Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002812-TA|BGIBMGA002812-PA|IPR006155|Machado-Joseph
disease protein MJD
(241 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-860|AAF46138.3| 221|Drosophila melanogaster CG3781-PA ... 209 2e-54
AY070825-1|AAL48447.2| 194|Drosophila melanogaster AT26957p pro... 208 7e-54
AE014134-112|AAO41650.1| 1488|Drosophila melanogaster CG4297-PB,... 33 0.47
AE014134-111|AAF51491.1| 1403|Drosophila melanogaster CG4297-PA,... 33 0.47
AY079187-1|AAL91092.1| 1503|Drosophila melanogaster VEGF-recepto... 30 2.5
AY079184-1|AAL91089.1| 1474|Drosophila melanogaster VEGFR-A spli... 30 2.5
AY069789-1|AAL39934.1| 1461|Drosophila melanogaster SD03187p pro... 30 2.5
AJ250859-1|CAC39205.1| 1509|Drosophila melanogaster PDGF/VEGF re... 30 2.5
AE014134-1441|AAS64657.1| 1215|Drosophila melanogaster CG8222-PF... 30 2.5
AE014134-1440|AAO41166.1| 1461|Drosophila melanogaster CG8222-PC... 30 2.5
AE014134-1439|AAF52626.2| 1509|Drosophila melanogaster CG8222-PA... 30 2.5
AE014134-1438|AAS64656.1| 1509|Drosophila melanogaster CG8222-PD... 30 2.5
AE014134-1437|AAN11158.1| 1509|Drosophila melanogaster CG8222-PB... 30 2.5
AE014134-1436|AAS64655.1| 1503|Drosophila melanogaster CG8222-PE... 30 2.5
BT015998-1|AAV36883.1| 204|Drosophila melanogaster RE44027p pro... 29 4.4
AE014134-151|AAN10485.1| 204|Drosophila melanogaster CG31658-PA... 29 4.4
AE014298-2923|AAF49012.1| 804|Drosophila melanogaster CG12531-P... 29 5.8
BT001698-1|AAN71453.1| 650|Drosophila melanogaster RE60089p pro... 29 7.6
AE013599-3783|AAM68294.1| 650|Drosophila melanogaster CG3167-PB... 29 7.6
AE013599-3782|AAF47143.1| 650|Drosophila melanogaster CG3167-PA... 29 7.6
>AE014298-860|AAF46138.3| 221|Drosophila melanogaster CG3781-PA
protein.
Length = 221
Score = 209 bits (511), Expect = 2e-54
Identities = 93/180 (51%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Query: 10 IYHEKQIKELCALHALNNLFQTRGTFSKSELDAICSRLSPNVWINPHRSLLGLGNYDINV 69
IYHE+Q + LC LHALNNLFQ FSKSELD C+ L+P W+NPHRS +G GNYD+NV
Sbjct: 39 IYHERQTRHLCGLHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNV 98
Query: 70 IMAALQKKGCEAIWFDKRKDPGCLDLANICGFILNVPSDYKLG-FVMLPLRRRHWITIRQ 128
IM ALQ++ CEA+WFD+R+DP CL+L+ I GFILNVP+ LG ++ LP RHW+ +R+
Sbjct: 99 IMYALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHMRHWLALRR 158
Query: 129 IQGNFYNLDSKLDSPQLIGRSCDLIAYLKEQLDSKEKELFIVVSKEVEEKQLWMHQYVLP 188
+ G++YNLDSKL P+ +G + +L QL + ELF+V+ +E + K +++LP
Sbjct: 159 LNGSYYNLDSKLREPKCLGTEQQFLEFLATQL-QMDHELFLVLDEETDCKDKSQQRWLLP 217
>AY070825-1|AAL48447.2| 194|Drosophila melanogaster AT26957p
protein.
Length = 194
Score = 208 bits (507), Expect = 7e-54
Identities = 93/180 (51%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 10 IYHEKQIKELCALHALNNLFQTRGTFSKSELDAICSRLSPNVWINPHRSLLGLGNYDINV 69
IYHE Q + LC LHALNNLFQ FSKSELD C+ L+P W+NPHRS +G GNYD+NV
Sbjct: 12 IYHELQTRHLCGLHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNV 71
Query: 70 IMAALQKKGCEAIWFDKRKDPGCLDLANICGFILNVPSDYKLG-FVMLPLRRRHWITIRQ 128
IM ALQ++ CEA+WFD+R+DP CL+L+ I GFILNVP+ LG ++ LP RHW+ +R+
Sbjct: 72 IMYALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHMRHWLALRR 131
Query: 129 IQGNFYNLDSKLDSPQLIGRSCDLIAYLKEQLDSKEKELFIVVSKEVEEKQLWMHQYVLP 188
+ G++YNLDSKL P+ +G + +L QL + ELF+V+ +E + K +++LP
Sbjct: 132 LNGSYYNLDSKLREPKCLGTEQQFLEFLATQL-QMDHELFLVLDEETDCKDKSQQRWLLP 190
>AE014134-112|AAO41650.1| 1488|Drosophila melanogaster CG4297-PB,
isoform B protein.
Length = 1488
Score = 32.7 bits (71), Expect = 0.47
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 171 VSKEVEEKQLWMHQYVLPTPEPNYCPKLPLNGESPSESISSN 212
V + E+ Q W+ V+PTPEP ++P +ES SS+
Sbjct: 1118 VQNKEEQIQAWLKNSVVPTPEPEIEAEIPKQEAGVAESSSSS 1159
>AE014134-111|AAF51491.1| 1403|Drosophila melanogaster CG4297-PA,
isoform A protein.
