Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002805-TA|BGIBMGA002805-PA|undefined
(61 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020586-1|AAH20586.1| 988|Homo sapiens SFRS14 protein protein. 32 0.24
AF518874-1|AAN77117.1| 1082|Homo sapiens arginine/serine-rich 14... 32 0.24
AC004447-1|AAC06129.1| 949|Homo sapiens KIAA0365 protein. 32 0.24
AB002363-1|BAA20820.2| 1181|Homo sapiens KIAA0365 protein protein. 32 0.24
BC064989-1|AAH64989.1| 423|Homo sapiens family with sequence si... 31 0.57
BC039689-1|AAH39689.1| 423|Homo sapiens family with sequence si... 31 0.57
AK074503-1|BAC11027.1| 423|Homo sapiens protein ( Homo sapiens ... 31 0.57
L10334-1|AAA59951.1| 356|Homo sapiens nueroendocrine-specific p... 29 1.7
L10333-1|AAA59950.1| 776|Homo sapiens nueroendocrine-specific p... 29 1.7
DQ355431-1|ABC71342.1| 252|Homo sapiens reticulon 1 isoform A p... 29 1.7
BC111694-1|AAI11695.1| 702|Homo sapiens RTN1 protein protein. 29 1.7
BC090862-1|AAH90862.1| 776|Homo sapiens reticulon 1 protein. 29 1.7
>BC020586-1|AAH20586.1| 988|Homo sapiens SFRS14 protein protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLL 56
+ R++PGLS++ P L PD DAA D P G ++P L
Sbjct: 659 KHHGRQAPGLSQAKPSL-PDRNDAAKDCPPDPVGPSPQDPSL 699
>AF518874-1|AAN77117.1| 1082|Homo sapiens arginine/serine-rich 14
splicing factor protein.
Length = 1082
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLL 56
+ R++PGLS++ P L PD DAA D P G ++P L
Sbjct: 711 KHHGRQAPGLSQAKPSL-PDRNDAAKDCPPDPVGPSPQDPSL 751
>AC004447-1|AAC06129.1| 949|Homo sapiens KIAA0365 protein.
Length = 949
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLL 56
+ R++PGLS++ P L PD DAA D P G ++P L
Sbjct: 568 KHHGRQAPGLSQAKPSL-PDRNDAAKDCPPDPVGPSPQDPSL 608
>AB002363-1|BAA20820.2| 1181|Homo sapiens KIAA0365 protein protein.
Length = 1181
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 RSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLL 56
+ R++PGLS++ P L PD DAA D P G ++P L
Sbjct: 810 KHHGRQAPGLSQAKPSL-PDRNDAAKDCPPDPVGPSPQDPSL 850
>BC064989-1|AAH64989.1| 423|Homo sapiens family with sequence
similarity 43, member A protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.57
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 13 ITRSQARESPGLSESIPPLVPDATDA-ASDETPALDGCGAEEP 54
+TR + +S G SI PDAT A A D + DG A+EP
Sbjct: 378 VTRLLSGDSTGSESSIEGGGPDATSATAGDSSRQADGASADEP 420
>BC039689-1|AAH39689.1| 423|Homo sapiens family with sequence
similarity 43, member A protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.57
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 13 ITRSQARESPGLSESIPPLVPDATDA-ASDETPALDGCGAEEP 54
+TR + +S G SI PDAT A A D + DG A+EP
Sbjct: 378 VTRLLSGDSTGSESSIEGGGPDATSATAGDSSRQADGASADEP 420
>AK074503-1|BAC11027.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ90022 fis, clone HEMBA1000907. ).
Length = 423
Score = 31.1 bits (67), Expect = 0.57
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 13 ITRSQARESPGLSESIPPLVPDATDA-ASDETPALDGCGAEEP 54
+TR + +S G SI PDAT A A D + DG A+EP
Sbjct: 378 VTRLLSGDSTGSESSIEGGGPDATSATAGDSSRQADGASADEP 420
>L10334-1|AAA59951.1| 356|Homo sapiens nueroendocrine-specific
protein B protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 16 SQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
S + ESP + PP+ P A DA +ET G AEE RR
Sbjct: 55 SASEESPKREQDSPPMKPSALDAIREET----GVRAEERAPSRR 94
>L10333-1|AAA59950.1| 776|Homo sapiens nueroendocrine-specific
protein A protein.
Length = 776
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 16 SQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
S + ESP + PP+ P A DA +ET G AEE RR
Sbjct: 475 SASEESPKREQDSPPMKPSALDAIREET----GVRAEERAPSRR 514
>DQ355431-1|ABC71342.1| 252|Homo sapiens reticulon 1 isoform A
protein.
Length = 252
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 16 SQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
S + ESP + PP+ P A DA +ET G AEE RR
Sbjct: 105 SASEESPKREQDSPPMKPSALDAIREET----GVRAEERAPSRR 144
>BC111694-1|AAI11695.1| 702|Homo sapiens RTN1 protein protein.
Length = 702
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 16 SQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
S + ESP + PP+ P A DA +ET G AEE RR
Sbjct: 401 SASEESPKREQDSPPMKPSALDAIREET----GVRAEERAPSRR 440
>BC090862-1|AAH90862.1| 776|Homo sapiens reticulon 1 protein.
Length = 776
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 16 SQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEPLLRRR 59
S + ESP + PP+ P A DA +ET G AEE RR
Sbjct: 475 SASEESPKREQDSPPMKPSALDAIREET----GVRAEERAPSRR 514
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,581,466
Number of Sequences: 224733
Number of extensions: 304041
Number of successful extensions: 846
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 841
Number of HSP's gapped (non-prelim): 12
length of query: 61
length of database: 73,234,838
effective HSP length: 41
effective length of query: 20
effective length of database: 64,020,785
effective search space: 1280415700
effective search space used: 1280415700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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