Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002803-TA|BGIBMGA002803-PA|IPR000219|DH
(256 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 118 5e-27
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 118 5e-27
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 36 0.037
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 33 0.20
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 33 0.20
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 31 1.1
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 30 1.4
Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 30 1.4
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 30 1.9
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 30 1.9
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 30 1.9
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF043702-10|AAK21498.1| 130|Caenorhabditis elegans Hypothetical... 29 2.5
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 2.5
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 3.3
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 29 4.3
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 29 4.3
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 4.3
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 28 5.7
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80441-3|AAB37653.2| 262|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF077532-1|AAC26268.1| 301|Caenorhabditis elegans Hypothetical ... 28 7.5
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 9.9
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 27 9.9
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 27 9.9
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 27 9.9
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 9.9
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 9.9
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 118 bits (283), Expect = 5e-27
Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Query: 106 GPARTLWCESRRSSTPLCSVSSLAPAQKRLQEAKFELLTSEASYLNSLNVLESQFVAHPA 165
G R+LWCE + L K QEA FE++TSEASYL SLNVL + F+A P
Sbjct: 143 GSQRSLWCELPEVRAAGL-LEKLDDECKLRQEAYFEVITSEASYLRSLNVLITHFMASPQ 201
Query: 166 FRDPH----ILPRDDWEILFSTILPVRKCSQLLMNELEKCWQENILLQGICDIVRHHAEE 221
+L D + LFS I VR CS+ L+ +LE +EN++L ICDI+ H ++
Sbjct: 202 MLGSKSALSVLSDSDRKHLFSNIFAVRDCSERLLCDLETRLEENLILDDICDILSDHFDK 261
Query: 222 HFQVYVKYCENQTLMVKALQRLR-ERPAFATALKR 255
HF+VY+KYC NQ + L+RL+ E P F +A++R
Sbjct: 262 HFEVYIKYCSNQVYQDRTLRRLKTENPGFLSAVQR 296
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 118 bits (283), Expect = 5e-27
Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Query: 106 GPARTLWCESRRSSTPLCSVSSLAPAQKRLQEAKFELLTSEASYLNSLNVLESQFVAHPA 165
G R+LWCE + L K QEA FE++TSEASYL SLNVL + F+A P
Sbjct: 631 GSQRSLWCELPEVRAAGL-LEKLDDECKLRQEAYFEVITSEASYLRSLNVLITHFMASPQ 689
Query: 166 FRDPH----ILPRDDWEILFSTILPVRKCSQLLMNELEKCWQENILLQGICDIVRHHAEE 221
+L D + LFS I VR CS+ L+ +LE +EN++L ICDI+ H ++
Sbjct: 690 MLGSKSALSVLSDSDRKHLFSNIFAVRDCSERLLCDLETRLEENLILDDICDILSDHFDK 749
Query: 222 HFQVYVKYCENQTLMVKALQRLR-ERPAFATALKR 255
HF+VY+KYC NQ + L+RL+ E P F +A++R
Sbjct: 750 HFEVYIKYCSNQVYQDRTLRRLKTENPGFLSAVQR 784
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 35.5 bits (78), Expect = 0.037
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 135 LQEAKFELLTSEASYLNSLN-VLESQFVAHPAFRDPHILPRDDWEILFSTILPVRKCSQL 193
L ELL +E +Y+ LN V++ R+ + D LF I + ++
Sbjct: 224 LDRIAIELLDTERTYVEDLNAVIKGYMDFLVEDREKLKVTLDAISSLFGCIERIFAFNKQ 283
Query: 194 LMNELEKCWQENILLQGICDIVRHHAEEHFQVYVKYCENQTLMVKALQRLRERPAFATAL 253
L N+L+ + + + C + + F+ Y++YC N M+ L L+++P A AL
Sbjct: 284 LYNQLDAADLDCVKMSR-CFV---ESSGKFEDYIEYCTNYHRMMSTLYHLQQQPLVARAL 339
Query: 254 K 254
+
Sbjct: 340 Q 340
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 56 YQFYNAAKVESIYRETGDSDSDGYEAGVPGAQAPP-PEPARPSAMALVSPRGPART 110
+ F + E + R+ S G A A APP P P RP+A ++ SP P RT
Sbjct: 700 FAFARQTEKEDLMRQLQLSIVSGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRT 755
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 56 YQFYNAAKVESIYRETGDSDSDGYEAGVPGAQAPP-PEPARPSAMALVSPRGPART 110
+ F + E + R+ S G A A APP P P RP+A ++ SP P RT
Sbjct: 700 FAFARQTEKEDLMRQLQLSIVSGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRT 755
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 82 GVPGAQAPPPEPARPSAMALVSPRGPARTLWCESRRSSTPLCSVSSLAPAQKRLQEAKFE 141
G P + PP P +P + PR A ++ S R S S + A L + F+
Sbjct: 137 GPPKQGSEPPIP-KPPVIIFRVPRKHANSM--SSLRVSPGAIGPSGVVKAP--LSDPNFD 191
Query: 142 LLTSEASYLNSLNVLESQFV-AHPAFRDPHILPRDDWEILFSTILPVRKCSQLLM 195
T S ++ + + S F+ AH + ++P ++F T LPVRK L+
Sbjct: 192 FYTWHTSEADNHDAVYSLFMKAHKCY---DLIPTSSKLVVFDTHLPVRKAFYALV 243
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 78 GYEAGVPGAQAPPPEPARPSAMALVSPRGPARTL 111
G+ PG +AP P P RP + +PR P T+
Sbjct: 94 GWNTQAPGPRAPAPAPTRPQ-YGVPAPRAPQPTI 126
>Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical
protein T25B9.1 protein.
Length = 420
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 116 RRSSTPLCSVSSLAPAQKRLQEAKFELLTSEASYLNSLNVLESQFVAHPAFRDPHILPRD 175
R+ S P +SLAP+ F+LL +++S++ SL S F A IL D
Sbjct: 286 RQRSRPYLFSNSLAPSIVGSSIKVFDLLMNDSSFIGSLQTNVSHFRKSMAANGFTILGND 345
Query: 176 DWEILFSTILPVRKCSQLLMNELEK 200
+ +L K + + +EL K
Sbjct: 346 PTHPICPVLLGDAKLAATMADELLK 370
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 80 EAGVPGAQAPPPEPARPSAMALVSPRGP 107
+ G PGAQ PP E RP P GP
Sbjct: 215 QPGEPGAQGPPGEDGRPGNSGPQGPPGP 242
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 81 AGVPGAQAPPPEPARPSAMALVSPRGP 107
+G PG+Q PP P +P + P GP
Sbjct: 209 SGAPGSQGPPGAPGQPGSGNAPGPAGP 235
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 156 LESQFVAHPAFRDPHILPRDDWEILFSTILPVRKCSQLLMNELEKCWQENILLQGICDIV 215
L S + R +L DW +LF + P KC + + E+ K +E +L+
Sbjct: 815 LNSYIILQRNIRSWCVLRTWDWFLLFGKLRPQLKCGK-MAEEMIKMAEEQKVLEAEAKKA 873
Query: 216 RHHAEEHFQVYVKYCENQTLMVKALQ 241
+ + Y K ++ +++AL+
Sbjct: 874 ESARKSQEEAYAKLSAERSKLLEALE 899
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 156 LESQFVAHPAFRDPHILPRDDWEILFSTILPVRKCSQLLMNELEKCWQENILLQGICDIV 215
L S + R +L DW +LF + P KC + + E+ K +E +L+
Sbjct: 815 LNSYIILQRNIRSWCVLRTWDWFLLFGKLRPQLKCGK-MAEEMIKMAEEQKVLEAEAKKA 873
Query: 216 RHHAEEHFQVYVKYCENQTLMVKALQ 241
+ + Y K ++ +++AL+
Sbjct: 874 ESARKSQEEAYAKLSAERSKLLEALE 899
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 156 LESQFVAHPAFRDPHILPRDDWEILFSTILPVRKCSQLLMNELEKCWQENILLQGICDIV 215
L S + R +L DW +LF + P KC + + E+ K +E +L+
Sbjct: 815 LNSYIILQRNIRSWCVLRTWDWFLLFGKLRPQLKCGK-MAEEMIKMAEEQKVLEAEAKKA 873
Query: 216 RHHAEEHFQVYVKYCENQTLMVKALQ 241
+ + Y K ++ +++AL+
Sbjct: 874 ESARKSQEEAYAKLSAERSKLLEALE 899
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 54 PLYQFYNAAKVESIYRETGDSDSD-GYEAGVPGAQAPPPEPARPSAMALVSPRGPARTLW 112
PL F KVE + D D D G + PP PA PS L + P
Sbjct: 466 PLEMFKAPPKVEIEKEKEKDKDEDDGAQPSSAPVHTPPAPPAIPSPAKLPTAPPPVEKPV 525
Query: 113 CESRRSSTPLCS-VSSLAP 130
S S++PL S VSS AP
Sbjct: 526 TPS-PSASPLPSPVSSPAP 543
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 78 GYEAGVPGAQAPP-PEPARPSAMALVSPRGPART 110
G A A APP P P RP+A ++ SP P RT
Sbjct: 359 GTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRT 392
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 78 GYEAGVPGAQAPP-PEPARPSAMALVSPRGPART 110
G A A APP P P RP+A ++ SP P RT
Sbjct: 743 GTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRT 776
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 78 GYEAGVPGAQAPP-PEPARPSAMALVSPRGPART 110
G A A APP P P RP+A ++ SP P RT
Sbjct: 743 GTNAAQSPANAPPRPPPPRPAAPSVESPIPPPRT 776
>AF043702-10|AAK21498.1| 130|Caenorhabditis elegans Hypothetical
protein W03D8.3 protein.
