Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002807-TA|BGIBMGA002807-PA|IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase,
IPR000340|Dual specificity protein phosphatase
(181 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0120 - 828834-831143 74 6e-14
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 61 4e-10
11_01_0217 - 1698721-1698875,1699122-1699421,1699840-1699918,169... 60 8e-10
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 60 1e-09
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 59 2e-09
01_04_0135 - 16494605-16494618,16494676-16494829 48 6e-06
10_08_0930 - 21641818-21642240,21642731-21642820,21642902-216429... 46 1e-05
12_01_0078 - 639421-639624,639706-639876,640392-640597,640985-64... 45 3e-05
06_02_0081 - 11527339-11527652,11528166-11528272,11528361-115284... 45 3e-05
11_01_0077 - 602192-602395,602477-602647,603161-603366,605457-60... 44 5e-05
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268... 40 0.001
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 38 0.004
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027... 37 0.011
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893... 34 0.058
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476... 34 0.077
11_01_0730 - 6037375-6037509,6037892-6038019,6038339-6038423,603... 31 0.41
08_02_1265 - 25711144-25711158,25712468-25714154,25714166-25714287 31 0.41
01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678 29 1.6
05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042 28 5.0
03_06_0682 - 35516081-35518303 27 6.6
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464... 27 8.8
05_01_0529 - 4561792-4561854,4561954-4562016,4562413-4562471,456... 27 8.8
05_01_0179 - 1240271-1241600,1241713-1241765 27 8.8
04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471 27 8.8
>05_01_0120 - 828834-831143
Length = 769
Score = 74.1 bits (174), Expect = 6e-14
Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 43 DNTPALITEHLYVGSQDCTAEN--VLVQHDIRHVLS-LGVKVP--LKID--YKYIDCLDL 95
D + + +H+Y+G D A+N +L ++ I HVL+ +G P K D Y+ + D
Sbjct: 142 DKECSKVADHVYLGG-DAVAKNRDILRKNGITHVLNCVGFVCPEYFKSDLVYRTLWLQDS 200
Query: 96 PEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLV 155
P D+ +L Y D V VHC GVSR++++ I YLM E SFD+A +LV
Sbjct: 201 PTEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLV 260
Query: 156 KTKRPAVRPNDGFRKQLEQ 174
K R PN GF QL Q
Sbjct: 261 KAARGIANPNMGFACQLLQ 279
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 61.3 bits (142), Expect = 4e-10
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 37 VVDNKPDNTPALITEHLYVGSQDCTAENVLVQH-DIRHVLSLGV--------KVPLKIDY 87
+ D P+ IT++LY+G ++H I HVL L + P + DY
Sbjct: 615 ISDAASTERPSQITDYLYIGGALAARSTYTLKHLGITHVLCLCANEIGQAESQQPDRFDY 674
Query: 88 KYIDCLDLPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENMS 147
+ D D+ + + ++ L VLVHC G SR++TV + YLM + +
Sbjct: 675 QNFSINDDENADISDVFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFT 734
Query: 148 FDEAHKLVKTKRPAVRPNDGFRKQLEQL 175
EA ++K PNDGF K L L
Sbjct: 735 LLEAWNMLKKVHRRAHPNDGFAKVLLDL 762
>11_01_0217 -
1698721-1698875,1699122-1699421,1699840-1699918,
1699998-1700062,1700187-1700239,1700654-1701072
