GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002805-TA|BGIBMGA002805-PA|undefined
         (61 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   3.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   3.5  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    19   6.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 4   DREKEKAIFITRSQARESPGLSESIPPLVPD 34
           + E E AI +   Q+   PG  + +  L PD
Sbjct: 244 EEEAEGAITV-ELQSENIPGFDDYMASLTPD 273


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 4   DREKEKAIFITRSQARESPGLSESIPPLVPD 34
           + E E AI +   Q+   PG  + +  L PD
Sbjct: 334 EEEAEGAITV-ELQSENIPGFDDYMASLTPD 363


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
          receptor 2 protein.
          Length = 210

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/19 (31%), Positives = 11/19 (57%)

Query: 15 RSQARESPGLSESIPPLVP 33
          ++ + E P   E +PP+ P
Sbjct: 31 KAGSAEQPKEQEPLPPVTP 49


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,674
Number of Sequences: 429
Number of extensions: 330
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 61
length of database: 140,377
effective HSP length: 41
effective length of query: 20
effective length of database: 122,788
effective search space:  2455760
effective search space used:  2455760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)
S2: 35 (18.2 bits)