GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002807-TA|BGIBMGA002807-PA|IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase,
IPR000340|Dual specificity protein phosphatase
         (181 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.8  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 1   MKLKGTDTIITNADGQRYIESKTNEKIVLSPNAYGFVVDNKPDNTP 46
           + ++G D  +   DG+     + N  I  S   Y FV++   D TP
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVIN--ADQTP 403


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 1   MKLKGTDTIITNADGQRYIESKTNEKIVLSPNAYGFVVDNKPDNTP 46
           + ++G D  +   DG+     + N  I  S   Y FV++   D TP
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVIN--ADQTP 403


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 36  FVVDNKPDNTPALITEHLYV 55
           F  DNK D+    I+++LY+
Sbjct: 213 FFSDNKQDDKIPQISDNLYI 232


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 121 VLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRPAVRPN 165
           +L+   +GV   S   +G   +Y++   DE+ K  +  R A + N
Sbjct: 273 LLIMTCSGVHSESQKLVGVCYEYQDRFSDESKKRRELLRLAQQVN 317


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 36  FVVDNKPDNTPALITEHLYV 55
           F  DNK D+    I+++LY+
Sbjct: 213 FFSDNKQDDKIPQISDNLYI 232


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.138    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,403
Number of Sequences: 317
Number of extensions: 1920
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 181
length of database: 114,650
effective HSP length: 53
effective length of query: 128
effective length of database: 97,849
effective search space: 12524672
effective search space used: 12524672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)