Length = 356
Score = 60.5 bits (140), Expect = 8e-10
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 28 VLSPNAYGFVVDNKPD-NTPALITEHLYVGSQDCTAENVLVQHDIRHVLSLGVKVPLKID 86
V+S + F+ D +P + P + G + + + + V+ V L++
Sbjct: 37 VVSSASISFITDCRPGLSIPTEEVRRVVAGEEGAPPVSAVAPGRLLRVVERA-GVGLRVT 95
Query: 87 YKYIDCLDLPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENM 146
+ D E ++ L L ++ D + NVLVHC AGVSR++T+ + YLM+ E
Sbjct: 96 RMAVPLRDTEEENLLDHLEPCLDFI-DEGRKEGNVLVHCFAGVSRSATIIVAYLMRTEQK 154
Query: 147 SFDEAHKLVKTKRPAVRPNDGFRKQLE 173
S +EA + +K + PNDGF +QL+
Sbjct: 155 SLEEALESLKEVNESACPNDGFLEQLK 181
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 59.7 bits (138), Expect = 1e-09
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 28 VLSPNAYGFVVDNKPD-NTPALITEHLYVGSQDCTAENVLVQHDIRHVLSLGVKVPLKID 86
V+S F+ D +P + P + G + + + + V+ V L++
Sbjct: 37 VVSSAFISFITDCRPGLSIPTEEVRRVVAGEEGAPPVSAVAPGRLMRVVERA-GVGLRVT 95
Query: 87 YKYIDCLDLPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENM 146
+ D E ++ L L ++ D + NVLVHC AGVSR++T+ + YLM+ E
Sbjct: 96 RMAVPLRDTEEENLLDHLEPCLDFI-DEGRKEGNVLVHCFAGVSRSATIIVAYLMRTEQK 154
Query: 147 SFDEAHKLVKTKRPAVRPNDGFRKQLE 173
S +EA + +K + PNDGF +QL+
Sbjct: 155 SLEEALESLKEVNESACPNDGFLEQLK 181
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 37 VVDNKPDNTPALITEHLYVGSQDCTAENVLVQH-DIRHVLSL--------GVKVPLKIDY 87
V D P+L+ +L++G +QH I H+L L + P +Y
Sbjct: 688 VSDAANTERPSLVINNLFIGGALAARSMYTLQHLGITHILCLCSNEIGQSDSQFPDLFEY 747
Query: 88 KYIDCLDLPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENMS 147
K D + ++ L ++ Y + VLVHC G SR++T+ + YLM + ++
Sbjct: 748 KNFSISDDDDANISDLFEEASDYFDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLT 807
Query: 148 FDEAHKLVKTKRPAVRPNDGFRKQL 172
+A L+K +PNDGF K L
Sbjct: 808 LAKAWNLLKKVHRRAQPNDGFAKAL 832
>01_04_0135 - 16494605-16494618,16494676-16494829
Length = 55
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 134 TVAIGYLMQYENMSFDEAHKLVKTKRPAVRPNDGFRKQLEQLK 176
T+ + YLM+ MS + A LV++KRP V PN+GF QLE +
Sbjct: 5 TIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGFMSQLENFE 47
>10_08_0930 -
21641818-21642240,21642731-21642820,21642902-21642984,
21643512-21643605,21644366-21644488,21644893-21645168
Length = 362
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 123 VHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRPAVRPNDGFRKQLEQ 174
VHC AG R++TV + YL+QY+ M+ EA++ V+ +RP V R+ +EQ
Sbjct: 175 VHCKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRRPRVLLASAQRQAVEQ 226
>12_01_0078 -
639421-639624,639706-639876,640392-640597,640985-641100,
641669-641855,642104-642338
Length = 372
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 118 KQNVLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRP 160
K V VHC AG+ R VAI Y+ +ENM+ A++ + +KRP
Sbjct: 276 KGRVYVHCTAGLGRAPAVAIAYMFWFENMNLKTAYEKLTSKRP 318
>06_02_0081 -
11527339-11527652,11528166-11528272,11528361-11528418,
11529240-11529267,11530233-11530499
Length = 257
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 111 LRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRPAVRPNDGFRK 170
L C K VLVHC +G SR++ I +LM+ + + + VK +RP V+ D ++
Sbjct: 98 LEQCERDKARVLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERRPQVQLADAAQR 157
