Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002808-TA|BGIBMGA002808-PA|IPR012089|PP-loop ATPase,
YdaO-related, IPR000719|Protein kinase, IPR000541|Protein of unknown
function UPF0021, IPR011063|PP-loop
(338 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr ... 274 9e-75
SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|ch... 43 7e-05
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.033
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.058
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.13
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 31 0.18
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.23
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 31 0.31
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 30 0.54
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 30 0.54
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 29 0.71
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 29 0.71
SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyce... 29 0.94
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.94
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 29 0.94
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.94
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 29 1.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 28 1.6
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 28 2.2
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 28 2.2
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 2.2
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 27 2.9
SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|c... 27 2.9
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.9
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 2.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 3.8
SPAC4G9.13c |vps26|pep8|retromer complex subunit Vps26|Schizosac... 27 3.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.0
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 27 5.0
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.7
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 26 6.7
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 26 6.7
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 26 6.7
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces... 26 6.7
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 8.8
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 8.8
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 26 8.8
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 8.8
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc... 26 8.8
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 26 8.8
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 8.8
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 8.8
>SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 335
Score = 274 bits (673), Expect = 9e-75
Identities = 124/184 (67%), Positives = 151/184 (82%), Gaps = 1/184 (0%)
Query: 15 LKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLN 74
L RPKTG ICKECF++ FETEIH I + KLF +G+ V + ASGGKDSTVLA+ +K LN
Sbjct: 16 LVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKDSTVLAYVMKLLN 75
Query: 75 ERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLY-GWTMDEIVAQ 133
ERY+YGL L L+S+DEGI GYRDDSL+TVK+N+ Y +P+KI+SY DLY GWTMD +VA+
Sbjct: 76 ERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVVAR 135
Query: 134 IGRKNNCTFCGVFRRQALDRGAAMLNVKCIATGHNADDIAETVLMNVLRGDIARLKRCTA 193
IG KNNCT+CGVFRRQALDR A L++ + TGHNADDIAET+LMN+LRGD+ARL R T
Sbjct: 136 IGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLLRGDVARLPRSTE 195
Query: 194 ITTE 197
ITT+
Sbjct: 196 ITTQ 199
Score = 49.2 bits (112), Expect = 8e-07
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 189 KRCTAITTE-VCKACVLLEGLNKGLPKLGIGKSSKVKKL 226
+RC I++ +CKAC+LLEGLNKG+ LG+G K KKL
Sbjct: 288 ERCGFISSNRICKACMLLEGLNKGITGLGLGSDRKTKKL 326
>SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 42.7 bits (96), Expect = 7e-05
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 53 VAVAASGGKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEM 112
+ +A SGG DS +L+ +K + + + +D I R +S E Q +
Sbjct: 25 LGIAVSGGVDSMLLSWFMKESQIMFGWPNQFIAFVVDHRI---RKNSTEEALQTIWNLNR 81
Query: 113 PLKILSYKDLYGWTMDEIVAQIGRKNNCTFCGVFRRQALDRGAAMLNVKCIATGHNADDI 172
L Y ++ W D++ + + T R Q L R N++ I T H+A+D
Sbjct: 82 MLIPNVYLNI-NWGNDDVHSLTNLE---TIAREHRYQVLTRACITHNIRHICTAHHANDQ 137
Query: 173 AETVLMNVLR 182
AET+ M +LR
Sbjct: 138 AETIFMRLLR 147
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.033
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 221 SKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKT 280
++++K E + Q+ L + E+ + +T+K+ ++ +N K E N K
Sbjct: 1032 TEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQKLLDEKD 1091
Query: 281 ERNVEKNNEKLQTVLDKYSLENNSQVK 307
+RNVE E+L + K E N+Q+K
Sbjct: 1092 QRNVEL--EELTSKYGKLG-EENAQIK 1115
Score = 31.5 bits (68), Expect = 0.18
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 191 CTAITTEVCKACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNIT 250
C A ++ K+ + L+ + L + KKL + + +NN +T K L+D T
Sbjct: 583 CNAFQEKLAKSVMQLKENEQNFSSL----DTSFKKLNESHQELENNHQTITKQLKD---T 635
Query: 251 DKKTSKTCKNISNGFKQKE---CNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQ-V 306
K + +N F+QKE + N K + E N ++ D SLE N Q +
Sbjct: 636 SSKLQQLQLERAN-FEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTL 694
Query: 307 KLDEEDSDDS 316
K D S+++
Sbjct: 695 KEDLRKSEEA 704
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.058
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 217 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCC 276
I SKV L+ + ++TA L++ D K KN+ + QKE
Sbjct: 4 ISMKSKVCPLIYHFLQENGYVKTAQTFLKETGDKDLAKGKVKKNLLDLLSQKEFLPYLTT 63
Query: 277 TN-----KTERNVEKNNEKLQTVLDK---------YSLENNSQVKLDEEDSDDSEIKHQD 322
+ KT+ ++EK+N+ Q + K S + S DE DS SE +
Sbjct: 64 EDVGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSS 123
Query: 323 EDDTCSSS 330
ED+ SSS
Sbjct: 124 EDNDSSSS 131
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 250 TDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLD 309
++ ++S + S+ E +++ + + + + +E D S ++S+ +
Sbjct: 207 SESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS 266
Query: 310 EEDSDDSEIKHQDEDDTCSSS 330
+DSD S EDD+ S S
Sbjct: 267 SKDSDSSSNSSDSEDDSSSDS 287
Score = 25.8 bits (54), Expect = 8.8
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 229 EYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTE-RNVEKN 287
E ++ N+ ++ D E + ++ S + + S E + ++ ++ +E + ++
Sbjct: 120 ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSED 179
Query: 288 NEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSS 330
N+ + D S E++S+ S DSE + E SSS
Sbjct: 180 NDSSSSSSDSES-ESSSEDSDSSSSSSDSESESSSEGSDSSSS 221
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 249 ITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEK----LQTVLDKYSLENNS 304
I +KK S + + + + E +++ + + E VEK EK ++ D S ++S
Sbjct: 156 IEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSS 215
Query: 305 QVKLDEEDSDDSEIKHQDEDD 325
D + S DSE + ED+
Sbjct: 216 SESGDSDSSSDSESESSSEDE 236
Score = 25.8 bits (54), Expect = 8.8
Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 234 QNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQ--KECNATNCCTNKTERNVEKNNEKL 291
+ +++ +VK+ +K SK+ K K+ K+ + T+ K+++ ++ +
Sbjct: 6 KTSVKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPE 65
Query: 292 QTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSS 330
+ K S++ + K EE S +SE + + SSS
Sbjct: 66 PS---KKSVKKQKKSKKKEESSSESESESSSSESESSSS 101
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 280 TERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDT 326
++ +V+ +N+ + + + E+NSQ +D +S+ S+ + ED+T
Sbjct: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDET 167
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 31.1 bits (67), Expect = 0.23
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 225 KLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNV 284
KLL++ +T + +LE VK + D NI K S + + E +T +K +++V
Sbjct: 178 KLLEDASTIEKSLEKEVKTIYDSNIASPKESSDAIDADHAMID-ESRSTQRRKSKPKKHV 236
Query: 285 EKNNEKLQTVLDK------YSLENNSQVKLDEEDSDDS 316
+E DK ++ + Q KLD D + S
Sbjct: 237 AFTDEYQVAFSDKPGKYFNQPMQYSKQFKLDNPDYEAS 274
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 278 NKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSSCGR 333
N+ E + NN+K + D EN + +EE+ +D E +DE+D S GR
Sbjct: 81 NENEVDNVNNNDKKEDE-DNVE-ENEEEADANEEEEEDEEDDEEDEEDEDESGGGR 134
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 263 NGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDS 316
+G + + N N + E NVE+N E+ ++ E+ + DEED D+S
Sbjct: 79 DGNENEVDNVNNNDKKEDEDNVEENEEEADA--NEEEEEDEEDDEEDEEDEDES 130
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 297 KYSLENNSQVKLDEED-SDDSEIKHQDEDDTCS 328
KY+L++ QV ++ ED +DS QDEDD S
Sbjct: 64 KYALDDLPQVDVENEDEEEDSITSFQDEDDETS 96
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 29.9 bits (64), Expect = 0.54
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 24 ICKECFFWAFETEIHYTITK-GKLFNKGDSVAVAASGGKDSTVLAHTLK-TLNERYN 78
IC W+ E + I + K+ D V A SGG DSTV + LK + +R++
Sbjct: 209 ICHAKPNWSMENFVDKEILRIRKMIGPSDHVIGAVSGGVDSTVASKVLKEAIGDRFH 265
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 295 LDKYS-LENNSQVKLDEEDSDDSEIKHQDE 323
L+KYS +E NS++ DEE+ D+S I Q+E
Sbjct: 53 LEKYSKIELNSEIWEDEEEEDNSGIVSQNE 82
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 67 AHTLKTLNERYNYGLNLMLLSIDE 90
A T+K L E++N G++ LLS DE
Sbjct: 1111 ASTIKHLKEQFNEGVDYDLLSSDE 1134
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 29.5 bits (63), Expect = 0.71
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 213 PKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCK-NISNGFKQKECN 271
PKL + V+ + E + + E A +LE+ ++K ++ K ++S+ F +E
Sbjct: 756 PKLQSKNNQTVEAVNTETSDKLQEKE-ANHELENIEKIEEKLTEVDKVSLSDAFPDQEIK 814
Query: 272 ATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDS 316
+ R+V KN + +T +DK ++N S K D E S S
Sbjct: 815 NSRTSVQNGTRSVSKNTPEKETKVDK--IDNVS--KKDVETSPGS 855
>SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 104
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 287 NNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSSCGR 333
+NE + K + Q K DE SD D D +CSS C R
Sbjct: 54 DNEHMNKKKSKVCCIFHKQRKFDESSSDSDS--DSDSDSSCSSCCSR 98
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.1 bits (62), Expect = 0.94
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 205 LEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNG 264
L+ +N L + K+SKV+ LL E N + L KDL D T + +N +
Sbjct: 913 LKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLD---TKGELESLRENNATV 969
