.4
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 25 9.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 9.8
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 9.8
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 25 9.8
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 9.8
SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr ... 25 9.8
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 25 9.8
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 25 9.8
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 25 9.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 37.9 bits (84), Expect = 0.002
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 191 AAHQLLDDVGEGTLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYED 250
A QLL E L +RL KL + ES+ L ++ ARQ ++N ++
Sbjct: 913 AEKQLLHTENE-ELHIRLDKLTGKLKIEESK----SSDLGKKLTARQEEISNLKEENMSQ 967
Query: 251 ELLIHEINFQTREALNRVEELETENSHLTKRLDKLKNAKSALL 293
I + + E L++ +LE + HL ++ +++ ++ALL
Sbjct: 968 SQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALL 1010
Score = 27.1 bits (57), Expect = 3.2
Identities = 22/94 (23%), Positives = 37/94 (39%)
Query: 203 TLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTR 262
T D K+V+ + L+ E IQ + A ++ N +E E IH +
Sbjct: 1313 TTDAEFTKVVADLEKLQHEHDDWLIQRGDLEKALKDSEKNFLRKEAEMTENIHSLEEGKE 1372
Query: 263 EALNRVEELETENSHLTKRLDKLKNAKSALLKDL 296
E + EL + +KLKN L +++
Sbjct: 1373 ETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEI 1406
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 52 SADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQL 111
S+ +++D ++LK +E+ +K + ++K +LE L + +LGEE AQ+
Sbjct: 1062 SSQTNKSLEDKTNQLKYIEKNVQKLL-------DEKDQRNVELEELTSKYGKLGEENAQI 1114
Query: 112 QREHKEKCSTHERLKREH 129
+ E + ++ K++H
Sbjct: 1115 K---DELLALRKKSKKQH 1129
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/66 (19%), Positives = 36/66 (54%)
Query: 70 EEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLKREH 129
+EK K+++ + + + ++L + L + +EL + + ++ K+ S ++L+ E
Sbjct: 587 QEKLAKSVMQLKENEQNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLER 646
Query: 130 ASVERE 135
A+ E++
Sbjct: 647 ANFEQK 652
Score = 25.4 bits (53), Expect = 9.8
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 203 TLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTR 262
+LD +KL S Q LE+ + + QL + + Q +L + NF+ +
Sbjct: 606 SLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQ-------------QLQLERANFEQK 652
Query: 263 EALNRVEELETENSHLTKRLDKLKNAKSALLK 294
E+ L EN+ L +L KL+ + +L+K
Sbjct: 653 EST-----LSDENNDLRTKLLKLEESNKSLIK 679
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 67 KEVEEKFRKAMILNAQ-LDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERL 125
+E EK ++ ++ + L ++ + QL+ K+R+E Y +L+REHKE HE
Sbjct: 206 REAAEKAKQDILETKENLSSELSISNIQLKEAKERLEAANASYQKLRREHKELALYHE-- 263
Query: 126 KREHASV 132
K+ H+ V
Sbjct: 264 KKTHSLV 270
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 227 IQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNRVEELETENSHLTKRLDKLK 286
+ L E + +N +H EYE++L + ++ + E V+E E+E S+ K ++
Sbjct: 325 LDLLEMKQQEENDRISHI--EYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYEEKI 382
