Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002809-TA|BGIBMGA002809-PA|undefined
(131 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.025
SB_6740| Best HMM Match : RVT_1 (HMM E-Value=4.5e-22) 35 0.025
SB_41708| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.043
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 30 0.70
SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044) 30 0.70
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 30 0.70
SB_48714| Best HMM Match : TrmB (HMM E-Value=0.71) 29 0.93
SB_46064| Best HMM Match : PH (HMM E-Value=1.9e-21) 29 0.93
SB_55299| Best HMM Match : DUF1665 (HMM E-Value=5.9) 29 1.6
SB_19119| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1) 28 2.8
SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) 27 5.0
SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0) 27 5.0
SB_14121| Best HMM Match : HTH_8 (HMM E-Value=6.2) 27 5.0
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 27 5.0
SB_7153| Best HMM Match : 6PF2K (HMM E-Value=1.9e-25) 27 6.6
SB_38146| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_2860| Best HMM Match : IncA (HMM E-Value=0.41) 27 6.6
SB_45224| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
>SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 34.7 bits (76), Expect = 0.025
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 12 NYSPLTVED-VDVDFLPIVYD-IIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKA 69
NY P+TV VD F ++ + ER F N+S R+SH C ++ L + + A+
Sbjct: 358 NYRPITVLPCVDTVFEKLICSQVAEGFERHFFTNSSAYRKSHSCETTLINLIEGWKKARD 417
Query: 70 QKIAES 75
K++ S
Sbjct: 418 NKLSVS 423
>SB_6740| Best HMM Match : RVT_1 (HMM E-Value=4.5e-22)
Length = 884
Score = 34.7 bits (76), Expect = 0.025
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 12 NYSPLTVED-VDVDFLPIVYD-IIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKA 69
NY P+TV VD F ++ + ER F N+S R+SH C ++ L + + A+
Sbjct: 218 NYRPITVLPCVDTVFEKLICSQVAEGFERHFFTNSSAYRKSHSCETTLINLIEGWKKARD 277
Query: 70 QKIAES 75
K++ S
Sbjct: 278 NKLSVS 283
>SB_41708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 33.9 bits (74), Expect = 0.043
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 12 NYSPLTVED-VDVDFLPIVYD-IIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKA 69
NY P+TV VD F ++ + ER F N+S R+SH C ++ L + + A+
Sbjct: 155 NYRPITVLPCVDKVFEKLICSQVAEGFERHFFTNSSAYRKSHSCETTLINLIEGWKKARD 214
Query: 70 QKIAES 75
K++ S
Sbjct: 215 NKLSVS 220
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 29.9 bits (64), Expect = 0.70
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 33 IRSVERDFHDNASKI---RESHECSH-RVLELQKRLEIAKAQKIAESYPVRRAAQLAVSV 88
I+ VE+D D A K + S + S VLE + EI K+ A + VR A +
Sbjct: 51 IKKVEKD--DKALKEDNDKMSQDLSSLEVLEQKSETEIRKSAPFATNKDVRHQAYQHIRD 108
Query: 89 FYRGKEKLSD---VDPQKVNKFIEFLKRFSANLKEGVQDAKKQLKK 131
+ K +L+D + Q+ K +E KR +E + K+Q ++
Sbjct: 109 YEADKRRLADSIEIRRQEQAKTLEEKKRQRLRSREAAMEEKRQKER 154
>SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044)
Length = 1693
Score = 29.9 bits (64), Expect = 0.70
Identities = 14/75 (18%), Positives = 35/75 (46%)
Query: 32 IIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVSVFYR 91
++ +++R D S+ R H C+ R ++ A+ + +AE+ R A + +
Sbjct: 266 LLNAIKRRQSDKLSETRSRHSCTSRHSSVKSTASSARVKALAEAKEAREEAHYERLIAKK 325
Query: 92 GKEKLSDVDPQKVNK 106
E+ + +++N+
Sbjct: 326 YLERNEGEEEEEINR 340
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 29.9 bits (64), Expect = 0.70
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 32 IIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVSVFYR 91
+I+ +++ + S++RE+ + L L A K+ +++ Q S R
Sbjct: 145 VIQDLQQGGESSVSELREARATNE---SLVSELRNANEDKVTLKEQLKQMEQAIESQRQR 201
Query: 92 GKEKLSDVDPQKVN---KFIEFLKRFSANLKEGVQDAKKQLKK 131
+++ + + + K + ++ S+ +E +QD +KQLKK
Sbjct: 202 HSDEIQRISAEHEHQCAKLSQKIESLSSEQEEAIQDLEKQLKK 244
>SB_48714| Best HMM Match : TrmB (HMM E-Value=0.71)
Length = 199
Score = 29.5 bits (63), Expect = 0.93
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 58 LELQKRLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKLSDVDPQ---KVNKFIEFLKRF 114
L L+K+LE+ K Q+ E + A ++A R +E+L Q +V KF +F+K
Sbjct: 104 LLLKKQLEVEKVQEDLEIKRQQFAERMAACK--RKEEELKKKQLQIRDRVGKFEKFIKEN 161
Query: 115 SANLKEGVQDAKKQLK 130
A + VQ + +LK
Sbjct: 162 EAKRRRAVQKYQTELK 177
>SB_46064| Best HMM Match : PH (HMM E-Value=1.9e-21)
Length = 319
Score = 29.5 bits (63), Expect = 0.93
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 47 IRESHECSHRVLELQKRLEIAKAQKIAESYPVRR 80
