Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002801-TA|BGIBMGA002801-PA|undefined
(100 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27019| Best HMM Match : rve (HMM E-Value=6.6e-15) 29 0.49
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 29 0.86
SB_45113| Best HMM Match : CemA (HMM E-Value=6) 27 2.0
SB_35309| Best HMM Match : VWA (HMM E-Value=9.70007e-41) 27 2.0
SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.0
SB_49691| Best HMM Match : E-MAP-115 (HMM E-Value=4.7) 27 2.0
SB_33846| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.0
SB_50380| Best HMM Match : PMC2NT (HMM E-Value=2.4) 27 2.6
SB_21338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_9718| Best HMM Match : Metallothio_2 (HMM E-Value=1.3) 27 2.6
SB_7559| Best HMM Match : Metallothio_2 (HMM E-Value=2) 27 2.6
SB_39574| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_17224| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_2706| Best HMM Match : DUF770 (HMM E-Value=3) 27 2.6
SB_45890| Best HMM Match : TMP_2 (HMM E-Value=4.4) 27 3.5
SB_59289| Best HMM Match : Lectin_C (HMM E-Value=2.1e-05) 26 4.6
SB_32670| Best HMM Match : CIMR (HMM E-Value=0) 26 4.6
SB_48201| Best HMM Match : PID (HMM E-Value=2.6) 26 6.1
SB_2704| Best HMM Match : TP2 (HMM E-Value=6.9) 26 6.1
SB_50078| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_35620| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_29832| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41) 25 8.0
SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19) 25 8.0
SB_41312| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 25 8.0
SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52) 25 8.0
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
>SB_27019| Best HMM Match : rve (HMM E-Value=6.6e-15)
Length = 684
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAEC 82
AL H + G ASAD+ +H T A +C
Sbjct: 305 ALHIARHVNTAGTASADTRCQHETERFAQQC 335
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 28.7 bits (61), Expect = 0.86
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 11 RGVSRKWRFWYTHVLATVAHRK 32
RG+ R+ R W+ HVL+ +A R+
Sbjct: 75 RGIERRARKWFAHVLSDIAARE 96
>SB_45113| Best HMM Match : CemA (HMM E-Value=6)
Length = 363
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 3 GFDRLVAKRGVSRKWRFWYTHVLATVAHRKRP 34
G DR+V G++ +W W+T++ V++ P
Sbjct: 285 GLDRMVKALGLTMRWSPWFTYMEDLVSNGVAP 316
>SB_35309| Best HMM Match : VWA (HMM E-Value=9.70007e-41)
Length = 409
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 18 RFWYTHV-LATVAHRKRPALERDRSRWLALFGRELALRRGNHTDVCGNASADSESEHPTN 76
RF+ + L + H KRP+L R + ++ A RR + + D E+ +
Sbjct: 101 RFYIERIGLQSRGHHKRPSLSRADDFYEGVYPDANAYRRNGYNRLKEQKKDDEETTSKSC 160
Query: 77 SAAAECSYLSDVS 89
A+ +L D S
Sbjct: 161 PTKADLGFLIDAS 173
>SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H D G ASAD+ +H A + L + HS
Sbjct: 605 ALHVARHVDTAGTASADTRCQHELAVADSPVVCLPERQTHS 645
>SB_49691| Best HMM Match : E-MAP-115 (HMM E-Value=4.7)
Length = 170
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 54 RRGNHTDVCGNASADSESEHPTNSAAAE 81
RR NH V GN A+ S +P S A E
Sbjct: 5 RRENHEGVAGNKKANESSFYPLGSNADE 32
>SB_33846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H + G ASAD+ +H +A ++ L + HS
Sbjct: 156 ALYIARHVNTAGTASADTRCQHEVAAADSQVVCLPERQTHS 196
>SB_50380| Best HMM Match : PMC2NT (HMM E-Value=2.4)
Length = 362
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 3 GFDRLVAKRGVSRKWRFWYTHVLATVAHRKRP 34
G DR+ G + +W W+T++ V++R P
Sbjct: 285 GLDRMTKALGFTMRWSPWFTYMEDLVSNRVVP 316
>SB_21338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H + G ASAD+ +H +A + L + HS
Sbjct: 97 ALHIARHVNTAGTASADTRCQHEVAAADSPVVCLPERQTHS 137
>SB_9718| Best HMM Match : Metallothio_2 (HMM E-Value=1.3)
Length = 279
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 3 GFDRLVAKRGVSRKWRFWYTHVLATVAHRKRP 34
G DR+ G + +W W+T++ V++R P
Sbjct: 202 GLDRMTKALGFTMRWSPWFTYMEDLVSNRVVP 233
>SB_7559| Best HMM Match : Metallothio_2 (HMM E-Value=2)
Length = 532
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 3 GFDRLVAKRGVSRKWRFWYTHVLATVAHRKRP 34
G DR+ G + +W W+T++ V++R P
Sbjct: 455 GLDRMTKALGFTMRWSPWFTYMEDLVSNRVVP 486
>SB_39574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H + G ASAD+ +H +A + L + HS
Sbjct: 756 ALHIARHVNTAGTASADTRCQHEVAAADSPVVCLPERQTHS 796
>SB_17224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H + G ASAD+ +H +A + L + HS
Sbjct: 7 ALHIARHVNTAGTASADTRCQHEVAAADSPVVCLPERQTHS 47
>SB_2706| Best HMM Match : DUF770 (HMM E-Value=3)
Length = 279
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H + G ASAD+ +H +A + L + HS
Sbjct: 211 ALHIARHVNTAGTASADTRCQHEVAAADSPVVCLPERQTHS 251
>SB_45890| Best HMM Match : TMP_2 (HMM E-Value=4.4)
Length = 326
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 42 RWLALFGRELALRRGNHTDVCGNASADSESEHPTNSA 78
R +AL EL + R H D G ASAD+ S+ +A
Sbjct: 283 RLMALAAGELHIAR--HVDTAGTASADARSQREVAAA 317
>SB_59289| Best HMM Match : Lectin_C (HMM E-Value=2.1e-05)
Length = 769
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 61 VCGNASADSESEHPTNSAAAECSY 84
+C +S D ++ PTNS+A + +Y
Sbjct: 456 ICQRSSVDMAAKKPTNSSAEQSNY 479
>SB_32670| Best HMM Match : CIMR (HMM E-Value=0)
Length = 1441
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 39 DRSRWLALFGRELALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSD 87
D+ WLA+ G + + + +VCG S D+ + ++A C L D
Sbjct: 478 DQPNWLAIDGESGSSGKQFYINVCGKLSKDNRTSGCKPGSSA-CMILKD 525
>SB_48201| Best HMM Match : PID (HMM E-Value=2.6)
Length = 150
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 23 HVLATVAHRKRPALERDRSRWLALFGRELALRRGNHTDVC 62
H+L + +RPALE++ R + GR L+ G H ++C
Sbjct: 14 HLLECIYKWRRPALEQESCR-VRYLGRSLSASPGPH-EMC 51
>SB_2704| Best HMM Match : TP2 (HMM E-Value=6.9)
Length = 351
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 53 LRRGNHTDVCGNASADSESEH 73
L H D G ASAD+ S+H
Sbjct: 157 LHIARHVDTAGTASADARSQH 177
>SB_50078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHS 92
AL H + G ASAD+ +H A + L + HS
Sbjct: 343 ALHVARHVNTAGTASADTRCQHELAVADSPVVCLPEQQTHS 383
>SB_35620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 3 GFDRLVAKRGVSRKWRFWYTHVLATVAHRKRP 34
G DR+V G + +W W++++ V++ P
Sbjct: 194 GLDRVVKALGFTMRWSPWFSYMEEVVSNGVTP 225
>SB_29832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 11 RGVSRKWRFWYTHVLATVAHRKRP-ALERDRSRWLALF 47
+ ++R+WR++ T +A V + RP A R S L ++
Sbjct: 21 KSLARRWRYFKTKTIALVTNGLRPQAFIRQTSSVLVVY 58
>SB_9088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 52 ALRRGNHTDVCGNASADSESEH 73
AL H D G ASAD+ +H
Sbjct: 250 ALHVARHVDTAGTASADTRCQH 271
>SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41)
Length = 376
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 64 NASADSESEHPTNSAAAECSYLSDVSVHSVFC 95
N S + ++ PT+ + +CSYL + V C
Sbjct: 24 NQSINQTTDRPTDRSIDQCSYLVSIPVPGGAC 55
>SB_48686| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 722
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 52 ALRRGNHTDVCGNASADSESEH 73
AL H D G ASAD+ +H
Sbjct: 250 ALHVARHVDTAGTASADTRCQH 271
>SB_41312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 3 GFDRLVAKRGVSRKWRFWYTHVLATVAHRKRP 34
G DR+V G + +W W++++ V++ P
Sbjct: 280 GLDRMVKALGFTMRWSPWFSYMEELVSNGVTP 311
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 52 ALRRGNHTDVCGNASADSESEHPTNSAAAECSYLSDVSVHSVFC 95
AL H + G ASAD+ +H A V VH C
Sbjct: 1907 ALHVARHVNTAGTASADTRCQHEVAVADPPLVCPETVDVHLKAC 1950
>SB_35734| Best HMM Match : Extensin_2 (HMM E-Value=0.52)
Length = 460
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 22 THV-LATVAHRKRPALERDRSRWLALFGRELALRRGNHTDVCGNASADSESEHP 74
TH L ++H+ P +R++ RW+ GR H D G A +ES P
Sbjct: 69 THYRLDYISHKYAPPKKREKDRWIKPDGRVEDESTYKH-DYPGRMVAPAESAKP 121
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 40 RSRWLALFGRELALRRGNHTDVCGNASADSESEHPTNSA 78
R R +AL L + R H D G ASAD+ S+ +A
Sbjct: 2056 RGRLMALAAWALHIAR--HVDTAGTASADARSKRDVAAA 2092
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.130 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,386,999
Number of Sequences: 59808
Number of extensions: 115405
Number of successful extensions: 405
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 382
Number of HSP's gapped (non-prelim): 29
length of query: 100
length of database: 16,821,457
effective HSP length: 71
effective length of query: 29
effective length of database: 12,575,089
effective search space: 364677581
effective search space used: 364677581
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 53 (25.4 bits)
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