Query: 287 NAKSALLKD 295
++ L+D
Sbjct: 383 SSLRIELED 391
Score = 25.8 bits (54), Expect = 7.4
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 42 VHSPRRSSEDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRI 101
++ R+S D ++ VK +HE + E R+A++L Q + L ++ ++L D +
Sbjct: 273 LNGERKSFGDFVEN--EVKSYKHEYANICESLRRALVL-IQGSCTEKILRFKEKIL-DLL 328
Query: 102 E-ELGEEYAQLQREHKEKCSTHERLKREHASVE 133
E + EE ++ E T ++LKR + +E
Sbjct: 329 EMKQQEENDRISHIEYENDLTVKKLKRRISELE 361
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 35.1 bits (77), Expect = 0.012
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 42 VHSPRRSSEDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAAL-GYQLELLKDR 100
+ S + E+ + N+ D + E++E ++ + L+N K G QL+L +
Sbjct: 1126 IKSLTKELENKEEKCQNLSDASLKYIELQEIHENLLLKVSDLENYKKKYEGLQLDL--EG 1183
Query: 101 IEELGEEYAQLQREHKEKCSTHERLKREHASVEREL 136
++++ + +L ++H++ HE L R+ AS + +L
Sbjct: 1184 LKDVDTNFQELSKKHRDLTFNHESLLRQSASYKEKL 1219
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 31.9 bits (69), Expect = 0.11
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 49 SEDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQL-ELLKDRIEEL 104
SE S + ++KD + + E E+K + + Q+ NDK ALG Q +LL++ +E L
Sbjct: 184 SEASLEIDSDIKDEKQKSLE-EQKIAPEIPVKQQIKNDKEALGIQAQQLLEEPVENL 239
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 31.5 bits (68), Expect = 0.15
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 220 SEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNRVEELETENSHLT 279
SEVR+L ++N+ + R+N H E + E L EI+ Q L + +ELE +
Sbjct: 105 SEVRRLSHEVNDLQTDREN---LKHQFEDQIEKLNSEISNQNSLILQKKDELEKSIQRCS 161
Query: 280 KRLDKLKNAKSA 291
+ +K+ + +SA
Sbjct: 162 ELEEKINSLESA 173
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.26
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 35 AALSPAGVHSPRRSSEDSADDGFNVKDLRHELKEVEEKFRKAMILN------AQLDNDKA 88
A L+ HSP + S ++AD+ ++ K+ EK ++ IL A+ + K
Sbjct: 1549 AELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEKTKE 1608
Query: 89 ALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLKRE 128
L QL RI+EL EE AQ + + +K++
Sbjct: 1609 ELENQLNEKSQRIKEL-EEQAQKNSSENTHDNIDDMIKQQ 1647
Score = 29.1 bits (62), Expect = 0.80
Identities = 17/77 (22%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 61 DLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCS 120
+L+H L V+E+F++ A + + A+ Q + + ++ Y QL+ K+KC+
Sbjct: 441 NLQHPL--VKEQFKRF----AHMQREIVAMSEQYQKSLEDCQKAKSRYEQLETLFKDKCT 494
Query: 121 THERLKREHASVERELE 137
++ ++E + R+++
Sbjct: 495 ENKHYEQETKDLARQVQ 511
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 194 QLLDDVGEGTLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNG---VANHHDQEYED 250
QL ++ E D+ LQ+ V ++ +++ K +++ EER AN + D
Sbjct: 882 QLQSNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPD 941
Query: 251 ELLIHEINFQTREALNRVEELETENSHLTKR 281
+ + I+ + ++ E E S++ ++
Sbjct: 942 NVEVEAISIELERTKEKLRMAELEKSNIQQK 972
Score = 26.6 bits (56), Expect = 4.3
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 208 LQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNR 267
