Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002800-TA|BGIBMGA002800-PA|undefined
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.086
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 34 0.086
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 33 0.11
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 31 0.61
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 31 0.80
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 30 1.4
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 29 1.9
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 29 1.9
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 29 2.4
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 29 2.4
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 29 3.2
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 29 3.2
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 29 3.2
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 3.2
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 28 4.3
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 4.3
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 27 7.5
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 27 7.5
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 27 7.5
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 27 7.5
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 27 7.5
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 7.5
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 27 7.5
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 27 7.5
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 27 7.5
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 27 7.5
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 27 7.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 7.5
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 27 7.5
SPCC338.04 |cid2||caffeine induced death protein Cid2|Schizosacc... 27 9.9
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 9.9
SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon... 27 9.9
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 27 9.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 9.9
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 27 9.9
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 33.9 bits (74), Expect = 0.086
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 17/211 (8%)
Query: 7 KELIIISDDAKQHGTVKA--LLRNFRVTEKEMAIKENQNDTNKCVYSVPITPAIQTARTK 64
KE+ + D V A ++N T KE E+ + +K S P A TK
Sbjct: 198 KEIQVKEDGTTSSVAVNAETAVQNVNGTIKESQGTESISFASKN-NSAPSADANNGNMTK 256
Query: 65 SISEAKKAFLNATVSPNAP--PTKPDKRIEPTVHYAQLDIITKSEDTRSTGGGHDLKT-- 120
+S+ +KAFLN +PNA ++ D+ E T+ A SE T+ + KT
Sbjct: 257 LVSK-EKAFLNTVTTPNADLIISEEDELTEMTLRTA-----NGSEPTKKSNRSEQSKTVA 310
Query: 121 SSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFKIKTAGTFHRRPPIAAKTVTVATSNVS 180
+++V SK + A KR I P + + T T IA +V SN+S
Sbjct: 311 NTNVGSKNGTTPRSFAQKSSKR-IKPTEGSANLNTVTELT-GIGSRIAMNGSSVKASNIS 368
Query: 181 ELTHKFNLLNQPHSSPKHSKLAKTIEGLQTA 211
T K + +P + + S A +Q+A
Sbjct: 369 --TEKSKTIAKPKPAKELSPQATLNSPIQSA 397
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 33.9 bits (74), Expect = 0.086
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 293 YHDSNEHQNGSDSVDGLAAKSVINEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKK 352
Y S+ H N S +G+A K I P+KD KA G SV + E + N Q+ N++
Sbjct: 171 YSISSNHDNESTLTEGIALKE-IESPDKDRKADGIVNLSVTQ--EEDDNHQSFNSSLTPS 227
Query: 353 QP 354
QP
Sbjct: 228 QP 229
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 88 DKRIEPTVHYAQLDIITKS--EDTRSTGGGHDLKTSSDVKSKETPNEATHAGSHVKRKID 145
D+ IE Y+QLD T +DT S G DL+ SSD+ + + S R D
Sbjct: 1698 DQDIEYNEFYSQLDTSTSDIFQDT-SVDGFPDLQVSSDINVRNDRLSSFVMSSEDLRSSD 1756
Query: 146 PNQRKVSFKIKTAGTFHRRPPI 167
+ ++T + H R PI
Sbjct: 1757 GHPENSDSVLETISSVHHRSPI 1778
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 660 YDTIKHGDGSLSHCYESIPNSPSMVKLRNNLKKQLA 695
Y + +HG GS S + IP S S +RNN +L+
