Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002813-TA|BGIBMGA002813-PA|IPR001372|Dynein light chain,
type 1
(79 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. 124 3e-29
CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. 124 3e-29
BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light... 124 3e-29
BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light... 124 3e-29
AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing ... 124 3e-29
AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein pr... 124 3e-29
AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light... 124 3e-29
CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. 122 1e-28
AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, a... 122 2e-28
U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light ... 61 6e-10
CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. 61 6e-10
CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. 61 6e-10
BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC... 61 6e-10
BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC... 61 6e-10
BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC... 61 6e-10
BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC... 59 2e-09
AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of ne... 59 2e-09
Y00816-1|CAA68755.1| 2039|Homo sapiens protein ( Human mRNA for ... 29 2.3
X14362-1|CAA32541.1| 559|Homo sapiens protein ( Human CR1 mRNA ... 29 2.3
M31241-1|AAD15289.1| 162|Homo sapiens complement receptor 1 pro... 29 2.3
L17418-2|AAB60694.1| 2039|Homo sapiens complement receptor 1 pro... 29 2.3
L17418-1|AAB60695.1| 2489|Homo sapiens complement receptor 1 pro... 29 2.3
AL691452-6|CAI16728.1| 559|Homo sapiens complement component (3... 29 2.3
AL691452-5|CAI16727.1| 559|Homo sapiens complement component (3... 29 2.3
AL691452-4|CAI16726.1| 559|Homo sapiens complement component (3... 29 2.3
AL691452-3|CAI16723.1| 2039|Homo sapiens complement component (3... 29 2.3
AL691452-2|CAI16725.1| 2039|Homo sapiens complement component (3... 29 2.3
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 29 2.3
AL137789-3|CAI16042.1| 2039|Homo sapiens complement component (3... 29 2.3
AL137789-2|CAI16044.1| 2039|Homo sapiens complement component (3... 29 2.3
AL137789-1|CAI16043.1| 2039|Homo sapiens complement component (3... 29 2.3
>CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light
polypeptide 4 protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing
protein 27 protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein
protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 124 bits (300), Expect = 3e-29
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 122 bits (295), Expect = 1e-28
Identities = 50/79 (63%), Positives = 64/79 (81%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR E +EL VTACEKF+ NNE AA+M+ E+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4,
axonemal variant protein.
Length = 105
Score = 122 bits (293), Expect = 2e-28
Identities = 50/79 (63%), Positives = 64/79 (81%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
M EEMR +EL VTACEKF+ NNE AA+M+KE+MDKKFG ++HVV+GE +GFEIT+E
Sbjct: 27 MPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVK 86
Query: 61 TICYMYFGGNQAICIWKCS 79
+ Y+YFGG A+C+WKCS
Sbjct: 87 NLLYLYFGGTLAVCVWKCS 105
>U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light
chain 1 protein.
Length = 89
Score = 60.9 bits (141), Expect = 6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSEEM+ ++VE + A EK+ ++AA + KE DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKDIAAHIKKE-FDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 60.9 bits (141), Expect = 6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSEEM+ ++VE + A EK+ ++AA + KE DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKDIAAHIKKE-FDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 60.9 bits (141), Expect = 6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSEEM+ ++VE + A EK+ ++AA + KE DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKDIAAHIKKE-FDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 60.9 bits (141), Expect = 6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSEEM+ ++VE + A EK+ ++AA + KE DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKDIAAHIKKE-FDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 60.9 bits (141), Expect = 6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSEEM+ ++VE + A EK+ ++AA + KE DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKDIAAHIKKE-FDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 60.9 bits (141), Expect = 6e-10
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSEEM+ ++VE + A EK+ ++AA + KE DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKDIAAHIKKE-FDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain,
LC8-type 2 protein.
Length = 89
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSE+M+ +AV+ + A EK+ ++AA +K+ DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEDMQQDAVDCATQAMEKYNIEKDIAA-YIKKEFDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of
neuronal nitric oxide synthase protein.
Length = 89
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 1 MSEEMRTEAVELSVTACEKFAQNNELAARMVKESMDKKFGPAFHVVVGESYGFEITYECT 60
MSE+M+ +AV+ + A EK+ ++AA +K+ DKK+ P +H +VG ++G +T+E
Sbjct: 13 MSEDMQQDAVDCATQAMEKYNIEKDIAA-YIKKEFDKKYNPTWHCIVGRNFGSYVTHETK 71
Query: 61 TICYMYFGGNQAICIWK 77
Y Y G AI ++K
Sbjct: 72 HFIYFYL-GQVAILLFK 87
>Y00816-1|CAA68755.1| 2039|Homo sapiens protein ( Human mRNA for
complement receptor type 1 (CR1, C3b/C4b receptor,
CD35). ).
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>X14362-1|CAA32541.1| 559|Homo sapiens protein ( Human CR1 mRNA for
C3b/C4b receptor secreted form. ).
Length = 559
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 91 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 121
>M31241-1|AAD15289.1| 162|Homo sapiens complement receptor 1
protein.
Length = 162
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>L17418-2|AAB60694.1| 2039|Homo sapiens complement receptor 1
protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>L17418-1|AAB60695.1| 2489|Homo sapiens complement receptor 1
protein.
Length = 2489
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>AL691452-6|CAI16728.1| 559|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 91 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 121
>AL691452-5|CAI16727.1| 559|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 91 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 121
>AL691452-4|CAI16726.1| 559|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 91 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 121
>AL691452-3|CAI16723.1| 2039|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>AL691452-2|CAI16725.1| 2039|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>AL137789-3|CAI16042.1| 2039|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>AL137789-2|CAI16044.1| 2039|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
>AL137789-1|CAI16043.1| 2039|Homo sapiens complement component
(3b/4b) receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 44 HVVVGESYGFEITYECTTICYMYFGGNQAICI 75
HV+ G +G +I Y CT Y G + A CI
Sbjct: 116 HVIKGIQFGSQIKYSCTK-GYRLIGSSSATCI 146
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.132 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,688,655
Number of Sequences: 224733
Number of extensions: 344533
Number of successful extensions: 707
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 659
Number of HSP's gapped (non-prelim): 54
length of query: 79
length of database: 73,234,838
effective HSP length: 58
effective length of query: 21
effective length of database: 60,200,324
effective search space: 1264206804
effective search space used: 1264206804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)
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