Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002805-TA|BGIBMGA002805-PA|undefined
(61 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539... 28 0.83
10_07_0177 - 13841148-13841267,13841569-13841645,13842710-138428... 27 1.4
12_02_0541 + 20162313-20162374,20162670-20163419,20164627-201648... 27 1.9
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 27 1.9
05_05_0194 + 23139587-23140249 27 2.5
12_02_0213 - 15745459-15745908,15745981-15746559 25 5.8
12_02_0062 - 13084207-13084800 25 5.8
12_01_1030 - 10578110-10578874,10579217-10579336 25 5.8
11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793 25 5.8
11_04_0300 - 16130589-16131158,16131594-16131680 25 5.8
11_04_0061 + 13013963-13014070,13015228-13015422,13017927-130180... 25 5.8
11_01_0144 + 1187532-1187813,1188913-1189454,1189621-1189707,119... 25 5.8
08_02_1235 + 25443721-25444146 25 5.8
07_03_0614 - 19974200-19975426 25 5.8
07_03_0416 - 17962740-17963009,17963076-17963732 25 5.8
07_03_0201 - 15036103-15037329 25 5.8
07_01_1098 - 10083800-10084447,10084523-10084792 25 5.8
06_01_0016 + 184804-185025,185121-185237,185324-185737,185827-18... 25 5.8
04_01_0472 - 6144655-6145182,6145204-6145881,6149337-6149765,614... 25 5.8
04_01_0298 - 3981944-3982348 25 5.8
04_01_0230 - 2921845-2922690 25 5.8
03_05_0480 + 24740567-24741559 25 5.8
03_05_0308 - 22977542-22978174,22978202-22978387 25 5.8
02_04_0176 + 20658610-20659836 25 5.8
01_03_0141 + 13015330-13016175 25 5.8
01_02_0066 + 10785843-10786835 25 5.8
01_01_0042 + 317586-317640,318128-318185,318799-319236,320426-32... 25 5.8
12_02_0292 + 16979550-16980662,16983249-16983731 25 7.7
03_06_0425 - 33847906-33848892 25 7.7
02_05_0205 + 26755024-26756217 25 7.7
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 25 7.7
>02_02_0584 -
11853149-11853573,11853673-11853787,11853868-11853981,
11854049-11854108,11854265-11854600,11854681-11854724,
11854776-11855507,11855736-11855921,11856012-11856153,
11856250-11856300
Length = 734
Score = 28.3 bits (60), Expect = 0.83
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 3 ADREKEKAIFITRSQARESPGLSESIPPLVPDATDAASDETPALDG 48
A EK+K +S A S S PP P ++SD+TP G
Sbjct: 494 AAAEKKKTAVKKKSAATTSKPASPPSPPPSPPVQQSSSDQTPLAAG 539
>10_07_0177 -
13841148-13841267,13841569-13841645,13842710-13842860,
13842942-13843056,13843145-13843236,13843317-13843370,
13843849-13843935,13844023-13844109,13844191-13844274,
13844359-13844445,13844793-13845549,13846491-13846648
Length = 622
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 16 SQARESPGLSESIPPLVPDATDAASDET 43
S +SPGL+ PL P TD S ET
Sbjct: 147 SNLGQSPGLNNGPVPLYPSGTDKNSGET 174
>12_02_0541 +
20162313-20162374,20162670-20163419,20164627-20164820,
20165001-20165074,20165094-20165114
Length = 366
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 25 SESIPPLVPDATDAASDETPA 45
+++ P + PD TD + DETPA
Sbjct: 210 TDTKPEIEPDITDLSEDETPA 230
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 8 EKAIFITRSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
++ + + S + S +S PP +DAA+D+ P L E P +R R
Sbjct: 42 QQLLRLDASSSSSSFSVSPPPPPRTSPTSDAAADDAPPLPEEEDEVPCIRPR 93
>05_05_0194 + 23139587-23140249
Length = 220
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 29 PPLVPDATDAASDETPALDGCGAEEPL 55
PPL+P AA+ +PA G++ P+
Sbjct: 9 PPLLPVTNPAAAGSSPAATAVGSDAPI 35
>12_02_0213 - 15745459-15745908,15745981-15746559
Length = 342
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 303 TDTEPEIEPDITDPSEDETP 322
>12_02_0062 - 13084207-13084800
Length = 197
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 116 TDTEPEIEPDITDPSEDETP 135
>12_01_1030 - 10578110-10578874,10579217-10579336
Length = 294
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 213 TDTEPEIEPDITDPSEDETP 232
>11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793
Length = 576
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 495 TDTEPEIEPDITDPSEDETP 514
>11_04_0300 - 16130589-16131158,16131594-16131680
Length = 218
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 137 TDTEPEIEPDITDPSEDETP 156
>11_04_0061 +