Sbjct: 1080 YCSAEHGPGSTSKVFSRIPYSASSTVIRNNSSHELS 1115
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 146 PNQRKVSFKIKTAGTFHRRPPIAAKTVTVATSNVSELTHKFNLLNQPHSSPKHSKL 201
P + + K + + H P + + A N+S+L F ++N P SP S+L
Sbjct: 225 PKEVSLMGKANSNRSGHSHQPQSTQFSPPANDNISKLPSSFTIVNDPLKSPSSSRL 280
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 12 ISDDAKQHGTVKALLRNFRVTEKEMAIKENQNDTNKCVYSVPITPAIQTARTKSISEAKK 71
+++ + Q V LR TEKE +E+ N+ N V + P+ A +K E KK
Sbjct: 199 LANKSSQEEGVDKQLRVVEATEKEH--EEDGNEENVTV-TKPVEVATDQVESK---EVKK 252
Query: 72 AFLNATVSPNAPP 84
++ T P APP
Sbjct: 253 KEVSETTEPTAPP 265
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 39 KENQNDTNKCVYSVP-ITPAIQTARTKSISEAKKAFLNATVSPNAPPTKPDKRIEPTV 95
K++ + + + S+P ++PA + S+S + + + PN P TKPD + P V
Sbjct: 961 KQSFDKKSSLIDSIPALSPAPSSLARSSVSSQRSSTSIIPIKPNKP-TKPDHLVAPRV 1017
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 427 RKKYKTNYIHTEKLPLKNMDFESDLVEAYNKEILVGYT 464
R ++ Y++ +LP+K+M+F+ DL E+ E+ + T
Sbjct: 170 RLEFDQEYMNEAELPIKDMNFDDDLHESAKHEMQLKLT 207
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 29.1 bits (62), Expect = 2.4
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 120 TSSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFK----IKTAGTFHRRPPIA----AKT 171
T+S +S E H SH Q ++S + TA FH RPPIA A+
Sbjct: 13 TNSISQSASAHPELYHTTSHESVSTYQLQSQLSHSATSNLSTAANFHTRPPIANDENAQN 72
Query: 172 V-TVATSNVSELTHKFNLLN 190
+ TV +S+ SEL+ K NL++
Sbjct: 73 LSTVNSSHSSELS-KANLVD 91
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 18/167 (10%)
Query: 41 NQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVSPNAPPTKPDKRIEPTVHYAQL 100
+Q T+K + S IT + K+ + N T+ A + E A +
Sbjct: 762 DQQKTSKALPSTGITKLSENDNEKAEESNETKGFNTTI---AKQNDKSSKSEGKASVANM 818
Query: 101 DIITKSEDTRSTGGGHDLKT-----SSDV------KSKETPNEATH---AGSHVKRKIDP 146
+ KS + ++ LK+ S+D K ETP + + K+ +
Sbjct: 819 SALNKSTNNETSDSKPSLKSPLFNFSADAPTFTFNKPSETPPFSFNKPLVEKESKQDVSD 878
Query: 147 NQRKVSFKIKTAGTFHRRPPIAAKTVTVATSNVSELTHKFNLLNQPH 193
+ F K G ++ P T +A SN+SE + + L+ QP+
Sbjct: 879 TSDRSPFSFKAFGIDSKKSPTPEPT-EMAESNISEESEGWKLIEQPN 924
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 642 TYSDRHSFISDYIESENIYDTIKHG-DGSLSHCYESIPNSPSMVKLRNNLKKQLASAVQK 700
T D F + + S + D I +G D H S+P P++ + L + + + +
Sbjct: 407 TNVDVRKFFAKSMRSHPLVDDIYNGFDVDKKHQSSSVPTLPNLTNISRVLSNKTSKSAKP 466
Query: 701 RLSFDTVSNISQSTLSSE 718
+ S T QSTL+ E
Sbjct: 467 KRSERTGLLSHQSTLAPE 484
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/50 (22%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 652 DYIESENIYDTIKHGDGSLSHCYESIPNSPSMVKLRNNLKKQLASAVQKR 701
D++ N+Y K G+G+ C+ + +++ +N++KQL ++++
Sbjct: 560 DHLTLLNVYHAYKSGEGTADWCWNHFLSHRALIS-ADNVRKQLRRTMERQ 608
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 292 KYHDSNEHQNGSDSVDGLAAKSVINEPEKDIKATGNNVKS 331
K H++++ GS+SVD A+++V +PE + T + ++
Sbjct: 288 KDHETSQAPLGSESVDTQASENVTTKPEPPVPFTSSEYRN 327
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 401 NETPRKTQAANPDSTLVPK-KKELIYDRKKYKTNYIHTEKLPLKNMDFESDLVEAYNKE 458
N+ K +A D+T K KK+L Y KK + NY T+K+ + M ++ A +KE
Sbjct: 426 NDMKIKDEAWQDDTTNFKKRKKDLPYLTKKARKNYKETKKI-TQEMKEADAVITAQDKE 483
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 175 ATSNVSELTHKFNLLNQPHSSPKHSKLAKTIEGLQTARRXXXXXXXXXXXXXXXXX-IKI 233
A S+ S +H QP S+P H+ + E LQ R ++
Sbjct: 546 AISSHSSESHSKRTTQQPKSTPNHTNIKVKSERLQHVRMAQQKAEQLDEERSRLREPVQQ 605
Query: 234 VVRQKRGSKKRNHRKRCSSMDSI 256
+V + + K+ N R +S+D+I
Sbjct: 606 IVNKWKEGKESNLRALLASLDTI 628
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 398 SNSNETPR---KTQAANPDSTLVP----KKKELIYDRKKYKTNYIHTEKLPLKNMDFESD 450
SNSN + + K+ P S+ +P K KE DRK ++ + T+ +P KN S
Sbjct: 14 SNSNSSSKLNAKSPNFIPSSSNIPRSSAKTKEHSADRKPHRNSEKKTQGMPRKNQQLASS 73
Query: 451 LVEAYNKEIL 460
+ NK+ L
Sbjct: 74 ERKTKNKKRL 83
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 27.5 bits (58), Expect = 7.5
Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 269 IQVIRSKSDGIKAPKYQSSKKKLKYHDSNEHQNGSDSVDGLAAKSVIN-EPEKDIKATGN 327