Query: 171 QL 172
QL
Sbjct: 158 QL 159
>11_01_0077 -
602192-602395,602477-602647,603161-603366,605457-605682
Length = 268
Score = 44.4 bits (100), Expect = 5e-05
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 118 KQNVLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRP 160
K V VHC AG+ R VAI Y+ +ENM A++ + +KRP
Sbjct: 172 KGRVYVHCTAGLGRAPAVAIAYMFWFENMDLRTAYEKLTSKRP 214
>06_01_0372 +
2684208-2684390,2684867-2684968,2685197-2685290,
2685450-2685532,2685684-2685773,2686931-2687173
Length = 264
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 123 VHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRPAV 162
+HC AG R++T+ + YL++Y+NM+ A + V++KR V
Sbjct: 137 IHCKAGRGRSTTIVLCYLVKYKNMTPSTAFEHVRSKRARV 176
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 123 VHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRPAV 162
VHC AG R++T+ + YL++Y +MS + A V++ RP V
Sbjct: 161 VHCKAGRGRSTTIVLCYLIKYRSMSPEAALDHVRSIRPRV 200
>02_05_0549 +
29900714-29900953,29902224-29902323,29902578-29902719,
29902720-29902826,29903179-29903480
Length = 296
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 129 VSRTSTVAIGYLMQYENMSFDEAHKLVKTKRPAVRPNDGFRKQL 172
+SR++ + IGYLM+ ++++ VK +RP V+ D + QL
Sbjct: 159 ISRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQVQLTDASQNQL 202
>05_06_0131 -
25888434-25888931,25889105-25889155,25889249-25889331,
25889733-25889826,25890188-25890310,25890909-25891154
Length = 364
Score = 34.3 bits (75), Expect = 0.058
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 123 VHCNAGVSRTSTVAIGYLMQYENMSFDEA 151
VHC AG R++T+ + YL++Y NM+ + A
Sbjct: 165 VHCKAGRGRSTTIVLCYLIKYRNMTPEAA 193
>12_01_0584 -
4762476-4762613,4763986-4764075,4765048-4765146,
4766032-4766154,4766243-4766405,4767307-4767356,
4767826-4767942,4769477-4769683,4769763-4769900,
4771212-4771274,4771358-4771441,4771933-4772084,
4772219-4772357,4772814-4772924
Length = 557
Score = 33.9 bits (74), Expect = 0.077
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 121 VLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKR-PAVRPND 166
+LVHC G +RT + + YLM+ + S EA + +R P + ND
Sbjct: 200 ILVHCTHGHNRTGFMIVHYLMRTQLSSVTEALNIFAQRRPPGIYKND 246
>11_01_0730 -
6037375-6037509,6037892-6038019,6038339-6038423,
6038525-6038614,6040015-6040113,6040207-6040335,
6041341-6041463,6041549-6041711,6042331-6042380,
6042593-6042706,6042993-6043199,6043275-6043412,
6044708-6044770,6044845-6044928,6045014-6045094,
6045212-6045363,6045479-6045614,6045991-6046107
Length = 697
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 121 VLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHKLVKTKRP 160
+LVHC G +RT + I YLM+ + EA + +RP
Sbjct: 228 ILVHCTHGHNRTGFMIIHYLMRTQVSCVAEAINIFAKRRP 267
>08_02_1265 - 25711144-25711158,25712468-25714154,25714166-25714287
Length = 607
Score = 31.5 bits (68), Expect = 0.41
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 89 YIDCLDLPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENMSF 148
+ + + + + PLL + L +L D + N V CN G++RT IG + + F
Sbjct: 164 FFESIGIAPGEYEPLLPRDLMFLNDDETMLDNFRVLCNYGIARTK---IGRIYRDATEVF 220
Query: 149 DEAHKLVKTKRPAV 162
H ++ +K A+
Sbjct: 221 SFGHGVLASKLKAL 234