L+KL +++L R K +L+E + Q +A+ + + N Q ++ +
Sbjct: 722 LEKLNDLEKSLVLSERS-KDELDESYKSLQEQLASKKIEVQNVSSQLSICNSQLEQSNHI 780
Query: 268 VEELETENSHLTKRLDKLK 286
V+ L++EN LT DKLK
Sbjct: 781 VDNLKSENLLLTSVKDKLK 799
Score = 25.8 bits (54), Expect = 7.4
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 197 DDVGEGTLDVRLQKLVSSKQALE-SEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIH 255
D+V + + L++ +K+ L +E+ K IQ + + + N ++++ L+
Sbjct: 941 DNVEVEAISIELER---TKEKLRMAELEKSNIQQKYLASEKTLEMMNETHEQFK-HLVES 996
Query: 256 EINFQTREALNRVEELETENSHLTKRLDKLKNAKSALLKDL 296
EI+ TRE ++ L +E L KR++ LK K + K+L
Sbjct: 997 EIS--TRE--EKITSLRSELLDLNKRVEVLKEEKESSSKEL 1033
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.3 bits (65), Expect = 0.35
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 59 VKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEK 118
+ + R++LK+ EE + + M DND + L+DR +EL +
Sbjct: 568 IDEYRNKLKDKEETYNEVMNAFQYKDNDLRRFHESINKLQDREKELTSNLEKKNLVISSL 627
Query: 119 CSTHERLKREHASVEREL 136
T L++E S+++ L
Sbjct: 628 RETVAMLEKERESIKKYL 645
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 59 VKDLRHELKEVE-EKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKE 117
++ L + L++V+ EK + + N + Y++ L++R++EL EE Q E
Sbjct: 251 IRFLENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTE 310
Query: 118 KCSTHERLKRE 128
K LKR+
Sbjct: 311 KEDEIATLKRQ 321
Score = 25.8 bits (54), Expect = 7.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 198 DVGEGTLDVRLQKLVSSKQAL-ESEVRKLKI--QLNEERAARQNGVANHHDQEYEDELLI 254
++ E +RL +S +AL E+ +R ++ +L R N + HD E+E L
Sbjct: 474 EIDEEKNHLRLLASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLT 533
Query: 255 HEINFQTREALNRVEELE 272
+I+ T+E + ELE
Sbjct: 534 LKIDSITKEKDRLINELE 551
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.9 bits (64), Expect = 0.46
Identities = 17/78 (21%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 59 VKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEK 118
+ DL+++L E + ++ L +QL+ DK Q+E L +RI +E + ++ +K +
Sbjct: 801 ISDLKNKLSEESTRLQE---LQSQLNQDKN----QIETLNERISAAADELSSMESINKNQ 853
Query: 119 CSTHERLKREHASVEREL 136
+ + K++ ++++ ++
Sbjct: 854 ANELKLAKQKCSNLQEKI 871
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.9 bits (64), Expect = 0.46
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 59 VKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEK 118
V+ L +EL + ++ + N L +L Q+ K++ E L + Y QL++EH +
Sbjct: 442 VRTLENELSQAGVNLQEQIHQNDDLIE---SLKNQILTWKNKYEALAKLYTQLRQEHLDL 498
Query: 119 CSTHERLKREHASVERELE 137
S +++++ + +S + ++
Sbjct: 499 LSKYKQIQLKASSAQEAID 517
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 194 QLLDDVGEGTLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELL 253
QL + + + + + L+K+ + ++ SE+ KLK EER + + + + E++
Sbjct: 218 QLEESIKQVSSSIELEKINAEQRLQISELEKLK-AAQEERIEKLSSNNRNVEILKEEKND 276
Query: 254 IHEINFQTREALNRVEELETENSHLTKRLDKLKN 287
+ ++ E ++V LE EN + L+ K+
Sbjct: 277 LESKLYRFEEYRDKVATLELENEKIQTELNSWKS 310
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 88 AALGYQLELLKDRIE----ELGEEYAQLQREHKEKCSTHERLKREHASVERELE 137
A+L +QLE LK+ ++ E E +LQR+ E+ L+ VE++LE
