Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002802-TA|BGIBMGA002802-PA|undefined
(316 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17LB9 Cluster: Guanine nucleotide exchange factor; n=3... 36 1.4
UniRef50_P32494 Cluster: Transcriptional adapter 3; n=2; Sacchar... 36 1.4
UniRef50_UPI00006CE925 Cluster: hypothetical protein TTHERM_0056... 34 4.2
UniRef50_Q0ALS4 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q1XDM0 Cluster: Pyruvate dehydrogenase E1 component sub... 34 5.5
UniRef50_UPI00006CB821 Cluster: hypothetical protein TTHERM_0057... 33 7.3
UniRef50_Q1QVY2 Cluster: OmpA/MotB; n=2; Gammaproteobacteria|Rep... 33 7.3
UniRef50_A5AIQ2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A2F481 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A6RNG5 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 9.6
>UniRef50_Q17LB9 Cluster: Guanine nucleotide exchange factor; n=3;
Culicidae|Rep: Guanine nucleotide exchange factor -
Aedes aegypti (Yellowfever mosquito)
Length = 867
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 272 SFKSRFRRATSLAVDINDVPSALKITNSTFYLTDSMDGDSGFSN 315
S +S+ R++ +N + S+ + STFY+TDS+D DSG N
Sbjct: 132 SLRSKLRKSLQSDSSLN-IHSSFNASRSTFYVTDSLDVDSGIFN 174
>UniRef50_P32494 Cluster: Transcriptional adapter 3; n=2;
Saccharomyces cerevisiae|Rep: Transcriptional adapter 3
- Saccharomyces cerevisiae (Baker's yeast)
Length = 702
Score = 35.9 bits (79), Expect = 1.4
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 133 LTKIASAAQRTMKSIKR-NLTKRYSVAMDGKSFTKSSQNGTYEAPTKTKKTPIY----AN 187
L IA Q T++++++ +K A D K T S+ +G +E+ T T++T I +
Sbjct: 76 LGTIARGDQETIEALRKIRDSKNEKQANDEKQET-SNADGQHESSTATEETNIIDKGVQS 134
Query: 188 YEKPEIQNVYSNISFNDTKPVLNKAENPVKAEFQEELKYAVSEKRP 233
KP N S ND + + A+N K E E+ V +P
Sbjct: 135 PPKPPPSNEISGTIENDVESIKQAADNMAKEEINEDKDLQVHRDQP 180
>UniRef50_UPI00006CE925 Cluster: hypothetical protein TTHERM_00560060;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00560060 - Tetrahymena thermophila SB210
Length = 1960
Score = 34.3 bits (75), Expect = 4.2
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 141 QRTMKSIKRNLTKRYSVAMDGKSFTKSSQNGTYEAPTKTKKTPIYANYEKPEIQNVYSNI 200
Q +KS + K +S T SQNG Y+ K + +P E+ +NVY+N
Sbjct: 1395 QEDLKSAQNLNQKNWSTLQGMNMVTVESQNGGYDNIQKFQFSPQTLQTEQGIYENVYNN- 1453
Query: 201 SFNDTKPVLNKAENPVKAEFQEELKYAVSEKRPN 234
N K V K E F + S + N
Sbjct: 1454 --NSNKKVHEKKEENTNNGFDNVVSLEKSNSKSN 1485
>UniRef50_Q0ALS4 Cluster: Putative uncharacterized protein; n=1;
Maricaulis maris MCS10|Rep: Putative uncharacterized
protein - Maricaulis maris (strain MCS10)
Length = 269
Score = 34.3 bits (75), Expect = 4.2
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1 MKSPYYSRNDDTLQKLPLRRGFDETRVRLIDVLEQTCWLSIR--TVLSQENFEIQD-LIA 57
+K P YS + D K LR E + L D L ++S+R +S++ I D L+A
Sbjct: 147 LKLPIYSDDIDVTIKNWLRH--TEPAIALGDKLLDDRFMSVRYEDFVSKKGLSIADRLVA 204
Query: 58 YVECDSSDSSGHLYESLEPAPSQPPRAPVVPIEE 91
++ D E +E A P RAPV PIE+
Sbjct: 205 FLGVDGRPEIRDFLE-MERAQRTPYRAPVTPIEK 237
>UniRef50_Q1XDM0 Cluster: Pyruvate dehydrogenase E1 component
subunit alpha; n=52; cellular organisms|Rep: Pyruvate
dehydrogenase E1 component subunit alpha - Porphyra
yezoensis
Length = 346
Score = 33.9 bits (74), Expect = 5.5
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 209 LNKAENPVKAEFQEELKYAVSEKRPNISDV 238
LN+ +N VK E ++ +K+A+S PN+S++
Sbjct: 309 LNEIQNAVKTELEQAVKFAISSPEPNMSEL 338
>UniRef50_UPI00006CB821 Cluster: hypothetical protein TTHERM_00579140;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00579140 - Tetrahymena thermophila SB210
Length = 1393
Score = 33.5 bits (73), Expect = 7.3
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 129 GQYTLTKIASAAQRTMKSIKRNLTKRYSVAMDGKSFTKSSQNGTYEAPTKTK--KTPIYA 186
G ++ K+ S QR SIK N + S++ +SF + S N T + + +
Sbjct: 1266 GSFSPLKLDSIEQRRQLSIKNNENLQLSISKRNESFNRKSINSTQNITQQQNQYQQQQHQ 1325
Query: 187 NYEKPEIQNVYSNISFNDTKPVLNKAENPVK 217
Y++ +Q+ + FN+ P L K
Sbjct: 1326 QYQQQLVQSQQAGNIFNNITPQLRNINRQKK 1356
>UniRef50_Q1QVY2 Cluster: OmpA/MotB; n=2; Gammaproteobacteria|Rep:
OmpA/MotB - Chromohalobacter salexigens (strain DSM 3043
/ ATCC BAA-138 / NCIMB13768)
Length = 330
Score = 33.5 bits (73), Expect = 7.3
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 282 SLAVDINDVPSALKITNSTFYLTDSMDGDSGFSNW 316
+LA ++NDVP+A+ +T T L + G+ G+SNW
Sbjct: 176 ALAPELNDVPNAISLTGHTDDLRYA-GGEKGYSNW 209
>UniRef50_A5AIQ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 117
Score = 33.1 bits (72), Expect = 9.6
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 28 RLIDVLEQTCWLSIRTVLSQENFEIQDLIAYVECDSSDSSGHLYESLEPAPSQPPRAPVV 87
R I ++EQ CW ++ T+L E L Y CD++DS+ P P PP PV
Sbjct: 57 RAIRIIEQQCWPALLTLLGFTPQEEDILRGY--CDATDST--------PTPLPPPPHPVD 106
Query: 88 P 88
P
Sbjct: 107 P 107
>UniRef50_A2F481 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 376
Score = 33.1 bits (72), Expect = 9.6
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Query: 132 TLTKIASAAQRTMKSIKRNLTKRYSVAMDGKSFTKSSQNGTYEA-PTKTKK-------TP 183
T T +S+ +K K N K + +S TK+ N T E PT KK T
Sbjct: 62 TDTNTSSSTLSAVKEEKNN-NKIKEKEVQKESITKNPTNPTKEVKPTPNKKRKSIIKVTS 120
Query: 184 IYANYEKPEIQNVYS---------NISFNDTKPVLNKAENPVKAEFQEELKYAVSEKR 232
+Y E +I+ V S N+S + K N NP K+E Q+E +S+K+
Sbjct: 121 LYDASEDDDIEKVPSGHNETKEIHNVSHENNKNEENNTSNPKKSESQKEQSSNISKKQ 178
>UniRef50_A6RNG5 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 389
Score = 33.1 bits (72), Expect = 9.6
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 156 SVAMDGKSFTK--SSQNGTYEAPTKTKKTPIYAN-----YEKPEIQNVYSNISFNDTKPV 208
+VAM SF S Q G+ +A + Y +EKP +++ S F+ +KP
Sbjct: 7 NVAMSEASFQPRGSGQRGSNDAKQGLLQETCYEKSSEKVHEKPAKESLVSKFKFSKSKPD 66
Query: 209 LNKAENPVKAEFQEELKYAVSE 230
LN E + E ++E K + E
Sbjct: 67 LNTQEEKTEKEQEKESKKRIKE 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.312 0.127 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,933,409
Number of Sequences: 1657284
Number of extensions: 10612296
Number of successful extensions: 25438
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 25437
Number of HSP's gapped (non-prelim): 10
length of query: 316
length of database: 575,637,011
effective HSP length: 101
effective length of query: 215
effective length of database: 408,251,327
effective search space: 87774035305
effective search space used: 87774035305
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 72 (33.1 bits)
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