GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002809-TA|BGIBMGA002809-PA|undefined
         (131 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.70 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   2.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   3.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   6.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   6.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   6.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 88   VFYRGKEKLSDVDPQKVNKFIEFLKRFSANLKEGVQDAKKQLKK 131
            +F  G    S +  +K+ KF++ +  F   LK+ V   KK+ ++
Sbjct: 1167 IFTEGIWICSLIHRKKIVKFLDGIMAFDIQLKQVVNYKKKKFQR 1210


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/35 (25%), Positives = 20/35 (57%)

Query: 36  VERDFHDNASKIRESHECSHRVLELQKRLEIAKAQ 70
           + R   ++  + R++ E   + L ++K LE+ +AQ
Sbjct: 577 IMRSITESGGRRRQTREKRKKSLPVRKLLELERAQ 611


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory
          receptor candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)

Query: 84 LAVSVFYRGKE 94
          +AVSVFYR K+
Sbjct: 46 VAVSVFYRAKD 56


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory
          receptor candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)

Query: 84 LAVSVFYRGKE 94
          +AVSVFYR K+
Sbjct: 46 VAVSVFYRAKD 56


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 12  NYSPLTVEDVDVDFLPIVYDIIRSVERDFH 41
           N  P  V   D+  +  V DII  +  DFH
Sbjct: 176 NSIPGEVGGYDIPAMSNVLDIINVMTYDFH 205


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 26  LPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQK 62
           L I+ D +RS       NA K+R   +    VL   K
Sbjct: 253 LIIMCDCVRSEASKVVKNAQKLRHKFDLKTLVLNFPK 289


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 110 FLKRFSANLKEGVQDAKKQLKK 131
           F ++F A      QD  K L+K
Sbjct: 544 FYRKFCARYSAATQDLNKLLRK 565


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 89 FYRGKEKLS 97
          FYRG++KLS
Sbjct: 20 FYRGRKKLS 28


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 72  IAESYPVRRAAQLAVSVFYRGKEKLSDVDPQKVNKFI 108
           + E+ P RR+  L   V      K S V P    KFI
Sbjct: 11  LGEAIPKRRSVFLESGVNSADSFKASKVGPAPPIKFI 47


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.131    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,611
Number of Sequences: 317
Number of extensions: 927
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 131
length of database: 114,650
effective HSP length: 51
effective length of query: 80
effective length of database: 98,483
effective search space:  7878640
effective search space used:  7878640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)