Sbjct: 58 ASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLE 111
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 196 LDDVGEGTLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIH 255
L D+G ++ R+ ++S+ Q+++ + +K K+Q + +N ++ E + E L
Sbjct: 49 LRDMGIESVGHRID-ILSAIQSMKKQ-QKDKLQQENKDQELKNIEESYKKLEEKTEHLSD 106
Query: 256 EINFQTREALNRVEELETENSHLTKRLDKLKNAKSALLKDL 296
+ N + RVE LETEN+ L K L+ L + LL+ +
Sbjct: 107 D-NVSLEK---RVEYLETENTKLVKTLNSLNSEFLQLLRKI 143
Score = 28.7 bits (61), Expect = 1.1
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 20 DMYTESVGRRTGSRLAALSPAGVHSPRRSSEDSADDGFNVKDLRHELKEVEEKFRKAMIL 79
DM ESVG R + LS + S ++ +D KD ELK +EE ++K
Sbjct: 51 DMGIESVGHR----IDILS--AIQSMKKQQKDKLQQ--ENKD--QELKNIEESYKKLEEK 100
Query: 80 NAQLDNDKAALGYQLELLKDR-------IEELGEEYAQLQREHKEKCSTHERLKREHAS 131
L +D +L ++E L+ + L E+ QL R+ +L E++S
Sbjct: 101 TEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNSEFLQLLRKIAINVKEGRQLTTENSS 159
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 218 LESEVRKLKI-QLNEERAARQNGVANHHDQEYEDELLIHEINF-QTREALNR 267
+E R+L + + N E NG +++ Q+Y+DE H+ + Q R L R
Sbjct: 1 MEKSARQLSVAEQNGESGRLNNGYTSNNIQQYKDETNRHQFEYNQNRNQLLR 52
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 91 GYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLK 126
G ++++ K R ++L +EYAQ ++ HKE S E K
Sbjct: 718 GSEIDVPKSRKKKLQKEYAQQEKLHKEYLSYIESNK 753
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 37 LSPAGVHSPRRSSEDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLEL 96
L +G+ ED D + DL + + +EE R I A+L + Y+ ++
Sbjct: 505 LYESGLEYDEDEEEDEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKV 564
Query: 97 LKDRIEELGEEYAQLQREHKEKCSTHERLKREHASVERELE 137
+ R +L EE + + +E+ R K + +++L+
Sbjct: 565 AQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLK 605
Score = 25.8 bits (54), Expect = 7.4
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 67 KEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLK 126
KE E + R+A L Q Q E K R E+ +L+RE ++K ER K
Sbjct: 608 KEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQ------RLKREQEKKQQELERQK 661
Query: 127 REHASVERELE 137
RE ++E E
Sbjct: 662 REEKQKQKERE 672
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 1.4
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 196 LDDVGEGTLDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIH 255
L++V E T RL +L+ S Q +EV+ LK+ L++ Q + + + + ++I
Sbjct: 449 LNEVQEETQ--RLSQLLISSQPALTEVKHLKLCLSDS----QEELLQLNAKLEKANIVID 502
Query: 256 EINFQTREALNRVEELETENSHLTKRLDKLK 286
E+N + +VEE + LT+ +LK
Sbjct: 503 ELNSAKLKLSKQVEEESSMKDDLTEMNQRLK 533
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/80 (23%), Positives = 36/80 (45%)
Query: 58 NVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKE 117
N+K ++ EEK A ++ L + E L+D+I+ L E LQ +
Sbjct: 295 NLKQAENKTISYEEKLSIAQNSINEIQTQNRDLKLETEKLQDQIKALLERNQSLQEALET 354
Query: 118 KCSTHERLKREHASVERELE 137
+ + L+ +A+ E E++
Sbjct: 355 VKNDEKNLREMNANYETEMK 374
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.4
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 208 LQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHH------DQEY---EDELLIHEIN 258
