Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002808-TA|BGIBMGA002808-PA|IPR012089|PP-loop ATPase,
YdaO-related, IPR000719|Protein kinase, IPR000541|Protein of unknown
function UPF0021, IPR011063|PP-loop
(338 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 28 0.43
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 27 0.57
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 26 1.3
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 26 1.7
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 2.3
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 25 4.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 4.0
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 24 5.3
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 24 5.3
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 24 5.3
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 24 5.3
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 7.0
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 7.0
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 7.0
AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14... 24 7.0
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 27.9 bits (59), Expect = 0.43
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 278 NKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSSCGRLGV 336
N+ +R +E +L + K S + D + D E + EDD + C R+GV
Sbjct: 740 NEYDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQDIKESMNNVEDDVYAEFCARIGV 798
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 27.5 bits (58), Expect = 0.57
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 296 DKYSLENNSQVKLDEEDSDDSEIKHQDEDDTCSSSCGRLG 335
+ Y E + + + DE + DD+E +DEDD ++ G LG
Sbjct: 476 EDYEGEEDEEDEEDEYEGDDTEEDEEDEDDELAA--GPLG 513
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.2 bits (55), Expect = 1.3
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 301 ENNSQVKLDEEDSDDSEIKHQDEDD 325
E + + DEE++D+SE + +E D
Sbjct: 83 EQEEEAEADEEEADESESEESEESD 107
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 25.8 bits (54), Expect = 1.7
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 219 KSSKVKKLLDEYNTRQNNLETAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTN 278
K K+ K E +Q N K + + KK +T K Q+ + N
Sbjct: 245 KDLKLAKKCTEEKEQQYN---QFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEE 301
Query: 279 KTERNVEKNNEKLQTVLDKYSLENNSQVKLDE 310
KTER + +++ + ++D + + + +LDE
Sbjct: 302 KTERLEDTISKQKRELMDALAKADERKTELDE 333
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 25.4 bits (53), Expect = 2.3
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 242 KDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTERNVEKNNEKLQTVLDKYSLE 301
K+LE + D K N+++ K + C ER K E + D++ L+
Sbjct: 1759 KELEQ-TLIDAKIPACHWNLADLPDIKRLSCAEICQLVKERARAKRREDV----DRFDLQ 1813
Query: 302 NNSQVKLDEEDSDDSEIKHQDEDDTCSSSCG 332
+ ++ + DD E D+DD ++ G
Sbjct: 1814 HADSNGGEDGNEDDDEDDEDDDDDDDDTTTG 1844
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Query: 309 DEEDSDDSEIKHQDEDDTCS 328
D+ED DD E DED+ C+
Sbjct: 1197 DDEDEDDDE-DDDDEDEDCA 1215
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.6 bits (51), Expect = 4.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 183 GDIARLKRCTAITTEVCKACVLLEGLNKGLPKL 215
G +L + A++ E CK L EG +GL +L
Sbjct: 91 GSFKQLTKLHALSIEYCKIANLSEGSFQGLKQL 123
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 305 QVKLDEEDSDDSEIKHQDEDDTCSSSC 331
+++ +EEDS D + ++ DT SS C
Sbjct: 341 RLESEEEDSTDETLIEEELTDTDSSMC 367
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 305 QVKLDEEDSDDSEIKHQDEDDTCSSSC 331
+++ +EEDS D + ++ DT SS C
Sbjct: 111 RLESEEEDSTDETLIEEELTDTDSSMC 137
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 305 QVKLDEEDSDDSEIKHQDEDDTCSSSC 331
+++ +EEDS D + ++ DT SS C
Sbjct: 117 RLESEEEDSTDETLIEEELTDTDSSMC 143
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 305 QVKLDEEDSDDSEIKHQDEDDTCSSSC 331
+++ +EEDS D + ++ DT SS C
Sbjct: 111 RLESEEEDSTDETLIEEELTDTDSSMC 137
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.8 bits (49), Expect = 7.0
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 219 KSSKVKKLLDEYNTRQNNLETAV-KDLEDCN-ITDKKTSKTCKNISNGFKQKECNATNCC 276
K ++ K+ D +T+ + ++ V + E N IT+ K I+ KQ + + N
Sbjct: 858 KVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANIS 917
Query: 277 T-----NKTERNVEKNNEKLQTVLDKYSLENNSQVKLDEE 311
+ERNV+K+ +K+ ++ D+ ++ K ++E
Sbjct: 918 KLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDE 957
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.8 bits (49), Expect = 7.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 54 AVAASGGKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITG 94
A+A G ++ T T R NY L LLS D ++G
Sbjct: 3259 AIATLGDLSWDSVSQTSSTSGYRDNYSLQTGLLSPDGSLSG 3299
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 234 QNNLETAVKDLEDCNITDKKTSKT-CKNISN 263
+ L A K+LED +T + +S KNI N
Sbjct: 1554 ERRLSAAEKELEDAQLTKRLSSLVEAKNIQN 1584
>AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14D
protein.
Length = 360
Score = 23.8 bits (49), Expect = 7.0
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 226 LLDEYNTRQNNLE-TAVKDLEDCNITDKKTSKTCKNISNGFKQKECNATNCCTNKTER 282
L+D YN N + T C + ++KT C + + K + NC T+R
Sbjct: 50 LVDIYNKPVNTPDDTQFLTESRCGLYERKTLVCCAGVRSKGKTSLPESPNCGVQLTDR 107
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,720
Number of Sequences: 2123
Number of extensions: 14731
Number of successful extensions: 45
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 19
length of query: 338
length of database: 516,269
effective HSP length: 64
effective length of query: 274
effective length of database: 380,397
effective search space: 104228778
effective search space used: 104228778
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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