GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002815-TA|BGIBMGA002815-PA|undefined
         (102 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   0.63 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   5.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   5.9  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 0.63
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 49  GQYVEENTPKVNGHNSQMTPLEGPVLTDV 77
           GQ  E   P V+ H    TP E P+  +V
Sbjct: 403 GQMFEAPIPNVSPHYVTPTPPEAPLFQNV 431


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 52  VEENTPKVNGHNSQMTPLEGPV 73
           + +N PK   HN  + P   PV
Sbjct: 226 IPQNNPKNKQHNFNLPPGAIPV 247


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 61  GHNSQMTPLE 70
           GHNS + PLE
Sbjct: 719 GHNSPLFPLE 728


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.305    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,358
Number of Sequences: 317
Number of extensions: 1215
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 102
length of database: 114,650
effective HSP length: 48
effective length of query: 54
effective length of database: 99,434
effective search space:  5369436
effective search space used:  5369436
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.7 bits)
S2: 38 (19.4 bits)