Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002805-TA|BGIBMGA002805-PA|undefined
(61 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8H516 Cluster: Putative uncharacterized protein OJ1793... 32 1.9
UniRef50_Q8IX01 Cluster: Putative splicing factor, arginine/seri... 32 1.9
UniRef50_Q2N9M4 Cluster: Putative uncharacterized protein; n=1; ... 32 2.6
UniRef50_Q4D606 Cluster: Putative uncharacterized protein; n=2; ... 32 2.6
UniRef50_Q8N2R8 Cluster: Protein FAM43A; n=20; Euteleostomi|Rep:... 31 4.5
UniRef50_A0H597 Cluster: DNA mismatch repair protein MutS; n=3; ... 31 5.9
UniRef50_Q8S9G8 Cluster: Squamosa promoter-binding-like protein ... 31 5.9
UniRef50_Q4SVG9 Cluster: Chromosome undetermined SCAF13758, whol... 30 7.8
UniRef50_Q311X9 Cluster: Sec-independent protein translocase Tat... 30 7.8
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 30 7.8
UniRef50_A7F9H0 Cluster: Predicted protein; n=1; Sclerotinia scl... 30 7.8
>UniRef50_Q8H516 Cluster: Putative uncharacterized protein
OJ1793_E11.116; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1793_E11.116 - Oryza sativa subsp. japonica (Rice)
Length = 321
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 19 RESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRRR 60
+ SP LS S+ P +PD+ +AS A G G + L RRR
Sbjct: 144 KSSPPLSLSLRPPLPDSVGSASSYRAAATGSGGKRELPPRRR 185
>UniRef50_Q8IX01 Cluster: Putative splicing factor,
arginine/serine-rich 14; n=27; Theria|Rep: Putative
splicing factor, arginine/serine-rich 14 - Homo sapiens
(Human)
Length = 1082
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLL 56
+ R++PGLS++ P L PD DAA D P G ++P L
Sbjct: 711 KHHGRQAPGLSQAKPSL-PDRNDAAKDCPPDPVGPSPQDPSL 751
>UniRef50_Q2N9M4 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter litoralis HTCC2594|Rep: Putative
uncharacterized protein - Erythrobacter litoralis
(strain HTCC2594)
Length = 148
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Query: 18 ARESPGLSESIPPLVPDATDAASDETPALDGCGAEEP 54
A +PGLS+ +PP PDA +AA+ PA+D AE P
Sbjct: 15 AMAAPGLSQDMPPAGPDAAEAAA---PAVDP-AAEMP 47
>UniRef50_Q4D606 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 413
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 1 MCADREKEKAIFITRSQA-RESPGLSESIPPLVPDATDAASDETPALD 47
M A++E EK I + +E GL S P VP ATD +D A D
Sbjct: 162 MLAEQEFEKQIRARMASVEKEESGLGGSESPAVPSATDVTADTVTAQD 209
>UniRef50_Q8N2R8 Cluster: Protein FAM43A; n=20; Euteleostomi|Rep:
Protein FAM43A - Homo sapiens (Human)
Length = 423
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 13 ITRSQARESPGLSESIPPLVPDATDA-ASDETPALDGCGAEEP 54
+TR + +S G SI PDAT A A D + DG A+EP
Sbjct: 378 VTRLLSGDSTGSESSIEGGGPDATSATAGDSSRQADGASADEP 420
>UniRef50_A0H597 Cluster: DNA mismatch repair protein MutS; n=3;
Chloroflexi (class)|Rep: DNA mismatch repair protein
MutS - Chloroflexus aggregans DSM 9485
Length = 968
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPAL--DGCGAEEPLLRR 58
R+ R+ PG++++I PL+PD D P L D C LL R
Sbjct: 443 RAALRKLPGIAQAIAPLLPDLLAPEMDGEPLLTFDPCSDVLDLLER 488
>UniRef50_Q8S9G8 Cluster: Squamosa promoter-binding-like protein
7; n=2; Arabidopsis thaliana|Rep: Squamosa
promoter-binding-like protein 7 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 801
Score = 30.7 bits (66), Expect = 5.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 22 PGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
P LS +PPL+P T A S+ P+ + G+ +R+R
Sbjct: 56 PVLSPPLPPLIPTQTPAESELDPSPEESGSGSDRVRKR 93
>UniRef50_Q4SVG9 Cluster: Chromosome undetermined SCAF13758, whole
genome shotgun sequence; n=4; root|Rep: Chromosome
undetermined SCAF13758, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1265
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 1 MCADREKEKAIF--ITRSQAR----ESPGLSESIPPLVPDATDAASDETPALDGCGAEE 53
+C E+E A F ITRS R SP S P PDA+ A S A++ CG+ E
Sbjct: 1183 LCPTNEEEHAPFSPITRSSGRLWSSSSPD-RRSEPSGPPDASSALSVAVSAMEDCGSPE 1240
>UniRef50_Q311X9 Cluster: Sec-independent protein translocase TatC;
n=3; Desulfovibrio|Rep: Sec-independent protein
translocase TatC - Desulfovibrio desulfuricans (strain
G20)
Length = 368
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 4 DREKEKAIFITRSQARESPGLSESIPPL--VPDATDAASDE 42
D E A ++ A +P LSES+PP+ V T+AA+DE
Sbjct: 69 DPSAESADDNNKAGAENAPALSESVPPVPAVNRVTEAAADE 109
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 13 ITRSQARESPGLSESIPPLVPDATDAASDE-TPALDGCGAEEP 54
+ R AR SP S S P P A+ ++S + P LDG A P
Sbjct: 62 LNRPLARPSPAPSSSSPSPTPSASTSSSAKWIPVLDGAHARSP 104
>UniRef50_A7F9H0 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 386
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 4 DREKEKAIFITRSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEE 53
+R K+K + R + S GL + P+V D+ D + D T A+DG AE+
Sbjct: 316 ERAKDKVV---RMGDKISRGLERQVEPVV-DSDDISPDPTLAIDGAEAED 361
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,915,484
Number of Sequences: 1657284
Number of extensions: 2109053
Number of successful extensions: 5822
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5819
Number of HSP's gapped (non-prelim): 11
length of query: 61
length of database: 575,637,011
effective HSP length: 41
effective length of query: 20
effective length of database: 507,688,367
effective search space: 10153767340
effective search space used: 10153767340
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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