13013963-13014070,13015228-13015422,13017927-13018046,
13018377-13019015
Length = 353
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 314 TDTEPEIEPDITDPSEDETP 333
>11_01_0144 +
1187532-1187813,1188913-1189454,1189621-1189707,
1190151-1190260,1190346-1190464,1190548-1190634,
1191554-1191853
Length = 508
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 427 TDTEPEIEPDITDPSEDETP 446
>08_02_1235 + 25443721-25444146
Length = 141
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPALDGC 49
+ AR+ LSE I V +AT+A + E GC
Sbjct: 56 KGTARKEAALSELIERKVAEATEACAGEAAGDAGC 90
>07_03_0614 - 19974200-19975426
Length = 408
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 327 TDTEPEIEPDITDPSEDETP 346
>07_03_0416 - 17962740-17963009,17963076-17963732
Length = 308
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 227 TDTEPEIKPDITDPSEDETP 246
>07_03_0201 - 15036103-15037329
Length = 408
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 327 TDTEPEIEPDITDPSEDETP 346
>07_01_1098 - 10083800-10084447,10084523-10084792
Length = 305
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 224 TDTKPEIEPDITDPSEDETP 243
>06_01_0016 +
184804-185025,185121-185237,185324-185737,185827-186888
Length = 604
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 35 ATDAASDETPALDGCGAEEPLLRRRR 60
A+ ++S TP D GA LLR+ R
Sbjct: 42 ASSSSSSSTPLADALGAARDLLRKTR 67
>04_01_0472 -
6144655-6145182,6145204-6145881,6149337-6149765,
6149930-6150123,6150222-6150261
Length = 622
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 541 TDAEPEIEPDITDPSEDETP 560
>04_01_0298 - 3981944-3982348
Length = 134
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 53 TDTEPEIEPDITDPSEDETP 72
>04_01_0230 - 2921845-2922690
Length = 281
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 200 TDTEPEIEPDITDPSEDETP 219
>03_05_0480 + 24740567-24741559
Length = 330
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 249 TDTEPEIEPDITDPSEDETP 268
>03_05_0308 - 22977542-22978174,22978202-22978387
Length = 272
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 191 TDTEPEIEPDITDPSEDETP 210
>02_04_0176 + 20658610-20659836
Length = 408
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 327 TDTEPEIEPDITDPSEDETP 346
>01_03_0141 + 13015330-13016175
Length = 281
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 200 TDTEPEIEPDITDPSEDETP 219
>01_02_0066 + 10785843-10786835
Length = 330
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 25 SESIPPLVPDATDAASDETP 44
+++ P + PD TD + DETP
Sbjct: 249 TDTEPEIEPDITDPSEDETP 268
>01_01_0042 +
317586-317640,318128-318185,318799-319236,320426-320467,
320468-320648,320838-320867
Length = 267
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 29 PPLVPDATDAASDETPALDGCGAEE--PLLRR 58
P + P+A AAS + PAL G++E P +RR
Sbjct: 146 PMVDPEAHAAASSDGPALPTRGSDEFKPFIRR 177
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 25 SESIPPLVPDATDAASDETPA 45
+++ P + PD TD + DE PA
Sbjct: 327 TDTEPEIEPDITDPSEDEAPA 347
>03_06_0425 - 33847906-33848892
Length = 328
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 29 PPLVPDATDAASDETP 44
P + PD TD + DETP
Sbjct: 251 PEIEPDITDPSEDETP 266
>02_05_0205 + 26755024-26756217
Length = 397
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 29 PPLVPDATDAASDETP 44
P + PD TD + DETP
Sbjct: 320 PEIEPDITDPSEDETP 335
>02_01_0077 -
546033-546223,546314-546566,546635-546865,
547165-547331,547369-548008
Length = 493
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 21 SPGLSESIPPLVPDATDAASDETP 44
SPG S+S P +PD+ + +TP
Sbjct: 52 SPGYSDSPEPPLPDSPPSQEPDTP 75
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,954,887
Number of Sequences: 37544
Number of extensions: 62395
Number of successful extensions: 262
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 232
Number of HSP's gapped (non-prelim): 31
length of query: 61
length of database: 14,793,348
effective HSP length: 41
effective length of query: 20
effective length of database: 13,254,044
effective search space: 265080880
effective search space used: 265080880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -