GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002801-TA|BGIBMGA002801-PA|undefined
         (100 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M86826-1|AAA36047.1|  605|Homo sapiens insulin-like growth facto...    28   4.0  
BC025681-1|AAH25681.1|  605|Homo sapiens insulin-like growth fac...    28   4.0  
AL031724-2|CAC36078.1|  605|Homo sapiens C447E6.2 (insulin-like ...    28   4.0  
AF192554-1|AAF06774.1|  605|Homo sapiens acid-labile subunit pro...    28   4.0  
S45570-1|AAB19418.1|  343|Homo sapiens D-1 antigen protein.            27   9.3  

>M86826-1|AAA36047.1|  605|Homo sapiens insulin-like growth factor
          binding protein complex protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 70 ESEHPTNSAAAECSYLSDVSVHSVFCAMK 98
          E+E P   AA  CSY  D    SVFC+ +
Sbjct: 35 EAEGPACPAACVCSYDDDADELSVFCSSR 63


>BC025681-1|AAH25681.1|  605|Homo sapiens insulin-like growth
          factor binding protein, acid labile subunit protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 70 ESEHPTNSAAAECSYLSDVSVHSVFCAMK 98
          E+E P   AA  CSY  D    SVFC+ +
Sbjct: 35 EAEGPACPAACVCSYDDDADELSVFCSSR 63


>AL031724-2|CAC36078.1|  605|Homo sapiens C447E6.2 (insulin-like
          growth factor binding protein, acid labile subunit)
          protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 70 ESEHPTNSAAAECSYLSDVSVHSVFCAMK 98
          E+E P   AA  CSY  D    SVFC+ +
Sbjct: 35 EAEGPACPAACVCSYDDDADELSVFCSSR 63


>AF192554-1|AAF06774.1|  605|Homo sapiens acid-labile subunit
          protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 70 ESEHPTNSAAAECSYLSDVSVHSVFCAMK 98
          E+E P   AA  CSY  D    SVFC+ +
Sbjct: 35 EAEGPACPAACVCSYDDDADELSVFCSSR 63


>S45570-1|AAB19418.1|  343|Homo sapiens D-1 antigen protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 7   LVAKRG-VSRKWRFWY--THVL-ATVAHRKRPALERDRSRWLALFGRELALRRGNHTDVC 62
           LVA+   V+R WR W   T  + A  AH +   LER++  W      +LA + G   +V 
Sbjct: 84  LVAEAANVARAWRVWRDATQAIDAAKAHERELQLEREKLAWQLAELDKLAPQPGEWEEVS 143

Query: 63  GNASADSESEHPTNSAAAECSYLSD 87
                 S S +           LS+
Sbjct: 144 AEHKRLSHSANLIEGVRGALDALSE 168


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.130    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,068,799
Number of Sequences: 224733
Number of extensions: 451849
Number of successful extensions: 1014
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1010
Number of HSP's gapped (non-prelim): 5
length of query: 100
length of database: 73,234,838
effective HSP length: 77
effective length of query: 23
effective length of database: 55,930,397
effective search space: 1286399131
effective search space used: 1286399131
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 57 (27.1 bits)