GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002802-TA|BGIBMGA002802-PA|undefined
         (316 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 150 NLTKRYSVAMDGKSFTKSSQNGTYEAPTKTKKTPIYANYEKPEI 193
           NL K   VA +G++ T         A        I A Y+ PEI
Sbjct: 653 NLLKELRVAFEGEAKTSGQPRLLLTAAVPASFEAIAAGYDVPEI 696


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 62 DSSDSSGHLYESLEPAPSQPPRAPVVP 88
          D+S    H Y+S +  P++    P+VP
Sbjct: 71 DTSQDLQHSYQSPQTQPARFYSTPIVP 97


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.127    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,238
Number of Sequences: 317
Number of extensions: 2344
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 316
length of database: 114,650
effective HSP length: 57
effective length of query: 259
effective length of database: 96,581
effective search space: 25014479
effective search space used: 25014479
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)