+++L ++ + E V ++K + +E R + +H +Q +DE+ +
Sbjct: 942 IEQLQAASKLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLR 1001
Query: 259 FQ--TREALNRVEELETENSHLTKRLDKLKNAKSALLK 294
+ T+++ RV L EN HL L +NA+ L+
Sbjct: 1002 CENITKDSETRVALLLEENKHLNNELSSHRNAEKQHLE 1039
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.5 bits (58), Expect = 2.4
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 197 DDVGEGTL--DVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEY--EDEL 252
+DV +L + KL+ +Q + E R +I N++ N Q+ E EL
Sbjct: 343 EDVDPASLLQNEEFHKLIEERQR-QHEERLKRINANKKALEELNQKKRELAQQQLKEQEL 401
Query: 253 LIHEINFQTREALNRVEELETENSHLTKRLDKL 285
L+ +I R R+ LET++S L D L
Sbjct: 402 LMQKIKETDRSGNKRLMLLETQHSLLKAEADCL 434
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 207 RLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHH-DQEY-EDELLIHEINFQTREA 264
+LQ LV LE E+R + + R + +A+H+ D+ Y E E L+ + + ++
Sbjct: 778 KLQLLVKDISNLEEEIRTIDRETEVLRIELPSSIAHHNLDEIYAEREKLLEKRGYLRKQ- 836
Query: 265 LNRVEELETENSHLTKRLD 283
+E + E + K++D
Sbjct: 837 ---IERTKLEETSFKKKID 852
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 208 LQKLVSSKQALESEVRKLKIQL--NEERAARQNGVANHHDQEYEDELLI 254
LQK+ + + L+ +R+L + N ER + +G + D+E +D+L I
Sbjct: 599 LQKINTMRCDLKGLIRRLSTEWSSNNERQSLSSGSNDEEDKENDDDLAI 647
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 249 EDELLIHEINFQTREALNRVEELETENSHLTKRLDKLKNAKSALLKDL 296
EDEL HE +R EELE + S LT L + +N L DL
Sbjct: 527 EDEL--HEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDL 572
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 257 INFQTREALNRVEELETENSHLTKRLDKLKNAKSALLKD 295
+ Q E + ++L +N+HL K+LD L + L+K+
Sbjct: 140 LRLQLSEKEDLHKKLSVDNAHLIKQLDLLSSNMKTLMKE 178
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 48 SSEDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAAL--GYQLELLKDRIEELG 105
S E +++ V +L K + RKA + + +AL L LL DR +++
Sbjct: 250 SDEPESEERDEVPELVSSSKSKSKTKRKARTALSSVSMSSSALFRNEGLTLLDDRFDKVE 309
Query: 106 EEYAQLQREHK 116
EEY ++ E +
Sbjct: 310 EEYTPIKDERE 320
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 61 DLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQ-LQREHKEKC 119
DL++EL + K ++ +L + ND L Q E L +I+E Q L+ K+
Sbjct: 1681 DLQNELADAVVKQKEYEVLYVEKSNDYNTLLLQKEKLMKQIDEFHVIRVQDLEEREKKDQ 1740
Query: 120 STHERLKREHASVERELE 137
+R ++E + +LE
Sbjct: 1741 LLFQRYQKELNGFKVQLE 1758
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 26.6 bits (56), Expect = 4.3
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 207 RLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALN 266
R QKL ++KQ +++ + K+ + +ER N QE E + + E+ Q +
Sbjct: 354 RNQKLEAAKQRMDNIREEYKV-ITQER--------NKKIQETEKKNAMIEMTEQKIAGMR 404
Query: 267 RVEELETENSHLTKRLDKLKNAKSALLKDL 296
EELE++ S +T +KLK+ + +L
Sbjct: 405 --EELESQISSITMEFEKLKSHVELYIAEL 432
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 218 LESEVRKLK----IQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNRVEELET 273
+++E RK K I++ EERA R +H + + L ++ +ALN ++
Sbjct: 10 VQAESRKKKKREQIKVREERAKRHEERLSHRNMSQMERQLSELTQLESSQALNAHDKQLL 69
Query: 274 ENSHLTKRLDKLKN 287
+N + K KN
Sbjct: 70 QNLQRDMAIMKKKN 83
