Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002804-TA|BGIBMGA002804-PA|IPR001452|Src homology-3,
IPR000219|DH, IPR000108|Neutrophil cytosol factor 2
(351 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 46 8e-06
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 43 8e-05
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 43 8e-05
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 42 1e-04
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 41 3e-04
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 41 3e-04
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 40 4e-04
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 38 0.002
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 37 0.005
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 36 0.009
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 34 0.026
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 33 0.046
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 33 0.080
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 32 0.11
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 31 0.19
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 31 0.25
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.32
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 30 0.57
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 29 0.75
SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Le... 29 0.99
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 28 2.3
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 27 4.0
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 27 5.3
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 26 7.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.2
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 26 9.2
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 46.0 bits (104), Expect = 8e-06
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 262 DCPQVCALYAYAAAQPDELSLAEGDVVNVTRKTA-EGWYYGERTRDGEAGWFPGAYSAEI 320
D V ALYAY A ELS+ EGD++ VT + A GW E +G G FP Y ++
Sbjct: 585 DSSYVKALYAYTAQSDMELSIQEGDIIQVTNRNAGNGW--SEGILNGVTGQFPANYVTDV 642
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 42.7 bits (96), Expect = 8e-05
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 269 LYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSAEIASPHVRAR 328
+Y Y+ + +E+ L E + + + +GW+ GE ++ G+ G FP Y EI P+ A
Sbjct: 733 IYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSK-GQQGLFPSNY-VEITGPNETAN 790
Query: 329 N 329
N
Sbjct: 791 N 791
Score = 33.9 bits (74), Expect = 0.035
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 259 AGWDCPQVCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSA 318
AG V A+Y Y A + +ELS E +++ W+ GE G G FP Y
Sbjct: 798 AGGPGKSVKAIYDYQAQEDNELSFFEDEIIANVDCVDPNWWEGE--CHGHRGLFPSNYVE 855
Query: 319 EI 320
EI
Sbjct: 856 EI 857
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 42.7 bits (96), Expect = 8e-05
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 266 VCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRD-----GEAGWFPGAYSAEI 320
V A+Y++ EL L GDV+ V+ + WY GE+ G +G FP Y I
Sbjct: 284 VKAIYSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAEKLGNSGMFPVNYCTRI 343
Query: 321 ASPHVR 326
HV+
Sbjct: 344 YDLHVQ 349
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 268 ALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSAE 319
ALY +A P+E+++ + +++ + +K GW+ ++G GW P Y E
Sbjct: 1113 ALYDFAGRSPNEMTIKKDEIIEIVQKEPSGWWLA--LKNGAEGWVPATYVTE 1162
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 266 VCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYG--ERTRDGEAGWFPGAYSAEI 320
V ALY Y AA P+E+S +GD + V + +GW+ G D G FP + EI
Sbjct: 612 VSALYDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFVREI 668
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 266 VCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGE--RTRDGEAGWFPGAY 316
V ALY Y A P+E+S +GD + V R +GW+ GE + + G FP +
Sbjct: 871 VIALYDYQAQIPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNF 923
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 40.3 bits (90), Expect = 4e-04
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 262 DCPQVC-ALYAYAAAQPD-ELSLAEGDVVNVTRKT-AEG----WYYGERTRDGEAGWFPG 314
D + C A Y + + P E+SL +GD++ + KT +G W+ G R R GE GWFP
Sbjct: 222 DSLEFCKADYEFMSRDPGVEMSLKKGDIIAILSKTDTQGNPCEWWQG-RKRSGETGWFPS 280
Query: 315 AYSAEIA 321
Y + I+
Sbjct: 281 NYCSIIS 287
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 248 LPAAAPGEAVYAGWDCPQVCALYAYAAAQPDELSLAEGDVVNVTRKT--AEGWYYGERTR 305
+P P A A V ALY YAA +LS GD + V +T W+ G
Sbjct: 394 VPVPPPAPAPAAAPAAEHVVALYDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWWIGR--L 451
Query: 306 DGEAGWFPGAY 316
+G G FPG Y
Sbjct: 452 NGAQGQFPGNY 462
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 266 VCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYG--ERTRDGEAGWFPGAYSAEI 320
V ALYAY A P E+ L D + V + +GW+ G G G FP Y E+
Sbjct: 357 VRALYAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIEEL 413
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 265 QVCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSAEIASPH 324
+V ALY +AA + ELS +GD++ V + W+ G + G FP Y + P
Sbjct: 219 RVRALYDFAATEQGELSFKKGDIILVLESVYKDWWKG--SCKNAVGIFPVNYVQRVVEPT 276
Query: 325 V 325
+
Sbjct: 277 I 277
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 35.9 bits (79), Expect = 0.009
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 270 YAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPG 314
Y++ +EL L +GD++ V ++ EGW+ GE+ GE G F G
Sbjct: 430 YSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKL--GEDGVFTG 472
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 34.3 bits (75), Expect = 0.026
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 265 QVCALYAYAAAQPDELSLAEGDVVNVTRKTA--EGWYYGERTRDG-EAGWFPGAY 316
Q A+Y++A QP +LS +GD++++ ++ + W+ G R G G FP Y
Sbjct: 375 QARAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTG---RIGYREGIFPANY 426
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 33.5 bits (73), Expect = 0.046
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 268 ALYAYAAAQPDELSLAEGDVVNVT-RKTAEGWYYGERTRDGEAGWFPGAYSAEI 320
ALY Y A + E+S A+GD +V R+ + WY G G+ P ++ EI
Sbjct: 31 ALYDYTARKATEVSFAKGDFFHVIGRENDKAWYEVCNPAAGTRGFVPVSHFEEI 84
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 32.7 bits (71), Expect = 0.080
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 266 VCALYAYAAAQPDELSLAEGD---VVNVTRKTAEGWYYGERTRDGEAGWFPGAY 316
V AL+++ DEL L EG ++ + + +GW+ GE G G FP ++
Sbjct: 7 VIALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGE-DEQGNRGIFPASH 59
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 32.3 bits (70), Expect = 0.11
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 237 TEVSRWREALWLPAAAPGEAVYAGWDCPQVCALYAYAAAQPDELSLAEGDVVNVTRKTAE 296
+ V+ E L P + PG A + +V A+Y + +L G+V+ V
Sbjct: 117 SSVNSSTEKLPPPPSYPGPNT-AHKNVERVLAMYDFPGPDAGDLGFHAGEVIIVLEHVNN 175
Query: 297 GWYYGERTRDGEAGWFPGAYSAEIASPHVRAR 328
W+ GE +G+ G FP Y + V+A+
Sbjct: 176 DWWRGE--LNGKEGIFPSNYVRLLEDSAVKAQ 205
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 3 PMQRVTRLPLLMDAVLKNLSSEDEEYEACMHALATLNNYVQQCNEGARNTERVEEMYRL- 61
P+QR+ + PLL++ +LK S + E +A + Q NE R E + L
Sbjct: 357 PIQRICKYPLLLNQLLKGTPSGYQYEEELKQGMACVVRVANQVNETRRIHENRNAIIELE 416
Query: 62 ARVIEF 67
RVI++
Sbjct: 417 QRVIDW 422
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 31.1 bits (67), Expect = 0.25
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 266 VCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSAEIASPHV 325
V ALYA+ + +L EGD++ W+ G G FP + + P V
Sbjct: 11 VRALYAWPGEREGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNFVHCLDIPTV 70
Query: 326 R 326
R
Sbjct: 71 R 71
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.32
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 265 QVCALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAYSAEIASP 323
+V ALY Y ++ D+L G V++V WY G D + G++ + P
Sbjct: 7 RVVALYPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYV-DSDGNRKIGSFPKDFTEP 64
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 29.9 bits (64), Expect = 0.57
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 220 GSSALAERRVLMSCGSETEVSRWREALWLP 249
G +E RV +CG ET V RW+ +P
Sbjct: 471 GKGKQSEVRVFAACGRETRVGRWKTLRGIP 500
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 3 PMQRVTRLPLLMDAVLKNLSSEDEEYEACMHALATLNNYVQQCNEGARNTERVEEMYRLA 62
P R+ R PLL++AVLK + + + + + ++ + N + E ++ L
Sbjct: 763 PTTRLARYPLLLEAVLKYTDEGNPDKQDIPKVINIVRGFLSRLNVESGKAENKFNLFHLN 822
Query: 63 RVIEFPAG 70
+ + F G
Sbjct: 823 QQLVFKPG 830
>SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase
Leu1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 371
Score = 29.1 bits (62), Expect = 0.99
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 268 ALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGW 311
+L Y+ +P+ + EG V R+ G Y+GERT D +G+
Sbjct: 114 SLVKYSPLKPE---IVEGVDFCVVRELTGGCYFGERTEDNGSGY 154
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 3 PMQRVTRLPLLMDAVLKNLSSEDEEYEACMHALATLNNYVQQCNEGARNTE 53
P R+ R PLL+ VLK ++ + E + + ++ + N TE
Sbjct: 589 PTTRLARYPLLLSGVLKYTDKDNPDTENIPRVIEMIREFLTKLNYETGKTE 639
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 3 PMQRVTRLPLLMDAVLKNLSSEDEEYEACMHALATLNNYVQQCN 46
P QR+ R L +D +LK+ +++ A+ L ++C+
Sbjct: 612 PTQRLQRYTLELDTILKHTEQSSWDFQLITQAVKELRATCEECD 655
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 14 MDAVLKNLSSEDEEYEACMHALATLNNYVQQCNEGARNTERVEEMY 59
++ +++ L S ++C L LNNY+ C E +EE Y
Sbjct: 438 LNDLVEELGSCPRSSDSCRAILDILNNYIFSCPLFLVTPEELEEQY 483
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 268 ALYAYAAAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFPGAY 316
ALY + +EL G + + ++++GW G +G P +
Sbjct: 87 ALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGLVPETF 135
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 279 ELSLAEGDVVNVTRKTAEGWYYGERT-----RDGEAGWFPGAYSAEIASPHVRARNL 330
E+S+ E ++V + K + WY +R D E G P Y E A P + + L
Sbjct: 33 EISIVEDEIVCLLEKGEDDWYLVKRNVNSNDDDEEIGIVPSNYITE-AEPSTKMKAL 88
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 265 QVCALYAYA-AAQPDELSLAEGDVVNVTRKTAEGWYYGERTRDGEAGWFP 313
Q A+ Y ++ P L + GD + V +GW G + + GWFP
Sbjct: 4 QTTAISDYENSSNPSFLKFSAGDTIIVIEVLEDGWCDGICSE--KRGWFP 51
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,386,859
Number of Sequences: 5004
Number of extensions: 48644
Number of successful extensions: 132
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 106
Number of HSP's gapped (non-prelim): 29
length of query: 351
length of database: 2,362,478
effective HSP length: 73
effective length of query: 278
effective length of database: 1,997,186
effective search space: 555217708
effective search space used: 555217708
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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