++ ++ + G+ P + + ++K K + + S KSVI E K +
Sbjct: 266 LKTLKKRLRGVLPPSFLTLQEKKKLENRGVKKKTS------LHKSVIEGEKIKGVARRKL 319
Query: 328 NVKSVIKKFECEINAQTINTNTIKKQPDPTKSXXXXXXXXXXXXXXXXXXLTKNIVVKDG 387
+ +S K E+ + +++ P PT L +++V +
Sbjct: 320 HPRSTAK-LSSELGNEISDSDNSISTPTPTDDSRFDTSEFLDSISRDNGWLKEDVVDQLW 378
Query: 388 IPK--IKTIRPISN-SNETPRKTQ-AANPDSTLVPKKKELIYDRKKYKTNYIHTEKLP 441
+PK + ++ S+ ++E P + AAN ST +P + KK + Y+ EKLP
Sbjct: 379 LPKRSLSALKKSSSLTSENPFQLNVAANAVST-IPVYRTTKTKMKKNRFKYVEVEKLP 435
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 474 EDDYEVLEPRESENIVVIPVKQVDMTSKMNCPLPEIP 510
ED E+ E ++ ++ + KQ+ + + N P P +P
Sbjct: 847 EDMLEMQERARNQKLMGVYEKQIQLAKRFNLPTPPVP 883
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 417 VPKKKEL--IYDRKKYKTNYIHTEKLP--LKNMDFESDLVEAYNKEILVGYTPKPQKEPV 472
+ K+ EL IY K T +TEKLP +K ++FE +L + + + Y P K
Sbjct: 368 IVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQA 427
Query: 473 IEDD 476
+ D+
Sbjct: 428 MNDE 431
>SPCC338.04 |cid2||caffeine induced death protein
Cid2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 167
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 420 KKELIYDRKKYKTNYIHTEKLPLKNMDFESDLVEAYNKEILVGYTPKPQKEPVIEDDYEV 479
+ +L DR K+ ++LP + S+ ++ Y KE+ V +P + + V++ + V
Sbjct: 79 RSQLDQDRNTSKSPLKSQQQLPSSSTTQVSERLDPYAKEVQVQLSPPEEVQIVLQSELSV 138
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 27.1 bits (57), Expect = 9.9
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 31 VTEKEMAIKENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVSPNAPPTKPDKR 90
V E+E++ + N + PITP + + +A L + +SP PP
Sbjct: 31 VLEQELSTPKQVNQARP-KFPSPITPTLPEMHLPVGNSKFQAVLPSLISPTLPPGFGMAS 89
Query: 91 IEPTVHYAQLDIITKSEDTRSTGGGHDLKTSSDV 124
+ A+ D+ D ST LK SS+V
Sbjct: 90 DDSEASLAENDLHPLDND--STRTSKTLKNSSEV 121
>SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 121 SSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFKIKTAGTFHRRPPIAAKTVTVATSNVS 180
S DV S NE H KR+ D ++ ++ A FHR +V V S
Sbjct: 127 SGDVVSNVPLNEVLK--EHRKRREDDKNAIMTMVVREASPFHRTRARTESSVFVIDKKTS 184
Query: 181 ELTH 184
+ H
Sbjct: 185 QCVH 188
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 27.1 bits (57), Expect = 9.9
Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 60 TARTKSISEAKKAFLNATVSPNAPPTKPDKRIEPTVHYAQLDIITKS-EDTRSTGGGHDL 118
T S+ + + N T P P + A+ S + +S G
Sbjct: 183 TLNISSVKQDRITEANPTCEKRKPSRSPSPMLSKKKSVARASENEPSAKQNKSFSGNDSH 242
Query: 119 KTSSDVKSKETPNEATHAGSHV----KRKIDPNQRKVSFKIKTAGTFHRRPPIAAKTVTV 174
K+ +D++ KE A +HV R+ +QR + +T R P+
Sbjct: 243 KSLTDIRDKENGETEVSAKNHVPHRSSRRRRRHQRLIPIIYETLEQMDLRKPVLVNAEVQ 302
Query: 175 ATSN 178
SN
Sbjct: 303 TDSN 306
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 93 PTVHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAGSH--VKRKIDPNQRK 150
P+V + IIT++E + +T G + S + + + + T+ + K D +Q+
Sbjct: 200 PSVEQSTPSIITQTESSTTTEGSSVASSESTIANSDQSSFITYESTQNPTANKTDASQQS 259
Query: 151 VSFKIKTAGTFHRRPPIAAKTVTVATSNVSELTH 184
+A + + +T T A SE T+
Sbjct: 260 TESTSSSASAYSYITTL--QTATTAQQTTSENTY 291
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 435 IHTEKLPLKNMDFESDLVEAYNKEILVGYTPKPQKEPVIEDDYEVLEPRESENIVVIPVK 494
+H+++ L + D S L N E L G+ P+ + +E ++ + +
Sbjct: 51 VHSKRTVLTSADISSAL-RTLNVEPLYGFN---NSRPL--EFHEAAVGAGQNSLYYLDDE 104
Query: 495 QVDMTSKMNCPLPEIPK 511
+VD +N PLP++P+
Sbjct: 105 EVDFEKIINAPLPKVPR 121
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,235,076
Number of Sequences: 5004
Number of extensions: 135704
Number of successful extensions: 431
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 419
Number of HSP's gapped (non-prelim): 44
length of query: 774
length of database: 2,362,478
effective HSP length: 78
effective length of query: 696
effective length of database: 1,972,166
effective search space: 1372627536
effective search space used: 1372627536
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
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