GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002808-TA|BGIBMGA002808-PA|IPR012089|PP-loop ATPase,
YdaO-related, IPR000719|Protein kinase, IPR000541|Protein of unknown
function UPF0021, IPR011063|PP-loop
         (338 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   5.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   7.3  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   7.3  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   7.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.7  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/28 (32%), Positives = 20/28 (71%), Gaps = 1/28 (3%)

Query: 99  SLETVKQNRDDYEMPLKILSYKDLYGWT 126
           +L TV + ++ Y+M + I ++ D++GW+
Sbjct: 255 TLTTVVE-KECYKMKVTIDAFNDIFGWS 281


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/28 (32%), Positives = 20/28 (71%), Gaps = 1/28 (3%)

Query: 99  SLETVKQNRDDYEMPLKILSYKDLYGWT 126
           +L TV + ++ Y+M + I ++ D++GW+
Sbjct: 181 TLTTVVE-KECYKMKVTIDAFNDIFGWS 207


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 5/16 (31%), Positives = 11/16 (68%)

Query: 24  ICKECFFWAFETEIHY 39
           +   CFFW++++ + Y
Sbjct: 119 VASNCFFWSYQSYMSY 134


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 5/16 (31%), Positives = 11/16 (68%)

Query: 24  ICKECFFWAFETEIHY 39
           +   CFFW++++ + Y
Sbjct: 119 VASNCFFWSYQSYMSY 134


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 284 VEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTC 327
           VE   E  +T    +S     Q +  +E+SD +   +++E ++C
Sbjct: 430 VESEEEDEETSTTVFSNVEVVQEEAKKEESDSNNNNNKEEGNSC 473


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 302 NNSQVKLDEEDSDDSEIKHQDEDDTCSS 329
           N+   K+D+E+ +  +    D+DD  +S
Sbjct: 273 NHKYEKIDKEEHESMDDDDDDDDDMSNS 300


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
          peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 22 DAICKECFFWAFETEIH 38
          D+IC++C+    E ++H
Sbjct: 66 DSICEDCYMLFREPQLH 82


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
          peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 22 DAICKECFFWAFETEIH 38
          D+IC++C+    E ++H
Sbjct: 66 DSICEDCYMLFREPQLH 82


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
          peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 22 DAICKECFFWAFETEIH 38
          D+IC++C+    E ++H
Sbjct: 66 DSICEDCYMLFREPQLH 82


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 281 ERNVEKNNEKLQTVLDKYSLENNSQVK 307
           E N+EK+N      L KY  +N  + K
Sbjct: 317 ETNLEKSNLNHNEQLRKYLCKNEDETK 343


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 281 ERNVEKNNEKLQTVLDKYSLENNSQVK 307
           E N+EK+N      L KY  +N  + K
Sbjct: 209 ETNLEKSNLNHNEQLRKYLCKNEDETK 235


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 215 LGIGKSSKVKKLLDEYNTRQNNLE 238
           +G+G  S++K L    +  Q NL+
Sbjct: 57  VGLGDDSRIKHLEPNLDVNQGNLK 80


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 259 KNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTV 294
           K ++NGF     +  N      E N    N+KL  V
Sbjct: 66  KQVNNGFANLRQHIPNFIAAAFESNSRGGNKKLSKV 101


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.133    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,386
Number of Sequences: 317
Number of extensions: 3345
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 338
length of database: 114,650
effective HSP length: 57
effective length of query: 281
effective length of database: 96,581
effective search space: 27139261
effective search space used: 27139261
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)