Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002805-TA|BGIBMGA002805-PA|undefined
(61 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical pr... 27 1.6
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 25 4.8
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 25 4.8
Z79600-12|CAB70221.2| 415|Caenorhabditis elegans Hypothetical p... 25 6.3
Z75540-6|CAB70215.2| 415|Caenorhabditis elegans Hypothetical pr... 25 6.3
U00058-6|AAA50729.2| 189|Caenorhabditis elegans Hypothetical pr... 25 6.3
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 25 8.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 25 8.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 25 8.3
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 25 8.3
>U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical
protein F10E7.8 protein.
Length = 929
Score = 27.1 bits (57), Expect = 1.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 16 SQARESPGLSESIPPLVPD 34
S+ +SPG S S PP +PD
Sbjct: 412 SKKEDSPGASSSTPPSIPD 430
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 14 TRSQARESPGLSESIPPLVPDATDAASDETPALDGCG 50
T S++ + P VP T+ + DGCG
Sbjct: 1012 TSSESDSESAPEQETEPTVPSTTETTESPSTPTDGCG 1048
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 25.4 bits (53), Expect = 4.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 21 SPGLSESIPPLVPDATDA-ASDETPALDG-CGAEEPLLRR 58
SPG + PP+ P +T S TP L G A+ P +++
Sbjct: 218 SPGAQSTAPPVFPTSTPTPTSTPTPLLPGNLRADSPAVQQ 257
>Z79600-12|CAB70221.2| 415|Caenorhabditis elegans Hypothetical
protein F37D6.6 protein.
Length = 415
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 24 LSESIPPLVPDATDAASDETPALDGCGAEEP 54
L + PP VP+AT D++P +++P
Sbjct: 207 LPDRPPPSVPNATPPLPDDSPPCTSRSSQDP 237
>Z75540-6|CAB70215.2| 415|Caenorhabditis elegans Hypothetical
protein F37D6.6 protein.
Length = 415
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 24 LSESIPPLVPDATDAASDETPALDGCGAEEP 54
L + PP VP+AT D++P +++P
Sbjct: 207 LPDRPPPSVPNATPPLPDDSPPCTSRSSQDP 237
>U00058-6|AAA50729.2| 189|Caenorhabditis elegans Hypothetical
protein W03A5.5 protein.
Length = 189
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 6 EKEKAIFITRSQARESPGLSESIPPLVPDATDAASD 41
E+ +F Q +PG S +PP + A+S+
Sbjct: 146 ERRSRMFSQPQQRNPAPGFSSPLPPTTVSSQSASSE 181
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 24.6 bits (51), Expect = 8.3
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 4 DREKEKAIFITRSQARESPGLSESIPPLVPDATDAASDETPALDGCGAEEP 54
D E+++ +S++ ++ GL E+I + +SDE D + EP
Sbjct: 12 DEEEDEKSNGNKSESPQNAGLEETIQNFIATFLPGSSDEPHITDIPSSSEP 62
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 24.6 bits (51), Expect = 8.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 6 EKEKAIFITRSQARESPGLSESIPPLVPDATD----AASDETPALDG 48
+ + A T++ E L E IPPLV +A + A +++T +DG
Sbjct: 355 DPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDG 401
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 24.6 bits (51), Expect = 8.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 6 EKEKAIFITRSQARESPGLSESIPPLVPDATD----AASDETPALDG 48
+ + A T++ E L E IPPLV +A + A +++T +DG
Sbjct: 355 DPQVAAAATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDG 401
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 24.6 bits (51), Expect = 8.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 7 KEKAIFITRSQARESPGLSESIPPLVPDATDAASDETPA 45
K+KA + +P S PP PDA AA D A
Sbjct: 27 KKKAPPPKSASKMTAPPAPASAPPAAPDAAPAAPDAAAA 65
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,523,401
Number of Sequences: 27539
Number of extensions: 46339
Number of successful extensions: 99
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 92
Number of HSP's gapped (non-prelim): 10
length of query: 61
length of database: 12,573,161
effective HSP length: 42
effective length of query: 19
effective length of database: 11,416,523
effective search space: 216913937
effective search space used: 216913937
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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