Query: 265 FKQKECNATNCCTNKTERNVEKNNE--KLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQ 321
+K C + E V K+ E KL + Y E +++L + ++ I+ +
Sbjct: 970 LSEK-AEFNEQCKSLQETIVTKDAELDKLTKYISDYKTE-IQEMRLTNQKMNEKSIQQE 1026
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 29.1 bits (62), Expect = 0.94
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 241 VKDLEDCNITDKKTSKTCKNISNGF-----KQKECNATNCCTNKTERNVEKNNEKLQTVL 295
V D ED + D T+ + +N S + K + N+ + NK +++E+NN V
Sbjct: 350 VDDEEDDDFLDVTTATSLQNKSTDYGSVKRKTENLNSDSDIQNKRTKSIEENNSLPPIVS 409
Query: 296 DKYSLENNSQVKLDEEDSDDSEIKHQDEDD 325
+ +++++ +++ + DEDD
Sbjct: 410 TNGITDGDTEMQESKKNVIINGFNEDDEDD 439
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 0.94
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 197 EVCKACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTS- 255
E+ K C LE + L + + + N+ +E K++E N + + +
Sbjct: 1356 ELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAA 1415
Query: 256 ---KTCKNISNGFKQKECNATNCCTNKTERNVEKN--NEKLQTVLDKYSLENNSQVKLDE 310
+ C+N+ + + TNK + KN NE +Q ++ SL++++ +L E
Sbjct: 1416 AWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIE--SLKDSNH-QLQE 1472
Query: 311 EDSDDSE 317
S D+E
Sbjct: 1473 SASSDAE 1479
Score = 25.8 bits (54), Expect = 8.8
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 217 IGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTS-KTCKNISNGFK---QKECNA 272
+GK +++K +++ N N L+T + +L+ I K S K ++ +K Q N
Sbjct: 1287 LGKIQELEKEVEKLNASLNPLQTEINELK-AEIGAKTASLNLMKEYNSRWKLRFQSVLNK 1345
Query: 273 TNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDED 324
++KN E L+ +K LE Q E D+ ++ +E+
Sbjct: 1346 YERVDPTQLEELKKNCEALEK--EKQELETKLQETAKETDTFKQQVNSLNEE 1395
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 248 NITDKKT--SKTCKNISNGFKQKECNATNCCTNKTERNV-EKNNEKLQTVLDKYSLENNS 304
N+ KKT SK+ K S K ++ N N RNV E+++ + Q + YS +S
Sbjct: 1125 NLKQKKTHSSKSDKKSSRRRKNEKRRKLNE-QNPNIRNVPERSSSRFQGIRINYSEAPSS 1183
Query: 305 QVKLDEEDSDDSEIKHQDEDD 325
++ EE+ + SE + +D
Sbjct: 1184 SEEISEEEEEISEEDFDEIED 1204
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 234 QNNLETAVKDLEDCNITDKKTSKTCKNISNGF-KQKECN-ATNCCTNKTERNVEKNNE 289
+N +T +K+LED + K+ KN+ N KQ+ N N +++ +VE N++
Sbjct: 639 KNENQTLLKNLEDSTARYEHLQKSFKNVFNQLRKQQPSNHGRNSSVSRSSSSVEVNSK 696
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 231 NTRQNNLETAVKDLEDCNITDKKTSKTCKNISNG--FKQKECNATNCCTNKTERNVEKNN 288
N+RQ +L T VK NIT TC + N F KE ++++ + +E N
Sbjct: 623 NSRQIDLSTFVKQANTPNIT-SLLDGTCSSPPNNECFNDKEPDSSSSTLISDRQELEYRN 681
Query: 289 EKLQTV 294
+TV
Sbjct: 682 PNAETV 687
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 27.9 bits (59), Expect = 2.2
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 228 DEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKN 287
DE+ T + +ET V+ L +C + K S+ ++ K+ + + +E + ++
Sbjct: 74 DEFPTPKQIMETDVETLHECGFS-KLKSQEIHIVAEAALNKQIPSKSEIEKMSEEELMES 132
Query: 288 NEKLQTVLDKYSLENNSQV---KLDEEDSDDSEIKHQDED 324
K++ V ++++E S +LD +DDS +K++ ++
Sbjct: 133 LSKIKGV-KRWTIEMYSIFTLGRLDIMPADDSTLKNEAKE 171
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 219 KSSKVKKLLDEYNTRQNNLETAV--KDLEDCNI 249
KSS+V LL YNT +LE A+ KD E N+
Sbjct: 579 KSSEVSNLLSRYNTEVAHLEDALHSKDRELANL 611
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 27.5 bits (58), Expect = 2.9
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 218 GKSSKVKKLLDEYNTRQNNLETAV------KDLEDCNITDKKTSKTCKNISNGFKQKECN 271
GK+ ++ LL+EY + +E+ V D K+ + K I +G ++E
Sbjct: 175 GKTEEISLLLEEYPDLRKQMESLVPSEVSYDDFWKRFFWHKEVVQPIKAIQSGNDEEEIF 234
Query: 272 ATNCCTNKTER--NVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSE 317