>SPBC1604.16c |||RNA-binding protein, G-patch type
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 199
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 69 VEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLKRE 128
+E + R+A + ++ ND LG +++L K + + + Q Q +H + E L +
Sbjct: 136 LENQGRRAPVRAFRVKNDTIGLGTKIDLEKVAVNKCRKGKRQCQIQHSKDVRLKEALIKH 195
Query: 129 HAS 131
+S
Sbjct: 196 FSS 198
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/88 (19%), Positives = 39/88 (44%)
Query: 50 EDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELGEEYA 109
+ S D N+ D++ ++ E+ + + + + Q+ D Q E + L
Sbjct: 524 KSSRDVAANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLN 583
Query: 110 QLQREHKEKCSTHERLKREHASVERELE 137
LQ+++K+K E++ E + + +E
Sbjct: 584 ALQKQNKQKGEVLEQVVAESEAAKNMVE 611
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 209 QKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNRV 268
++ V K+A + + K KI +E +A + +E D+L+ + N EA+ +
Sbjct: 39 EEFVEEKEASQVQSTKSKIATSESEDVTLKNIAKKNKRERNDKLIPQQSN--ESEAIEKP 96
Query: 269 EELETENSHLTKRL 282
+ TE T L
Sbjct: 97 VQSTTEVELKTNEL 110
>SPAC343.13 |||glutamyl-tRNA amidotransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 253 LIHEINFQTREALNRVEE-LETENSHLTKRLDKLKNAKSALLK 294
LI E NF T +++ +E+ S +K+ ++LKN K++L+K
Sbjct: 453 LIQEKNFGTIGDSEKIKACVESVLSKHSKQFEELKNGKTSLIK 495
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 26.2 bits (55), Expect = 5.6
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 187 LVSHAAHQLLDDVGEGTLDVR-LQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHD 245
L SH +H L +D + V L++ Q L E + +Q + +A + ++ +
Sbjct: 742 LDSHLSHTLSEDP---LIKVEELEEKAKRLQELTYEYLRRSLQQPKLKAKKGASSSSTAE 798
Query: 246 QEYEDELLIHEINFQTREALNRVEELETENSH--LTKRLDKLK 286
+ EDE ++I T ALN ETE S +T+R L+
Sbjct: 799 SKVEDETFTNDIEPTT--ALNSTSTQETEKSRASVTQRPSSLQ 839
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.2 bits (55), Expect = 5.6
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 211 LVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNRVEE 270
++ SK ALE + +L Q+ E + + + E E + I E + E L +
Sbjct: 298 IMKSKVALELQSSQLSRQI--EFSKKDESSKLNILSELESK--ISEKENELSEILPKYNA 353
Query: 271 LETENSHLTKRLDKLKNAKSALL 293
+ +E L KR+ LKN K +LL
Sbjct: 354 IVSEADDLNKRIMLLKNQKQSLL 376
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.8 bits (54), Expect = 7.4
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 45 PRRSSEDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEEL 104
P+R ++D +E ++V + K + LN + ++ Q +LK + EE
Sbjct: 588 PKRRRLSNSDTPSETTTPNNEQEQVSNQANK-VDLNKIISAAMESVN-QKNVLKAQKEE- 644
Query: 105 GEEYAQLQREHKEKCSTHERLKREHA 130
E AQ +RE K + + E LKR HA
Sbjct: 645 EERIAQQKREEKRRLAYEESLKR-HA 669
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 93 QLELLKDRIEELGEEYAQLQREHKEKCSTHERLKREHASVE 133
+L+ +K+R +EL E + + H EK T + K + +E
Sbjct: 44 KLDEIKEREKELKREKEEQRAAHAEKIRTRRQAKADRERME 84
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 97 LKDRIEELGEEYAQLQREHKEKCSTHERLKRE-HASVERELE 137
++ RI+E E A+ + E K + E KRE +RE E
Sbjct: 533 IQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAE 574
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 84 DNDKAALGYQLELLKDRIEELGEEYAQLQREHKEKCSTHERLKREHASVE 133
D+ AA +L ++ +I+EL +E + ++ +KEKC + L + E
Sbjct: 79 DDLAAATPEELAEMEKQIQELKDEVSVVKTLYKEKCIELQALNNSLSPAE 128
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 9.8
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 204 LDVRLQKLVSSKQALESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTRE 263
+D++ + + +S A +S + + QLN ER AR+N + ++ +E + + + +
Sbjct: 411 VDIQKRDIQNSINAAKSCLDVYREQLNTER-ARENNLGGSQIEKRANE--SNNLQREIAD 467
Query: 264 ALNRVEELETENSHLTKRLDKLKNAKSALL 293
++ ELE++ + L L ++ ++LL
Sbjct: 468 LSEQIVELESKRNDLHSALLEMGGNLTSLL 497
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 50 EDSADDGFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLE 95
ED DD F+ + R L+E E + + L LD KA + + E
Sbjct: 920 EDMEDDQFSQRCERMALREAERRKLRHGKLQKHLDETKADMQFTSE 965
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 246 QEYEDELLIHEINFQTREALNR--VEELETENSHLTKRLDKLKNAKSALLKDL 296
+ YED L + ++LNR +EL+ +NS ++++K+K K L ++
Sbjct: 392 KRYEDSLKKSK-TLDKVDSLNRKMAKELDRKNSKELQKINKVKRTKEECLSEI 443
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 242 NHHDQEYEDELLIHEINFQTREALNRVEELETENSHLTKRLDKLKN 287
N + E LI + Q + ++VE L T N +T+ L+K K+
Sbjct: 272 NDYRPHQSRESLIMLLEKQLKHEESQVELLRTHNRQMTETLEKYKS 317
>SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 9.8
Identities = 9/30 (30%), Positives = 22/30 (73%)
Query: 224 KLKIQLNEERAARQNGVANHHDQEYEDELL 253
++++QL +E+ ++ +A+ +D+E DE+L
Sbjct: 202 EIRVQLEDEKFDAEHYMADFYDREMIDEIL 231
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 219 ESEVRKLKIQLNEERAARQNGVANHHDQEYEDELLIHEINFQTREALNRVEELETENSHL 278
ES+++++ ++ ++E + R+ +A+ + E + +EA + + +ETE + L
Sbjct: 265 ESKIKRVALETSQEESDRE--IADRRSASEQAHEADDEKAIKRKEAFDALLNIETEFTFL 322
Query: 279 TKRL 282
RL
Sbjct: 323 RNRL 326
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/64 (25%), Positives = 23/64 (35%)
Query: 233 RAARQNGVANHHDQEYEDELLIHEINFQTREALNRVEELETENSHLTKRLDKLKNAKSAL 292
R Q G H EYE L H + E + + L+ L +LK + L
Sbjct: 283 RRCEQEGAPAHIVSEYEQLLQFHVATYMDNEIAGQPQALQKSGRPLKSIRARLKGKEGRL 342
Query: 293 LKDL 296
+L
Sbjct: 343 RGNL 346
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 9.8
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 231 EERAARQNGVANHHDQEYEDELLIHEINFQTRE--ALNR-VEELETE-NSHLTKRLDKLK 286
E RAA + + ++E E+E +E + +TRE NR V E +E S + KR
Sbjct: 300 EPRAAGEESASEEEEEEEEEEEEENEADDETRENKRQNRLVREFISELESSIQKRRKDAD 359
Query: 287 NAKSALLKD 295
A + +L++
Sbjct: 360 EATNPILRN 368
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.128 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,009,701
Number of Sequences: 5004
Number of extensions: 38282
Number of successful extensions: 254
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 185
Number of HSP's gapped (non-prelim): 94
length of query: 296
length of database: 2,362,478
effective HSP length: 72
effective length of query: 224
effective length of database: 2,002,190
effective search space: 448490560
effective search space used: 448490560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)
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