+ + + CS KR+E+ KA+K A S P+R+
Sbjct: 283 LTQFYGCSFMTHYKSKRIEVGKARKTASSLPIRK 316
>SB_55299| Best HMM Match : DUF1665 (HMM E-Value=5.9)
Length = 207
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 37 ERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKL 96
++ +NA K ++S+ + R+LE Q E+ K + P+ R +AV +FYRG +
Sbjct: 92 QKKLFENAYKEKKSY--AKRILESQNS-EL----KFNKLKPIVR--DVAVDIFYRGDYSM 142
Query: 97 SDVDPQKVNKFIEFLKRFSAN 117
S +P K + + K F N
Sbjct: 143 SKKNPAKRERSKKIQKVFEKN 163
>SB_19119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 7 HSEQTNYSPLTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLE 65
H E T PL +E++D D ++ ++ +E FH+ KIR S + S R L+ LE
Sbjct: 988 HEEHTRLEPLKLEELD-DAERLLIRKVQMIE--FHEELEKIRTSAKRS-RFAALRAYLE 1042
>SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1)
Length = 298
Score = 27.9 bits (59), Expect = 2.8
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 78 VRRAAQLAVSVFYRGKEKLSDVDPQKVNKFIEFLKRFSANLKEGVQDAKKQLKK 131
+RRA A ++ + SD + V KFI KR S + + Q AK+ K
Sbjct: 167 IRRARFRATTISQVVQSFRSDEERNSVRKFIAHYKRCSVRVSQHFQSAKQMCYK 220
>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 2 ENNTDHSEQTNYSPLTVEDVDVDFLP--IVYDIIRSVERDFHDNASKIRESHECSHRVLE 59
E D + NY P+T+ L + + S + + N+S R+ + C ++
Sbjct: 428 EKKDDKLSKENYRPVTILSCVNKVLEKLVSVQLATSFDSLMYVNSSAYRKQYSCETTLIN 487
Query: 60 LQKRLEIAKAQKIA 73
L +R ++A+ ++++
Sbjct: 488 LTERWKMARDERLS 501
>SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25)
Length = 389
Score = 27.1 bits (57), Expect = 5.0
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 52 ECSHRVLELQ---KRLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKLSDVDPQKVNKFI 108
EC+HRVL L +RL IA ++ Y V R + ++ G +S + V+++I
Sbjct: 155 ECTHRVLNLSDSCERLAIASRRRYLVGYIV-RVTRKRITYQSIGFHTISTWTIRGVSRWI 213
Query: 109 EFLKR 113
+L R
Sbjct: 214 SYLTR 218
>SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 734
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 7 HSEQTNYSPLTVEDVDVDFLPIVYDIIRSVER 38
H + TN+S +V D +D LP++ DI S ++
Sbjct: 621 HFQVTNWSDHSVPDKPLDLLPLLNDIQTSQQK 652
>SB_14121| Best HMM Match : HTH_8 (HMM E-Value=6.2)
Length = 130
Score = 27.1 bits (57), Expect = 5.0
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 33 IRSVERDFHDNA--SKIRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLA 85
IR++ER FHD A SK+ + E + L+ KRL + ++++E+Y R LA
Sbjct: 46 IRTIER-FHDVARVSKMIDWRELI-KDLQTAKRLTWEERERLSENYDEERRISLA 98
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 67 AKAQKIAESYPVRRAAQLAVSVFY 90
AKA++++ S+P+R L SVFY
Sbjct: 163 AKAEELSPSHPIRLGLALNFSVFY 186
>SB_7153| Best HMM Match : 6PF2K (HMM E-Value=1.9e-25)
Length = 301
Score = 26.6 bits (56), Expect = 6.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 10 QTNYSPLTVEDVDVDFLPIV 29
Q Y PLT+ED D+ F+ I+
Sbjct: 152 QAAYEPLTMEDGDLSFIKII 171
>SB_38146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 26.6 bits (56), Expect = 6.6
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 30 YDIIRSVERDFHDNASKI-RESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVSV 88
++ +R V R DN++++ R SHE + + +++ + + KIA + + L
Sbjct: 29 FNSVREV-RHLQDNSTRLARMSHEATEELARQAEKMSLLQVAKIALMFCI-----LWFLA 82
Query: 89 FYRGKEKLSDVDPQKVN 105
+ +E L+D P VN
Sbjct: 83 TWSYQEALNDTSPAAVN 99
>SB_2860| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 417
Score = 26.6 bits (56), Expect = 6.6
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 48 RESHECSHRV-LELQK--RLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKLSDVDPQKV 104
R +C+H+V +E K LE K + + + Y + Q + F KE+ K+
Sbjct: 175 RMKEDCAHQVEMERSKVRDLEQQKQRLVEQLYAAEKRYQDKENEFMTHKERELSKPEVKL 234
Query: 105 NKFIEFLKRFSANLKEGVQDAKK 127
++FL+ A L+ ++ + K
Sbjct: 235 QSELDFLRVEKAELERKLESSNK 257
>SB_45224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 10 QTNYSPLTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHEC 53
Q PL VED+DVD L D+I+ S IR + C
Sbjct: 9 QLGLDPLVVEDLDVDVL-AGSDVIQYYPDSGASAQSSIRRAQSC 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,005,333
Number of Sequences: 59808
Number of extensions: 134875
Number of successful extensions: 505
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 495
Number of HSP's gapped (non-prelim): 21
length of query: 131
length of database: 16,821,457
effective HSP length: 75
effective length of query: 56
effective length of database: 12,335,857
effective search space: 690807992
effective search space used: 690807992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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