GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002801-TA|BGIBMGA002801-PA|undefined
         (100 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   0.31 
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   0.41 
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   0.94 
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   2.9  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   2.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   3.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   5.0  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    20   6.6  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.31
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 71  SEHPTNSAAAECSYLSDVSVH 91
           +E+  N    ECS +SD +VH
Sbjct: 93  NENEINQLITECSAISDTNVH 113


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 0.41
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 56  GNHTDVCGNASADSE-SEHPTNSAAAECSYLSDVSVH 91
           GN  +V     A+    E+  N    ECS +SD  +H
Sbjct: 77  GNFNEVVVREIAEIYLDENEVNKLITECSAISDADIH 113


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 0.94
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 72  EHPTNSAAAECSYLSDVSVH 91
           ++ T+    ECS +SD +VH
Sbjct: 94  DNETDQLIVECSPISDANVH 113


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 72  EHPTNSAAAECSYLSDVSVHSVF 94
           E+      AECS +SD +++  F
Sbjct: 94  ENVIKKLVAECSVISDANIYIRF 116


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 72  EHPTNSAAAECSYLSDVSVHSVF 94
           E+      AECS +SD +++  F
Sbjct: 94  ENVIKKLVAECSVISDANIYIRF 116


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 12  GVSRKWRFWYTHVLATVAHRKRPALERDRSRWLALFGRELAL 53
           G+  +W      V AT+   ++   E+DR   +    +++AL
Sbjct: 385 GLEAQWSRVLGRVHATIERNEKRLAEQDRRERMEFDWKQVAL 426


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 17  WRFWYTHVLATVAHRKRPALERDRSRWLAL 46
           W+    H+LA +  +      RD   WL L
Sbjct: 109 WQLSTAHLLAQLFLKSTEVTPRDGLGWLLL 138


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 21  YTHVLATVAHRKRPALERDRSR 42
           Y     T   R R  +ER+RSR
Sbjct: 289 YRKYRETSKERSRDRIERERSR 310


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.130    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,049
Number of Sequences: 429
Number of extensions: 1343
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 100
length of database: 140,377
effective HSP length: 49
effective length of query: 51
effective length of database: 119,356
effective search space:  6087156
effective search space used:  6087156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.6 bits)
S2: 38 (19.4 bits)