+ + E N + N+EK Q+ ++ + ENNS ++ +E +D E
Sbjct: 235 SWGDERSDEEESDNEQVNDEKKQS-SEEDTTENNSAAEVIDETVNDLE 281
>SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 27.5 bits (58), Expect = 2.9
Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
Query: 13 AVLKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLAHTL-K 71
A+++ PK C+ C W + ++ T+ ++ ++V AS +
Sbjct: 17 AIIEEPKLSCCHCETCRIWCSSPFMAFSCTQKPSVSENENVGKYASSSFAERIFCKNCGT 76
Query: 72 TLNERYNYGLNLMLLS--IDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLYGWTMDE 129
TL Y G N ++ + +GI D+ + D Y+ K + T+DE
Sbjct: 77 TLYFAYTNGKNPYFINAWLFKGIENITFDAQVCIDDKPDCYDFANKTSMF------TVDE 130
Query: 130 IVAQI 134
++ I
Sbjct: 131 VMKSI 135
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 293 TVLDKYSLENNSQVKLDEEDSDDSEIKHQDED 324
T+ D+Y NN + K E + +++K+QDED
Sbjct: 253 TLTDQYLFPNNVETKRFIEKALTNKVKNQDED 284
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.5 bits (58), Expect = 2.9
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 253 KTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEED 312
K SKT +N+S+ F +K N ++ K+ E++ T +K+ E S++ L+EE+
Sbjct: 688 KHSKTIENVSSNFSKKNRNVV------VSESLTKSMEEVLTP-EKF-YERLSKL-LEEEN 738
Query: 313 SDDSEIKH 320
SD E+K+
Sbjct: 739 SDLGELKN 746
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 3.8
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 200 KACVLLEGLNKGLPKLGIGKSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCK 259
K L E +N G KL + K+ L + T K+L+ T K + + K
Sbjct: 863 KCSNLQEKINFG-NKLAKEHTEKISSLEKDLEAATKTASTLSKELK----TVKSENDSLK 917
Query: 260 NISNGFKQKECNATNCCTNKTERNVEKNNEKL 291
++SN + KE + N + + + + NEKL
Sbjct: 918 SVSNDDQNKEKSVNNEKFKEVSQALAEANEKL 949
Score = 26.2 bits (55), Expect = 6.7
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 225 KLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNV 284
KL E+ + ++LE KDLE T SK K + + + + +N NK E++V
Sbjct: 876 KLAKEHTEKISSLE---KDLEAATKTASTLSKELKTVKSENDSLK-SVSNDDQNK-EKSV 930
Query: 285 EKNNEKLQTVLDKYSLENNSQVKLDEE 311
NNEK + V + N DEE
Sbjct: 931 --NNEKFKEVSQALAEANEKLNARDEE 955
>SPAC4G9.13c |vps26|pep8|retromer complex subunit
Vps26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 34 ETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGIT 93
ET + I G N+G+++ + + L T + +N++++ L L+ +DE
Sbjct: 224 ETITRFQIMDGNP-NRGETIPLRMF--LNGYALTPTFRDVNKKFSVRYYLSLILVDEDQR 280
Query: 94 GYRDDSLETVKQNRDDYE 111
Y S T+ + RD++E
Sbjct: 281 RYFKQSEITLWRRRDEHE 298
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 88 IDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDL 122
++ GY DD + K N +P +SYKDL
Sbjct: 662 VEAEFLGYSDDKIHLHKTNGVKISVPSAKMSYKDL 696
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 26.6 bits (56), Expect = 5.0
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 243 DLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVE------KNNEKLQTVLD 296
D++ NI K+ S T ++ G++ E K R N ++L L
Sbjct: 16 DIDAANIPLKRISYTDPFLAEGYRIHETIVNLLVFLKKIRGAYLKDRTFSNVQRLSKPLM 75
Query: 297 KYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSSC 331
+ SLE S+++LDE D EI+H E + SSC
Sbjct: 76 ECSLEELSKLELDEVQRD--EIEH--EVSSAISSC 106
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 286 KNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIK 319
KN++ L+ L+K E N Q ++D DDS+ +
Sbjct: 104 KNHDNLKRKLNKVGDELNEQQSDTDDDDDDSKAR 137
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 67 AHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLYGWT 126
A LK +RY ++ LL IDE + ++LE + R D +M +I + L GW
Sbjct: 20 AEDLKIFIKRYERSVDSTLLEIDEN----KREALEKYIEER-DRKMKYEIECNERLQGWK 74