Length = 130
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 77 DGYEAGVPGAQAPPPEPARPSAMALVSPRGPARTLWCESRRSSTPLCSVS---SLAPAQK 133
D YE P APPP +P+A V+PR P + + P SV+ + PAQK
Sbjct: 4 DAYEFLAPDLLAPPPPSQQPAA---VAPRAPRPAPGHPAPTNELPPVSVAKKFEVQPAQK 60
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRG 106
G+ DG E G PG PP EP P A + G
Sbjct: 163 GERGMDG-EPGPPGPTGPPGEPGLPGAQGITGQPG 196
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 84 PGAQAPPPEPARPSAMALVSPRGPARTLWCESRRSSTPL-CSVSSLAPAQKRLQEAKFEL 142
P A+ PPP PA + P P W + +R + + +V S K L+E
Sbjct: 714 PAARPPPPRPAPANKEKPKEPE-PEEDAWAQFKRMTEKVSTAVKSTESTLKNLEETSAAN 772
Query: 143 LTSEASYL 150
+ SYL
Sbjct: 773 DIKDESYL 780
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 81 AGVPGAQAPPPEPARPSAMALVSPRGP 107
+G PG Q PP P +P + P GP
Sbjct: 209 SGAPGPQGPPGAPGQPGSGNAPGPAGP 235
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Query: 81 AGVPGAQAPPPEPARPSAMALVSPRGPA 108
AG PG Q P P RP P GPA
Sbjct: 226 AGQPGRQGAPGNPGRPGERGPSGPCGPA 253
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 81 AGVPGAQAPPPEPARPSAMALVSPRGP 107
+G PG Q PP P +P + + P GP
Sbjct: 207 SGRPGPQGPPGAPGQPGSGSTPGPAGP 233
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGP 107
G DGY AG PG + P P P + P GP
Sbjct: 256 GMPGEDGY-AGTPGEKGWPGPPGAPGPGGMPGPNGP 290
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGP 107
G DGY AG PG + P P P + P GP
Sbjct: 256 GMPGEDGY-AGTPGEKGWPGPPGAPGPGGMPGPNGP 290
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGPA 108
GD S G E G PG PP EP + + L+ P G A
Sbjct: 138 GDHGSPG-EPGYPGPSGPPGEPGY-ATIGLIGPPGLA 172
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 152 SLNVLESQFVAHPAFRDPHILPR-DDWEILFSTILPVRKCSQLLMN 196
S +L +F P R HI D W ++ + ++P+ +CS +L +
Sbjct: 128 SCPILYEKFPRIPVKRYEHIYQLLDAWSLVVNQLVPISRCSMILQH 173
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 152 SLNVLESQFVAHPAFRDPHILPR-DDWEILFSTILPVRKCSQLLMN 196
S +L +F P R HI D W ++ + ++P+ +CS +L +
Sbjct: 128 SCPILYEKFPRIPVKRYEHIYQLLDAWSLVVNQLVPISRCSMILQH 173
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 134 RLQEAKFELLTSEASYLNSLNVLESQFVAHPAFRDPHILPRDDWEILFSTIL 185
R +E +FE L Y +S F A+ +++ PH++ +D +IL ++
Sbjct: 699 RDEEIEFETLRILEGYCVETGGGQSDFHANESYQQPHLIVAEDEKILMEEMI 750
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 88 APPPEPARPSAMALVSPRGPARTLWCES-RRSSTPLCSVSS-LAPAQKRLQEAKFELLTS 145
APPP P + A A V P PA S +S T L S +Q + F L S
Sbjct: 222 APPPAPVQDPAPAPVEPSDPAPPSKLPSPSKSCTDLAGGSQRFKTGPHPMQSSSFHNLKS 281
Query: 146 EASYLNS 152
E NS
Sbjct: 282 EFDGFNS 288
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 73 DSDSDGYEAG--VPGAQAPPPEPARPSAMALVSPRGPARTLWCESRRSSTPLCSVSS 127
D DG +G P A+ P EPA+P+A + SP PA+ S S P+ SS
Sbjct: 164 DFKDDGASSGGSAPAAEKAP-EPAKPAASSQPSP--PAQMYQAPSVPKSAPIPHSSS 217
>U80441-3|AAB37653.2| 262|Caenorhabditis elegans Hypothetical
protein F27C1.3 protein.