>01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678
Length = 261
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 121 VLVHCNAGVSRTSTVAIGYLMQYENMS-FDEAHKLVKTKRPAVRPNDGFRKQLEQ 174
V VHC G R+ V L+ + A ++++ KRP++ N RK LE+
Sbjct: 175 VYVHCAYGHGRSVCVMCALLVALGLAEDWKAAEQMIREKRPSISMNSLHRKSLEE 229
>05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042
Length = 1211
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 90 IDCLDLPEIDVRPLLGKSLP--YLRDCVLLKQNVLV 123
I +D P I P L SL Y+RDC LLK++ V
Sbjct: 1158 ISIVDCPNISSLPDLPSSLQHIYIRDCPLLKESCRV 1193
>03_06_0682 - 35516081-35518303
Length = 740
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 129 VSRTSTVAIGYLM-QYENMS-FDEAHKLVKTKRPAV 162
VS A YLM QY+ M +E HK++K K PA+
Sbjct: 14 VSMVKEKASSYLMEQYKVMEGMEEQHKILKRKLPAI 49
>08_02_0502 +
17844775-17845092,17845528-17845634,17846039-17846492,
17846623-17846694,17846804-17846925,17847079-17847294,
17847392-17847500,17847618-17847730,17847916-17848063,
17848274-17848396
Length = 593
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 94 DLPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAGVSRTSTVAIGYLMQYENMSFDEAHK 153
++ +D+R L + L + + V C G R+ I YL ++ AHK
Sbjct: 359 EVDSMDLRKKLSFCVGLLLRLIRKNYRIYVTCTTGYDRSPACVIAYLHWVQDTPLHIAHK 418
Query: 154 LVKTKRPAVRPN 165
+ T + RP+
Sbjct: 419 FI-TGLHSCRPD 429
>05_01_0529 -
4561792-4561854,4561954-4562016,4562413-4562471,
4562887-4563988
Length = 428
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 65 VLVQHDIRHVLSLGVKVPLKIDYKYIDCLDLPEIDVRPLLGKSLPYLRDCVLLKQNVLVH 124
V+ D RH+L + + Y D + RP + SLP+L C L NVL
Sbjct: 51 VISHPDHRHLLPRYHLGDAIVGFFYSDTFTNVTGEGRPFVDPSLPFLPKCEFL--NVLDS 108
Query: 125 CN 126
CN
Sbjct: 109 CN 110
>05_01_0179 - 1240271-1241600,1241713-1241765
Length = 460
Score = 27.1 bits (57), Expect = 8.8
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 23/94 (24%)
Query: 43 DNTPALITEHLYVGSQDCTA--------ENVLVQHDIRHVLSLGVKVPLKIDYKYIDCLD 94
D P+++ +Y+G C A ++ V+ + HVL G K PL +D
Sbjct: 375 DRFPSILGNTVYLGMNSCCAVGFGLCHLKDRTVEPRLEHVLESGRKAPLLVDISLFH--- 431
Query: 95 LPEIDVRPLLGKSLPYLRDCVLLKQNVLVHCNAG 128
LG+ +P+ R C L + LV C+ G
Sbjct: 432 ---------LGRIVPFARPCTL--EEYLV-CSVG 453
>04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471
Length = 331
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 1 MKLKGTDTIITNADGQRYIESKTNEKIVLSPNAYGFVVDNKPDNTPALITEHLYVGSQDC 60
+K G D Q +TN+ V S A NKPD + ++ +H +
Sbjct: 86 VKGNGRDKTKEQETQQNVQHDQTNKPEVSSSVAVQHDQSNKPDLSSSVAVQHDQTNKPEL 145
Query: 61 TAENVLVQHDIRHVLSLGVKVPLKID 86
++ +V VQHD + L V ++ D
Sbjct: 146 SS-SVAVQHDQSNKPDLSSSVAVQHD 170
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.138 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,194,396
Number of Sequences: 37544
Number of extensions: 205477
Number of successful extensions: 445
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 426
Number of HSP's gapped (non-prelim): 25
length of query: 181
length of database: 14,793,348
effective HSP length: 78
effective length of query: 103
effective length of database: 11,864,916
effective search space: 1222086348
effective search space used: 1222086348
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -