Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002800-TA|BGIBMGA002800-PA|undefined
(774 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 36 0.082
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 36 0.11
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 33 0.58
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 33 0.58
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 32 1.3
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 32 1.8
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 32 1.8
Z93785-7|CAB07863.1| 107|Caenorhabditis elegans Hypothetical pr... 31 3.1
Z92803-12|CAB07248.1| 107|Caenorhabditis elegans Hypothetical p... 31 3.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 3.1
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 31 3.1
U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical pr... 31 4.1
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 31 4.1
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 31 4.1
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 30 5.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 5.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 5.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 5.4
Z49125-2|CAA88935.1| 333|Caenorhabditis elegans Hypothetical pr... 30 7.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 7.1
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 30 7.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 7.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 7.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 7.1
Z75710-2|CAB00024.1| 741|Caenorhabditis elegans Hypothetical pr... 29 9.4
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 29 9.4
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 36.3 bits (80), Expect = 0.082
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 23/158 (14%)
Query: 53 PITPAIQTARTKSISEAKKAFLNATVSPNAPPTKPDKRI-EPTVHYAQLD-----IITKS 106
P IQ +T+ I+ ++K+ + ++ PT P +P+ A L + +KS
Sbjct: 353 PAASKIQEKKTEVIARSQKSEASTKIAQKPSPTNPTVNFKQPSQKPADLTPKPITLASKS 412
Query: 107 EDTRSTGGGHDLKTS------------SDVKSKETPNEATHAGSHVKRKIDPNQRKVSFK 154
TRS+ + T D +KE P E A SH + K+ P ++K +
Sbjct: 413 PITRSSEVSTEPSTKPKRAPIVWDDKPKDSTAKELPKELPKAKSHFEFKVKPIEKKDASP 472
Query: 155 IKTAGTFHRRPP-----IAAKTVTVATSNVSELTHKFN 187
KT T PP + K V TS +LT N
Sbjct: 473 PKTTSTSSASPPNPDPAMKQKYKFVPTSKKQKLTETKN 510
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 35.9 bits (79), Expect = 0.11
Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 6/168 (3%)
Query: 258 KLIITDKESTKIQVIRSKSDGIKAPKYQSSKKKLKYHDSNEHQNGS---DSVDGLAAKSV 314
KL +TDK I++++ + K+ K + K + H+SN +GS + KS
Sbjct: 75 KLKVTDKTEL-IELLQKQIKKNKSQKSKKRSKTVSDHESNHDSDGSYGTPKTSKKSKKSA 133
Query: 315 INEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKKQPDPTKSXXXXXXXXXXXXXXX 374
NE K K+ +K +E ++ + N KK +
Sbjct: 134 KNETPVSSKVPKVPTKAALKSYEATVSG-PVAPNNAKKAAMEVRDTRRNWLDEESSDDEA 192
Query: 375 XXXLTKNIVVKDGIPKIKTIRPISNSNETPRKTQAANPDSTLVPKKKE 422
+ V K K+K ++ + E P K + P V KK+
Sbjct: 193 ETTAPLSDVEKIA-SKVKVVKAVEEKAEEPVKRPSTPPKPREVVIKKD 239
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 33.5 bits (73), Expect = 0.58
Identities = 48/273 (17%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 36 MAIKENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVSPNAPPTK-PDKRIEPT 94
+ + E+++ + + A Q + A+K PP K P K+ + +
Sbjct: 3 VGVSESEDSDGHVIEDEDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKAS 62
Query: 95 VHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFK 154
++ D + E R + + S+ +S E+ E S K+K+D +++ S K
Sbjct: 63 S--SEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKK 120
Query: 155 IKTAGTFHRRPPIAAKTVTVATSNVSELTHKFNLLNQPHSSPKHSKLAKTIEGLQTARRX 214
+T + + + S+ T K S + K+ K+ + + + +
Sbjct: 121 KRTTSSSEDEDSDEEREQK--SKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKK 178
Query: 215 XXXXXXXXXXXXXXXXIKIVVRQKRGSKKRNHRKRCSSMDSIDKLIITDKESTKIQVIRS 274
K + K+G KK+ + S + ++ + K+S K+ S
Sbjct: 179 RAETSEESDEDE-----KPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKES 233
Query: 275 KSDGIKAPKYQSSKKKLKYHDSNEHQNGSDSVD 307
+S+ +AP+ + ++K+ + S+E + S+ D
Sbjct: 234 ESED-EAPEKKKTEKRKRSKTSSEESSESEKSD 265
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 33.5 bits (73), Expect = 0.58
Identities = 48/273 (17%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 36 MAIKENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVSPNAPPTK-PDKRIEPT 94
+ + E+++ + + A Q + A+K PP K P K+ + +
Sbjct: 3 VGVSESEDSDGHVIEDEDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKAS 62
Query: 95 VHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFK 154
++ D + E R + + S+ +S E+ E S K+K+D +++ S K
Sbjct: 63 S--SEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKK 120
Query: 155 IKTAGTFHRRPPIAAKTVTVATSNVSELTHKFNLLNQPHSSPKHSKLAKTIEGLQTARRX 214
+T + + + S+ T K S + K+ K+ + + + +
Sbjct: 121 KRTTSSSEDEDSDEEREQK--SKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKK 178
Query: 215 XXXXXXXXXXXXXXXXIKIVVRQKRGSKKRNHRKRCSSMDSIDKLIITDKESTKIQVIRS 274
K + K+G KK+ + S + ++ + K+S K+ S
Sbjct: 179 RAETSEESDEDE-----KPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKES 233
Query: 275 KSDGIKAPKYQSSKKKLKYHDSNEHQNGSDSVD 307
+S+ +AP+ + ++K+ + S+E + S+ D
Sbjct: 234 ESED-EAPEKKKTEKRKRSKTSSEESSESEKSD 265
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 32.3 bits (70), Expect = 1.3
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 396 PISNSNETPRKTQAANPDS---TLVPKKKELIYDRKKYKTNYIHTEKLPLKNMDFESDLV 452
P +S+ P K ++ D+ T P + E +K T + E + L + +
Sbjct: 195 PGHSSSRKPSKEDSSPFDASSATPAPSQLETPQQQKPTTTRHFQVEPVVLSEPSTPAPVA 254
Query: 453 EAYNKEILVGYTPK--PQKEPVI-EDDYEVLEPRESENIVVIPVKQVDMTSKMNCPLP 507
A + E L +P Q P + E ++V++ ES+N+ + VK V + ++ P P
Sbjct: 255 PAPSIETLTSTSPPVTQQLAPSLSEPTFQVIQTEESKNMSMDSVKNVVDAAALSAPAP 312
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 46 NKCVYSVPITPAIQTARTKSISEAKKAFLNATV--SPNAPPTKPDKRIEPTVHYAQLDII 103
N+ S P +P QTA + +A++ ++ ++ +P APP KP +R P + I+
Sbjct: 118 NRTTTSPPTSPPSQTAVEQDSLQAEEMLVDMSLDDAPAAPPRKPHQRSAPPPIPSMNTIM 177
Query: 104 TK 105
TK
Sbjct: 178 TK 179
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 46 NKCVYSVPITPAIQTARTKSISEAKKAFLNATV--SPNAPPTKPDKRIEPTVHYAQLDII 103
N+ S P +P QTA + +A++ ++ ++ +P APP KP +R P + I+
Sbjct: 115 NRTTTSPPTSPPSQTAVEQDSLQAEEMLVDMSLDDAPAAPPRKPHQRSAPPPIPSMNTIM 174
Query: 104 TK 105
TK
Sbjct: 175 TK 176
>Z93785-7|CAB07863.1| 107|Caenorhabditis elegans Hypothetical
protein K01G5.8b protein.
Length = 107
Score = 31.1 bits (67), Expect = 3.1
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 78 VSPNAPPTKPDKRIEPTVHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAG 137
VS AP K K+ +P + Q+D+ T D+R+T GG KT ++++ E +A A
Sbjct: 15 VSTEAP--KKTKKSKPAMDLKQVDM-TIRRDSRNTSGGGPHKTEAELRF-EARRQANMAE 70
Query: 138 SHVKRKIDPNQRKVSFKIKTAG 159
+K+ ++ KV K G
Sbjct: 71 RMLKQAALSHREKVEKLNKQLG 92
>Z92803-12|CAB07248.1| 107|Caenorhabditis elegans Hypothetical
protein K01G5.8b protein.
Length = 107
Score = 31.1 bits (67), Expect = 3.1
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 78 VSPNAPPTKPDKRIEPTVHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAG 137
VS AP K K+ +P + Q+D+ T D+R+T GG KT ++++ E +A A
Sbjct: 15 VSTEAP--KKTKKSKPAMDLKQVDM-TIRRDSRNTSGGGPHKTEAELRF-EARRQANMAE 70
Query: 138 SHVKRKIDPNQRKVSFKIKTAG 159
+K+ ++ KV K G
Sbjct: 71 RMLKQAALSHREKVEKLNKQLG 92
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.1 bits (67), Expect = 3.1
Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 4/210 (1%)
Query: 96 HYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAGSHVKRKIDPNQRKVSFKI 155
H+ + + + S + S+ +SS E + HA H+K+ + +K
Sbjct: 153 HHKKAESSSSSSSSSSSSSSSSSSSSSSESEDEKHHHKKHAKKHLKK----HHKKAESSS 208
Query: 156 KTAGTFHRRPPIAAKTVTVATSNVSELTHKFNLLNQPHSSPKHSKLAKTIEGLQTARRXX 215
++ + ++ + + + S + HK + + + H + S + + ++
Sbjct: 209 SSSSSSSSSSSSSSSSSSSSESEDEKHHHKKHAVKKHHKKAESSSSSSSSSSSSSSSSSS 268
Query: 216 XXXXXXXXXXXXXXXIKIVVRQKRGSKKRNHRKRCSSMDSIDKLIITDKESTKIQVIRSK 275
+K + S + SS S ++ E K +V K
Sbjct: 269 EDEKHHHKKHAAKKHVKHHKKAASSSSSSSSSSSSSSSSSSSSSSESEDEKKKKKVHHKK 328
Query: 276 SDGIKAPKYQSSKKKLKYHDSNEHQNGSDS 305
S G K K +S S+ + S S
Sbjct: 329 SHGKKHHKKAASSSSSSSSSSSSSSSSSSS 358
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 31.1 bits (67), Expect = 3.1
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 450 DLVEAYNKEILVGYTPKPQKEPVIEDDYEVLEPRESENIVVIPVKQVDMTSKMNCPLPEI 509
DL E ++KE+ +K I E+LE + E+ ++ K D K+ L E
Sbjct: 541 DLEEKWSKEV--------EKSNKISKKCEILEEKLQESDFLL-AKSRDEAKKLQFELDEA 591
Query: 510 PKQXXXXXXXXXXKENIYQC-LLEMRSHPEGDESSLHNYELCENELEER 557
++ ++N + LLE++ E L N + C LE+R
Sbjct: 592 LEETSHVTRSLSSEKNTLKAKLLELQDQVEAQTLELLNQKNCGKRLEDR 640
>U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical
protein T10E9.3 protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.1
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 438 EKLPLKNMDFESDLVEAYNKEILVGYTPKPQKEPVIEDDYEVLEPRESENIVVIPVKQVD 497
E++ + N+D D +E + + G TPK +P+++ D +++E + V +P K+
Sbjct: 339 ERIQICNVDSCHDPIEPQQE--IDGETPKKTTQPLVKGDEDIIE----ASGVTVPTKEAL 392
Query: 498 MTSKMNCPLPEIPK 511
+ LP PK
Sbjct: 393 INDVEGSGLPVTPK 406
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 412 PDSTLVPKKKELIYDRKKYKTNYIHTEKLPLKNMDFESDLVEAYNKEILVGYTPKPQKEP 471
P S + P K+ RK + P + E+D+ K +V P+P+ EP
Sbjct: 91 PQSEVSPSKQSEASPRKGRTPRKEKKDVEPEAEPEPEADIAPEPEKVAIVE-KPEPKPEP 149
Query: 472 VIEDDYEVLEPRESENIVVIPVKQVDMTSKMNCPLPE 508
+ E + + E + V + V++VD + P+
Sbjct: 150 ITETEASPSKASEKDAAVEVSVEKVDAETAQESDSPQ 186
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 30.7 bits (66), Expect = 4.1
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 28 NFRVTEKEMAIKENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVSPNAPPTKP 87
NF V +MA + + V + P+TP R +S+ + + NA S A P
Sbjct: 95 NFSVRTADMAFDDGNDSQMSGVRAPPVTP---RNRQRSV---RPSGSNAQPSGRAQPDYR 148
Query: 88 DKRIEPTVHYAQLDIITKSEDTRSTGGGHDLKTSSDVKSKETPNEATHAGS-HVKRKIDP 146
D R P +Q +K T + G +L D S+ NE A + KR +
Sbjct: 149 DTRQRP----SQSRDRSKQNRTGTPHGAEELGREPDRSSRSARNEGPRAETGREKRSSED 204
Query: 147 NQRKV 151
+R+V
Sbjct: 205 RKRQV 209
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 389 PKIKTIRPISNSNETPRKTQAANPDSTLVPKKK-----ELIYDRKKYKTNYIHTEKLPLK 443
P K + ++ SN TP + A P T P KK E + K H+ K P K
Sbjct: 304 PTTKKTQSVTPSNSTPSPAKPATPTKTPTPTKKPVENNETLSQVKTVSKALSHSPKSPKK 363
Query: 444 NMDFES 449
N +S
Sbjct: 364 NSQEKS 369
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.3 bits (65), Expect = 5.4
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Query: 23 KALLRNFRVTEKEMAIK---ENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVS 79
K L + T+K A K E Q NK + + + + KK+
Sbjct: 9651 KQKLESEAATKKAAAEKLKLEEQAQINKAAEADAVKKQKELDEKNKLEANKKSAAEKLKL 9710
Query: 80 PNAPPTKPDKRIEPTVHYAQLDIITKSEDT-RSTGGGHDLKTSSDVKSKETPNEATHAGS 138
K + +E A+LD TK + + TG D K++ D +SKET +E
Sbjct: 9711 EEESAAKSKQTVE---EQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETVDEKPKK-K 9766
Query: 139 HVKRKIDPNQRKVSFKIKTAGT 160
+K+K + + +S K T+ T
Sbjct: 9767 VLKKKTEKSDSSISQKSVTSKT 9788
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.3 bits (65), Expect = 5.4
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Query: 23 KALLRNFRVTEKEMAIK---ENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVS 79
K L + T+K A K E Q NK + + + + KK+
Sbjct: 9671 KQKLESEAATKKAAAEKLKLEEQAQINKAAEADAVKKQKELDEKNKLEANKKSAAEKLKL 9730
Query: 80 PNAPPTKPDKRIEPTVHYAQLDIITKSEDT-RSTGGGHDLKTSSDVKSKETPNEATHAGS 138
K + +E A+LD TK + + TG D K++ D +SKET +E
Sbjct: 9731 EEESAAKSKQTVE---EQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETVDEKPKK-K 9786
Query: 139 HVKRKIDPNQRKVSFKIKTAGT 160
+K+K + + +S K T+ T
Sbjct: 9787 VLKKKTEKSDSSISQKSVTSKT 9808
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.3 bits (65), Expect = 5.4
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Query: 23 KALLRNFRVTEKEMAIK---ENQNDTNKCVYSVPITPAIQTARTKSISEAKKAFLNATVS 79
K L + T+K A K E Q NK + + + + KK+
Sbjct: 9671 KQKLESEAATKKAAAEKLKLEEQAQINKAAEADAVKKQKELDEKNKLEANKKSAAEKLKL 9730
Query: 80 PNAPPTKPDKRIEPTVHYAQLDIITKSEDT-RSTGGGHDLKTSSDVKSKETPNEATHAGS 138
K + +E A+LD TK + + TG D K++ D +SKET +E
Sbjct: 9731 EEESAAKSKQTVE---EQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETVDEKPKK-K 9786
Query: 139 HVKRKIDPNQRKVSFKIKTAGT 160
+K+K + + +S K T+ T
Sbjct: 9787 VLKKKTEKSDSSISQKSVTSKT 9808
>Z49125-2|CAA88935.1| 333|Caenorhabditis elegans Hypothetical
protein C47G2.2 protein.
Length = 333
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 286 SSKKKLKYHDSNEHQNGSDSVDGLAAKSVINEPEKDIKATGNNVKSVIKKFE 337
+S+K + H + H S L A S++N PEK + + +I KFE
Sbjct: 112 TSRKSMSGHRKSSHAKPPYSYIALIAMSILNSPEKKL-TLSEICEFIINKFE 162
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 7.1
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 3/171 (1%)
Query: 255 SIDKLIITDKESTKIQVIRSKSDGIKAP-KYQSSKKKLKYHDSNEHQNGSDSVDGLAAK- 312
S +K ++ + +S K + D K+P K + S +K D S + + K
Sbjct: 1607 SPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKP 1666
Query: 313 -SVINEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKKQPDPTKSXXXXXXXXXXXX 371
S + K T + VKS KK + + + KK+ P KS
Sbjct: 1667 TSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKS 1726
Query: 372 XXXXXXLTKNIVVKDGIPKIKTIRPISNSNETPRKTQAANPDSTLVPKKKE 422
K+ K+ P+ + + + + + + + P KKE
Sbjct: 1727 PEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.9 bits (64), Expect = 7.1
Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 64 KSISEAKKAFLNATVSPNAPPTKP-DKRIEPTVHYAQLDIITKSEDTRSTGGGHDLKTSS 122
K S A+ +V + +K DK +EP V A+ + KS + ++ K +
Sbjct: 437 KKRSRRSSAYSGNSVESKSLESKSLDKEVEPKVRTARKSMAAKSVEPKTLE-----KDAE 491
Query: 123 DVKSKETPNEATHAGSHVKRKIDPNQRKVSFKIKTAGTFHRRPPIAAKTVTVATSNVSEL 182
+ E+P + + +I ++K+ KI+ + + R AK + + E
Sbjct: 492 PSRKSESPEKTVEPPAKSSEEIKEEKKKL--KIRRSSAYFR----VAKPLPTSDDAAPET 545
Query: 183 THKFNLLNQPHSSPKHSKLA 202
+ +++ P +P++ KLA
Sbjct: 546 EEEIVVISSP-EAPENGKLA 564
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 7.1
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 3/171 (1%)
Query: 255 SIDKLIITDKESTKIQVIRSKSDGIKAP-KYQSSKKKLKYHDSNEHQNGSDSVDGLAAK- 312
S +K ++ + +S K + D K+P K + S +K D S + + K
Sbjct: 1607 SPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKP 1666
Query: 313 -SVINEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKKQPDPTKSXXXXXXXXXXXX 371
S + K T + VKS KK + + + KK+ P KS
Sbjct: 1667 TSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKS 1726
Query: 372 XXXXXXLTKNIVVKDGIPKIKTIRPISNSNETPRKTQAANPDSTLVPKKKE 422
K+ K+ P+ + + + + + + + P KKE
Sbjct: 1727 PEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 7.1
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 3/171 (1%)
Query: 255 SIDKLIITDKESTKIQVIRSKSDGIKAP-KYQSSKKKLKYHDSNEHQNGSDSVDGLAAK- 312
S +K ++ + +S K + D K+P K + S +K D S + + K
Sbjct: 1607 SPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKP 1666
Query: 313 -SVINEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKKQPDPTKSXXXXXXXXXXXX 371
S + K T + VKS KK + + + KK+ P KS
Sbjct: 1667 TSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKS 1726
Query: 372 XXXXXXLTKNIVVKDGIPKIKTIRPISNSNETPRKTQAANPDSTLVPKKKE 422
K+ K+ P+ + + + + + + + P KKE
Sbjct: 1727 PEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 7.1
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 3/171 (1%)
Query: 255 SIDKLIITDKESTKIQVIRSKSDGIKAP-KYQSSKKKLKYHDSNEHQNGSDSVDGLAAK- 312
S +K ++ + +S K + D K+P K + S +K D S + + K
Sbjct: 1607 SPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKP 1666
Query: 313 -SVINEPEKDIKATGNNVKSVIKKFECEINAQTINTNTIKKQPDPTKSXXXXXXXXXXXX 371
S + K T + VKS KK + + + KK+ P KS
Sbjct: 1667 TSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKS 1726
Query: 372 XXXXXXLTKNIVVKDGIPKIKTIRPISNSNETPRKTQAANPDSTLVPKKKE 422
K+ K+ P+ + + + + + + + P KKE
Sbjct: 1727 PEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKE 1777
>Z75710-2|CAB00024.1| 741|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 741
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 278 GIKAPKYQSSKKKLKYHDSNEHQNGSDSVDGLAAKSVINEPEKDIKATGNNVKSVIKKF- 336
GIK+ +S + Y D ++ N G+ K + P + ++ N ++ ++
Sbjct: 556 GIKSTTGYNSNQYEYYFDLRKYNNEICEFSGVCTKGPVGRPSSEASSSSNQPEATTQQIV 615
Query: 337 --ECEINAQTINTNTIKKQPDPTKS 359
+ N+ +NTN K + + S
Sbjct: 616 QNSSDPNSPNVNTNPSKNRNTTSNS 640
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 9.4
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 239 RGSKKRNHRKRCSSMDSIDKLIITDKESTKIQVIRSKSDGIKAPKYQ--SSKKKLKYHDS 296
R K +N+ ++ I++ + K + I + K Q S K+KLK +
Sbjct: 9 RQIKNKNNAEKLKQQKEINEEYLELKRNLDKTEIEGELQFQMLEKQQNDSQKEKLK-NTE 67
Query: 297 NEHQNGSDSVDGLAAKSVINEPEKDIKATGNNVKSVIKKFECEIN-AQTIN 346
NG ++ L AK +++ K N + S K FECE N ++T+N
Sbjct: 68 TAILNGIANLAKLRAKQSLDDQFNLFKQQCNILCSKYKLFECEFNISETLN 118
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.309 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,353
Number of Sequences: 27539
Number of extensions: 732079
Number of successful extensions: 2197
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2181
Number of HSP's gapped (non-prelim): 59
length of query: 774
length of database: 12,573,161
effective HSP length: 87
effective length of query: 687
effective length of database: 10,177,268
effective search space: 6991783116
effective search space used: 6991783116
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 63 (29.5 bits)
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