Length = 1403
Score = 32.7 bits (71), Expect = 0.47
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 171 VSKEVEEKQLWMHQYVLPTPEPNYCPKLPLNGESPSESISSN 212
V + E+ Q W+ V+PTPEP ++P +ES SS+
Sbjct: 1033 VQNKEEQIQAWLKNSVVPTPEPEIEAEIPKQEAGVAESSSSS 1074
>AY079187-1|AAL91092.1| 1503|Drosophila melanogaster VEGF-receptor B
protein.
Length = 1503
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1425 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1453
>AY079184-1|AAL91089.1| 1474|Drosophila melanogaster VEGFR-A splice
form A protein.
Length = 1474
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1396 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1424
>AY069789-1|AAL39934.1| 1461|Drosophila melanogaster SD03187p protein.
Length = 1461
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1383 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1411
>AJ250859-1|CAC39205.1| 1509|Drosophila melanogaster PDGF/VEGF
receptor protein.
Length = 1509
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1431 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1459
>AE014134-1441|AAS64657.1| 1215|Drosophila melanogaster CG8222-PF,
isoform F protein.
Length = 1215
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1137 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1165
>AE014134-1440|AAO41166.1| 1461|Drosophila melanogaster CG8222-PC,
isoform C protein.
Length = 1461
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1383 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1411
>AE014134-1439|AAF52626.2| 1509|Drosophila melanogaster CG8222-PA,
isoform A protein.
Length = 1509
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1431 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1459
>AE014134-1438|AAS64656.1| 1509|Drosophila melanogaster CG8222-PD,
isoform D protein.
Length = 1509
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1431 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1459
>AE014134-1437|AAN11158.1| 1509|Drosophila melanogaster CG8222-PB,
isoform B protein.
Length = 1509
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1431 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1459
>AE014134-1436|AAS64655.1| 1503|Drosophila melanogaster CG8222-PE,
isoform E protein.
Length = 1503
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 179 QLWMHQYVLPTPEPNYCPKLPLNGESPSES 208
Q QYV PTP P + + LNGE PSE+
Sbjct: 1425 QALKQQYVTPTPSPRHHVETKLNGE-PSEN 1453
>BT015998-1|AAV36883.1| 204|Drosophila melanogaster RE44027p
protein.
Length = 204
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 153 IAYLKEQLDSKEKELFIVVSKEVEEKQL 180
I ++++QL +EKEL I ++K ++ +QL
Sbjct: 132 ITFMEQQLKKQEKELEIAMAKSIKNRQL 159
>AE014134-151|AAN10485.1| 204|Drosophila melanogaster CG31658-PA
protein.
Length = 204
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 153 IAYLKEQLDSKEKELFIVVSKEVEEKQL 180
I ++++QL +EKEL I ++K ++ +QL
Sbjct: 132 ITFMEQQLKKQEKELEIAMAKSIKNRQL 159
>AE014298-2923|AAF49012.1| 804|Drosophila melanogaster CG12531-PA
protein.
Length = 804
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 162 SKEKELFIVVSKEVEEKQLWMHQYVLPTPEPNYCPK 197
S + EL + SK VEEK +W Q T EP + K
Sbjct: 677 SDDLELHVDYSKNVEEKAVWDQQSYNQTHEPVWASK 712
>BT001698-1|AAN71453.1| 650|Drosophila melanogaster RE60089p
protein.
Length = 650
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 163 KEKELFIVVSKEVEEKQLW--MHQYVLPTPEPNYCPKLPLNGESPSESISSNGQYDYNNR 220
K +++ SKE +E + HQY P P NY L N + SS +
Sbjct: 51 KRSNKYVLYSKEQQESPPFPQYHQYHAPQPPQNYANGLDNNNDLDQTGGSSAYNRSLDES 110
Query: 221 DAECLKLN 228
D+ L+L+
Sbjct: 111 DSSPLQLS 118
>AE013599-3783|AAM68294.1| 650|Drosophila melanogaster CG3167-PB,
isoform B protein.
Length = 650
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 163 KEKELFIVVSKEVEEKQLW--MHQYVLPTPEPNYCPKLPLNGESPSESISSNGQYDYNNR 220
K +++ SKE +E + HQY P P NY L N + SS +
Sbjct: 51 KRSNKYVLYSKEQQESPPFPQYHQYHAPQPPQNYANGLDNNNDLDQTGGSSAYNRSLDES 110
Query: 221 DAECLKLN 228
D+ L+L+
Sbjct: 111 DSSPLQLS 118
>AE013599-3782|AAF47143.1| 650|Drosophila melanogaster CG3167-PA,
isoform A protein.
Length = 650
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 163 KEKELFIVVSKEVEEKQLW--MHQYVLPTPEPNYCPKLPLNGESPSESISSNGQYDYNNR 220
K +++ SKE +E + HQY P P NY L N + SS +
Sbjct: 51 KRSNKYVLYSKEQQESPPFPQYHQYHAPQPPQNYANGLDNNNDLDQTGGSSAYNRSLDES 110
Query: 221 DAECLKLN 228
D+ L+L+
Sbjct: 111 DSSPLQLS 118
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.136 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,517,633
Number of Sequences: 52641
Number of extensions: 607924
Number of successful extensions: 1423
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1412
Number of HSP's gapped (non-prelim): 20
length of query: 241
length of database: 24,830,863
effective HSP length: 83
effective length of query: 158
effective length of database: 20,461,660
effective search space: 3232942280
effective search space used: 3232942280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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