Query: 127 MDEIVAQIGRKNN 139
I +I + +
Sbjct: 75 KLAIEREISEEQS 87
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 236 NLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEK-NNEKLQTV 294
NL ++++D + D+ + N K+ + N++ +E +EK T+
Sbjct: 293 NLNELEQEVQDLDPIDEGFEEKVPRFRNPSKKAFYEKLHSLRNRSYSKLESLTSEKSDTL 352
Query: 295 LDKYSLENNSQVKLDEEDSDDSEI 318
+ K L N S+ D +D+E+
Sbjct: 353 ITKSELANESEEDDFIVDDEDTEV 376
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 67 AHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSYKDLYGWT 126
A LK +RY ++ LL IDE + ++LE + R D +M +I + L GW
Sbjct: 20 AEDLKIFIKRYERSVDSTLLEIDEN----KREALEKYIEER-DRKMKYEIECNERLQGWK 74
Query: 127 MDEIVAQIGRKNN 139
I +I + +
Sbjct: 75 KLAIEREISEEQS 87
>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 366
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 9 CGNNAVLKRPKTGDAICKECFFWAFETEI--HYTITKGKL-FNKGDSVAVAASGGKDSTV 65
C N A + DA+C CF E +I + + + L K +A SGG S
Sbjct: 17 CDNKATVLTKS--DAVCDSCFVRRIENKIRRQFELVRPNLQGRKSKRAMLAISGGISSMA 74
Query: 66 LAHTLKTLNE 75
+ T L++
Sbjct: 75 MLETANYLSK 84
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 279 KTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSS 330
KT +E+N ++QT +D S D+ S +S + Q E C +S
Sbjct: 759 KTAATIEQNEHEIQTSVDPISNVKAILPNADDVSSKNSSTEDQLECLRCGNS 810
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 262 SNGFKQ-KECNATNCCTNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSE 317
S G K KE N++NC +K E + + +K + DK ++ + + E SDDS+
Sbjct: 133 SAGIKPYKENNSSNCAISK-EAGLRRLIDKDRESFDKNLNQSFTNLTFPEPISDDSD 188
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 25.8 bits (54), Expect = 8.8
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 230 YNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNAT-NCCTNKTERN---VE 285
Y + +N + A D K SKT GF K+ NA N T+ + N +E
Sbjct: 195 YESPISNSQAASLSDSDMVQQIKNGSKTSL-FKKGFLFKKNNAMQNRTTSNIKSNASAIE 253
Query: 286 KNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKH 320
KN E + L+ +L N E D ++H
Sbjct: 254 KNKETILNALNNSTLNENGHQDTQNEVLRDIVLEH 288
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 238 ETAVKDLEDCNITDKKTSKTCKNISNGF 265
E + E C+++D TSKT +I N F
Sbjct: 3 EELFSNSETCSLSDPLTSKTLSSIENPF 30
>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 306 VKLDEEDSDDSEIKHQDEDDTCSSSCGRLG 335
+K+ E+DS E +E D C S C +G
Sbjct: 288 LKMLEKDSKKDEKTKFEESDICISQCSSMG 317
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 235 NNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKEC 270
+N+E K +D N KT + ++++ FK+ C
Sbjct: 33 SNMEKEAKHEDDANTLQPKTEEEIESLAKLFKKPSC 68
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 277 TNKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDT 326
+++ ER+ EK + K + EN++ + D+ D DD + D D+T
Sbjct: 1463 SHRPERSSEKKSPSPVFTSVKQTAENDADNEDDKTDMDDQTEETLDADNT 1512
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 285 EKNNEKLQTVLDKYSLENNSQVKLDEED 312
E+N + LQT +D L++NS +L E D
Sbjct: 404 EQNIKSLQTDIDNLCLQSNSLKQLSEVD 431
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,587,883
Number of Sequences: 5004
Number of extensions: 68443
Number of successful extensions: 384
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 329
Number of HSP's gapped (non-prelim): 67
length of query: 338
length of database: 2,362,478
effective HSP length: 73
effective length of query: 265
effective length of database: 1,997,186
effective search space: 529254290
effective search space used: 529254290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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