Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002809-TA|BGIBMGA002809-PA|undefined
(131 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 1.4
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 28 1.9
AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical ... 28 1.9
AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical ... 27 3.3
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z66513-15|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 27 4.3
AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Hypothetical ... 27 4.3
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 27 5.7
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 27 5.7
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 26 7.5
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 26 7.5
U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical p... 26 7.5
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 30 YDIIRSVERDFHDNASK--IRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVS 87
YDI + VE+ D+ K + E + + L ++K + +KI E + A+
Sbjct: 366 YDINKDVEKKVQDHHRKYLLNEQLKVIKKELGIEKDEKTTIIEKIDERIKTLAVPEYALK 425
Query: 88 VFYRGKEKLSDVDP 101
V K KL +DP
Sbjct: 426 VINEEKTKLQFLDP 439
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 37 ERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKL 96
ER N +I +C +EL ++L + E V+R + A S R +EKL
Sbjct: 245 ERYESTNEIEINRLKKCVEEEIELNRQLIAENTRLATEQVSVKRNMEAARSELQRSEEKL 304
Query: 97 SD 98
++
Sbjct: 305 NN 306
>AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical
protein T12F5.2 protein.
Length = 329
Score = 28.3 bits (60), Expect = 1.9
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 2 ENNTDHSEQTNYSPLTVEDVDVDFLPIVYDIIRS-VERDFHDNASKIRESHECSHRVLEL 60
++NT H Y P+ + + + D++++ V +DF D + + S +L
Sbjct: 98 DHNTTHHTVIEYLPIRL-NYQLRMNTKSADVLKTRVHKDFSDAMTILS-----SLPILVK 151
Query: 61 QKRLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKLSDVDPQKVNKFIEFLKRFSANLKE 120
+K E+AK IAE + + +F K + + + + K +E LKR LK+
Sbjct: 152 KKECEVAK---IAEFMTRAKNTESLTQIF-----KTFEREMKNIIKILEALKRDGGKLKD 203
Query: 121 GVQDAKKQLK 130
V+ K+L+
Sbjct: 204 TVEQTVKRLE 213
>AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical
protein T08D2.5 protein.
Length = 325
Score = 27.5 bits (58), Expect = 3.3
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 2 ENNTDHSEQTNYSPLTVEDVDVDFLPIVYDIIRS-VERDFHDNASKIRESHECSHRVLEL 60
++NT H Y P+ + + + D++++ V +DF D + + S +L
Sbjct: 48 DHNTTHHTVIEYLPIRL-NYQLRMNTKSADVLKTRVHKDFSDAMTILS-----SLPILVK 101
Query: 61 QKRLEIAKAQKIAESYPVRRAAQLAVSVFYRGKEKLSDVDPQKVNKFIEFLKRFSANLKE 120
+K E+AK IAE + + +F K + + + + K +E LKR LK+
Sbjct: 102 KKECEVAK---IAEFMTRVKNTESLTQIF-----KTFEREMKNIIKILEALKRDGGKLKD 153
Query: 121 GVQDAKKQLK 130
V+ K+L+
Sbjct: 154 TVEQTVKRLE 163
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 29 VYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLE--IAKAQKI 72
V DI+++V D A I+E E H + E+QK +K+QK+
Sbjct: 763 VKDILKNVADITADMAPVIQERKEAEHTLAEIQKETRDFASKSQKL 808
>Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 16 LTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKI 72
+ + DVD + L I + ++S + D + A+ I+E HE + + L+ + +A+ +K+
Sbjct: 636 MRISDVDHNSLVIETERLQSEKNDLKEKAAVIKE-HETTSKEALLKIEIVLAEFEKL 691
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 16 LTVEDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKI 72
+ + DVD + L I + ++S + D + A+ I+E HE + + L+ + +A+ +K+
Sbjct: 636 MRISDVDHNSLVIETERLQSEKNDLKEKAAVIKE-HETTSKEALLKIEIVLAEFEKL 691
>Z66513-15|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 29 VYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLE--IAKAQKI 72
V DI+++V D A I+E E H + E+QK +K+QK+
Sbjct: 763 VKDILKNVADITADMAPVIQERKEAEHTLAEIQKETRDFASKSQKL 808
>AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Hypothetical
protein Y41D4B.12a protein.
Length = 244
Score = 27.1 bits (57), Expect = 4.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 53 CSHRVLEL--QKRLEIAKAQKIAESYPVRRAAQLAVSVF 89
C +RV++ QK+LEI ++A+ + VR Q+A F
Sbjct: 78 CRNRVVQCGPQKKLEIFSTCEMAKGFGVRAGEQIAAGEF 116
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 26.6 bits (56), Expect = 5.7
Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 37 ERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKIAESYPVRRAAQLAVSV--FYRG-K 93
++ ++ SK+ ++ + LE +K+ E A+A+K + + +++ V F K
Sbjct: 62 QKKLNETLSKVSDAVKQRADELEKEKQ-EKAEAKKKEAEAAIEKWKEVSQQVGEFVESVK 120
Query: 94 EKLSDVDPQKVNKFIEFLKRFSANLKEGVQDAKKQ 128
EK + +K K +F+K F+ +K+ ++ + Q
Sbjct: 121 EKKQAKEQEKQQKIDDFVKTFTDKIKQKQEEKEAQ 155
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 26.6 bits (56), Expect = 5.7
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 19 EDVDVDFLPIVYDIIRSVERDFHDNASKIRESHECSHRVLELQKRLEIAKAQKIAESYPV 78
E++D D+ I R E++ + +KI+E+ + + + +E K QK AE +
Sbjct: 127 EEIDADYKIIEDAEKRKKEQEKREIENKIKEARKKREQEARRLEEVEKLKEQKKAEKRKM 186
Query: 79 RRAAQLAVSVFYRGKEKLSDVDPQKVNKFIEFLKRFSANLKEGVQDAKKQLKK 131
+ A + ++++S+ K+ K E A K +D +K+ K
Sbjct: 187 KEALEKEEEEESFDEDEVSE-KRAKIEKSTEKGGSEKATTKLSKKDRRKETLK 238
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 IRSVERDFHDNASKIRESHECSHRVLELQKRLEIAK 68
I +ER+ DN K+R + +V EL L ++K
Sbjct: 483 ISDLERELKDNKDKLRHGADSDAKVNELAVELRMSK 518
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 33 IRSVERDFHDNASKIRESHECSHRVLELQKRLEIAK 68
I +ER+ DN K+R + +V EL L ++K
Sbjct: 483 ISDLERELKDNKDKLRHGADSDAKVNELAVELRMSK 518
>U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical
protein C42D4.1 protein.
Length = 251
Score = 26.2 bits (55), Expect = 7.5
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 81 AAQLAVS-VFYRGKEKLSDVDPQKVNKFIEFLKRFSANLKEGVQDAK 126
A+ LAV V E+ S+V K K ++F KR LKE QDAK
Sbjct: 8 ASLLAVGLVLAEDSEEKSEVKDVKPWKKLDFKKREPEFLKEMSQDAK 54
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.131 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,034,748
Number of Sequences: 27539
Number of extensions: 109683
Number of successful extensions: 406
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 402
Number of HSP's gapped (non-prelim): 14
length of query: 131
length of database: 12,573,161
effective HSP length: 74
effective length of query: 57
effective length of database: 10,535,275
effective search space: 600510675
effective search space used: 600510675
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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