GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002815-TA|BGIBMGA002815-PA|undefined
         (102 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    28   0.058
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   0.54 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   0.95 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   0.95 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   3.8  
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    21   6.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    21   6.7  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    21   8.9  

>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 28.3 bits (60), Expect = 0.058
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 9    EESGDAFTDGDFEDSGDETVVENNKSHIP---VNDTINEEVKNGQY--VEENTPKVNGHN 63
            EE G    + D +D G+E  VEN+   +    + D++NE   N  +  V++ +   +G N
Sbjct: 1724 EEDGSDKEEDDDDDDGEEDDVENDDPELSSQLMVDSMNENASNCSWEAVDDRSAPSSGAN 1783

Query: 64   S 64
            S
Sbjct: 1784 S 1784


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 5    DNSDEESGDAFTDGDFEDSGDETVVENNKSHIPVN 39
            D+ D+E  D   D      G+E   +N   +IP N
Sbjct: 1827 DDEDDEDDDDDDDDTTTGEGNEHEADNGSCYIPYN 1861


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 25  DETVVENNKSHIPVNDTINEEVKNGQYVEENTPKVNGHNSQMTPLEGPVLTDVRRDSYAE 84
           DE+++  +     +N    EE++    V    P  +  + + + L   V+T+VR+ SY +
Sbjct: 139 DESLIFGSGISSGINFDKFEEIQ--VRVSGENPPDHVESFERSGLREEVMTNVRKSSYTK 196

Query: 85  QTP 87
            TP
Sbjct: 197 PTP 199


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 15/54 (27%), Positives = 20/54 (37%)

Query: 34  SHIPVNDTINEEVKNGQYVEENTPKVNGHNSQMTPLEGPVLTDVRRDSYAEQTP 87
           SH PVN   N     G  +  N     G     TP     L + + ++   QTP
Sbjct: 372 SHSPVNGYGNNHPTGGSNLPGNNNGGAGGGGSNTPSNHGALGNTQNNAGGNQTP 425


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 8   DEESGD-AFTDGDFEDSGDETVVENNKSHIPVNDTINEEVKNGQYVEENTPKVNG 61
           +E S D  +T+G   D GD +   N+ +   V  +  +  ++   +  ++ KV G
Sbjct: 548 EERSNDNRYTNGADRDRGDRSKGMNHTNSFVVEHSRRDRDRDRDRMRSDSGKVGG 602


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 15  FTDGDFEDSGDETVVENNKSHIPVNDTINEEV 46
           +TD   ED  +E  VE     +  ND I   +
Sbjct: 154 YTDSPLEDDAEEPPVEGIDPALRQNDGIGGSI 185


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 65  QMTPLEGPVLTDVRRDSYAEQTPSIVGILGD 95
           Q T  +G VL  + R     + P I+G LG+
Sbjct: 579 QSTRSQGKVLDALMRQKNEGRIPGILGRLGN 609


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
          phosphorylase protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 46 VKNGQYVEENTPKVNGHNSQ 65
          ++NG+      P  NGH+ Q
Sbjct: 7  LQNGKASTNGVPHANGHHQQ 26


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.305    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,239
Number of Sequences: 2123
Number of extensions: 5166
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 102
length of database: 516,269
effective HSP length: 55
effective length of query: 47
effective length of database: 399,504
effective search space: 18776688
effective search space used: 18776688
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.5 bits)
S2: 42 (21.0 bits)