Length = 262
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 51 THEPLYQFYNAAKVESIYRETGDSDSDGYEAGVPGAQAPPPEPARPSAMA 100
TH+P YQ A +++ + G G G GA APP PA+ A A
Sbjct: 190 THDPNYQTL-AGLNNNVFDQKGGVGGGG--GGGNGAPAPPKAPAQHGAKA 236
>AF077532-1|AAC26268.1| 301|Caenorhabditis elegans Hypothetical
protein F40B1.1 protein.
Length = 301
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 180 LFSTILPVRKCSQLLMNELEKCWQENI 206
++ +P+RKC + L+NE EK ++ +
Sbjct: 230 MYDMSVPLRKCEEFLINESEKSMKDQL 256
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 84 PGAQAPPPEPARPSAMALVS-PRGPARTLWCESRRSSTPL 122
PG APPPEP+ P+ + V PR ++ + RS TPL
Sbjct: 95 PGYIAPPPEPSFPTLIDSVDVPRVNQQS--SNTYRSETPL 132
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGPA 108
G DG G PG P PA PS P GPA
Sbjct: 171 GPPGPDG-TPGEPGGPGPAGSPAGPSGPGPAGPPGPA 206
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 71 TGDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGPART 110
+GD DG E GVPG P + A P+GP T
Sbjct: 153 SGDVGEDG-EPGVPGNDGADGTPGKSGAPGGKGPQGPPGT 191
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRG 106
G S GY A A PPP P P A A VS G
Sbjct: 288 GSSGGGGYSAPA-AAPPPPPPPPPPPAPAPVSSGG 321
>Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRG 106
G S GY A A PPP P P A A VS G
Sbjct: 288 GSSGGGGYSAPA-AAPPPPPPPPPPPAPAPVSSGG 321
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 71 TGDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRG----------PARTLWCESRRSST 120
TG ++G+ VP PPP P P +P G + ++
Sbjct: 215 TGGGGNNGFFVPVP-VVIPPPPPPPPGPNCFTNPSGFLCCNVTLEKTMEDAYLAAKADGA 273
Query: 121 PLCSVSSLAPAQKRLQEAKF 140
LC+V +A A + E KF
Sbjct: 274 SLCNVQKMATAVQAQAEKKF 293
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 188 RKCSQLLMNELEKCWQENILLQGICDIVRHHAEEHFQVYVKYCENQTLMVKALQRLRERP 247
+K ++ MN ++ Q+ + + + DI HH F + Y EN L ++ Q LRE
Sbjct: 74 QKSIEVGMN-IQPLLQKTSIQELLHDISAHHMNRVFLLLNSYPENSNLKIE--QMLREET 130
Query: 248 AFATALK 254
+F K
Sbjct: 131 SFVARQK 137
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 64 VESIYRETGDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGPARTLWCESRRSSTPLC 123
V+SI+ T D D D E+G+ +++ P M + RG + LC
Sbjct: 955 VDSIFCSTNDEDYDTVESGI--SRSSFKSMYLPWIMYCIEKRGECVQEDKYDHEEAVTLC 1012
Query: 124 SVSSLAPAQKRLQEAKFELLTSEA-SYLNSLNVL 156
+ SL A++ L A F +S A S+L L+ L
Sbjct: 1013 FLLSLV-ARRSLGTASFNRHSSAAESFLYGLHSL 1045
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 72 GDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRG-PAR 109
GD+ DG +AG G Q PP P + P+G P R
Sbjct: 179 GDNGPDG-KAGANGMQGPPGMMGPPGRQGVSGPKGAPGR 216
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 61 AAKVESIYRETGDSDSDGYEAGVPGAQAPPPEPARPSAMALVSPRGPARTL 111
AA V+ I + + D G Q PP +P + ++P PA T+
Sbjct: 1234 AASVDEIQVKEEEEDQKEETVGSVERQEPPKKPVADDHKSAIAPLPPANTI 1284
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.133 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,879,517
Number of Sequences: 27539
Number of extensions: 245757
Number of successful extensions: 1521
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1476
Number of HSP's gapped (non-prelim): 69
length of query: 256
length of database: 12,573,161
effective HSP length: 80
effective length of query: 176
effective length of database: 10,370,041
effective search space: 1825127216
effective search space used: 1825127216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -