Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002802-TA|BGIBMGA002802-PA|undefined
(316 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2943|AAN09520.1| 1034|Drosophila melanogaster CG11940-P... 33 0.68
AE014298-2942|AAF49029.1| 1162|Drosophila melanogaster CG11940-P... 33 0.68
BT021299-1|AAX33447.1| 345|Drosophila melanogaster RE22786p pro... 31 2.1
AF181645-1|AAD55431.1| 938|Drosophila melanogaster BcDNA.GH1214... 31 2.1
AE014298-2003|AAN09580.1| 345|Drosophila melanogaster CG32603-P... 31 2.1
AE014134-185|AAF51432.1| 938|Drosophila melanogaster CG4341-PA ... 31 2.1
BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p pro... 30 3.6
AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-P... 30 3.6
M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination ... 29 6.3
AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p pro... 29 6.3
AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombinatio... 29 6.3
AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA ... 29 6.3
>AE014298-2943|AAN09520.1| 1034|Drosophila melanogaster CG11940-PB,
isoform B protein.
Length = 1034
Score = 32.7 bits (71), Expect = 0.68
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 59 VECDSSDSSGHLYESLEPAPSQPPRAPV 86
+ C SS S+G Y++ P P PPRA V
Sbjct: 843 LSCHSSSSAGSAYQTYAPGPMLPPRADV 870
>AE014298-2942|AAF49029.1| 1162|Drosophila melanogaster CG11940-PA,
isoform A protein.
Length = 1162
Score = 32.7 bits (71), Expect = 0.68
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 59 VECDSSDSSGHLYESLEPAPSQPPRAPV 86
+ C SS S+G Y++ P P PPRA V
Sbjct: 971 LSCHSSSSAGSAYQTYAPGPMLPPRADV 998
>BT021299-1|AAX33447.1| 345|Drosophila melanogaster RE22786p
protein.
Length = 345
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 151 LTKRYSVAMDGKSFTKSSQNGTYEAPT-KTKKTPIYANYEKPEIQNVYSNISFND-TKPV 208
+TK Y+ + K++T + TY AP T P + Y P + YS + + T PV
Sbjct: 248 VTKTYTAPVVTKTYTAPAVVKTYSAPAVSTYTAPAVSTYTAPVVAKTYSAPAVSTYTAPV 307
Query: 209 LNK 211
+ K
Sbjct: 308 VTK 310
>AF181645-1|AAD55431.1| 938|Drosophila melanogaster BcDNA.GH12144
protein.
Length = 938
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 53 QDLIAYVECDSSDSSGHLYESLEPAPSQPPRAP 85
Q+ + +C++++SSG++YE P P +AP
Sbjct: 407 QEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAP 439
>AE014298-2003|AAN09580.1| 345|Drosophila melanogaster CG32603-PA
protein.
Length = 345
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 151 LTKRYSVAMDGKSFTKSSQNGTYEAPT-KTKKTPIYANYEKPEIQNVYSNISFND-TKPV 208
+TK Y+ + K++T + TY AP T P + Y P + YS + + T PV
Sbjct: 248 VTKTYTAPVVTKTYTAPAVVKTYSAPAVSTYTAPAVSTYTAPVVAKTYSAPAVSTYTAPV 307
Query: 209 LNK 211
+ K
Sbjct: 308 VTK 310
>AE014134-185|AAF51432.1| 938|Drosophila melanogaster CG4341-PA
protein.
Length = 938
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 53 QDLIAYVECDSSDSSGHLYESLEPAPSQPPRAP 85
Q+ + +C++++SSG++YE P P +AP
Sbjct: 407 QEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAP 439
>BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p
protein.
Length = 1732
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 39 LSIRTVLSQENFEIQDLIAYVECDSSDSSG 68
+ +R VLS+E E ++L+ Y CD + SSG
Sbjct: 1 MEMREVLSREGREAKNLLVYQFCDETTSSG 30
>AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-PA
protein.
Length = 1732
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 39 LSIRTVLSQENFEIQDLIAYVECDSSDSSG 68
+ +R VLS+E E ++L+ Y CD + SSG
Sbjct: 1 MEMREVLSREGREAKNLLVYQFCDETTSSG 30
>M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination
repair protein protein.
Length = 679
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 204 DTKPVLNKAENPVKAEFQEELKYAVSEKRP 233
+TKP + + PVKAE E+++ A E +P
Sbjct: 344 ETKPAKGRKKAPVKAEDVEDIEEAAEESKP 373
>AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p
protein.
Length = 679
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 204 DTKPVLNKAENPVKAEFQEELKYAVSEKRP 233
+TKP + + PVKAE E+++ A E +P
Sbjct: 344 ETKPAKGRKKAPVKAEDVEDIEEAAEESKP 373
>AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombination
repair protein 1 protein.
Length = 679
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 204 DTKPVLNKAENPVKAEFQEELKYAVSEKRP 233
+TKP + + PVKAE E+++ A E +P
Sbjct: 344 ETKPAKGRKKAPVKAEDVEDIEEAAEESKP 373
>AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA
protein.
Length = 679
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 204 DTKPVLNKAENPVKAEFQEELKYAVSEKRP 233
+TKP + + PVKAE E+++ A E +P
Sbjct: 344 ETKPAKGRKKAPVKAEDVEDIEEAAEESKP 373
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.312 0.127 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,286,257
Number of Sequences: 52641
Number of extensions: 489231
Number of successful extensions: 1207
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1193
Number of HSP's gapped (non-prelim): 18
length of query: 316
length of database: 24,830,863
effective HSP length: 85
effective length of query: 231
effective length of database: 20,356,378
effective search space: 4702323318
effective search space used: 4702323318
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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