GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002799-TA|BGIBMGA002799-PA|undefined
         (122 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein.     29   5.3  

>AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein.
          Length = 1560

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 17   PSVPIEIPDDGGDTEVCRTCSMSDVENKEVNTSL 50
            P+ P+ +P+D G     R C    VE++ V+T L
Sbjct: 1224 PAPPLPLPEDPGTLSAERRCLTQPVEDQGVSTQL 1257


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.130    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,811,038
Number of Sequences: 224733
Number of extensions: 469235
Number of successful extensions: 912
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 1
length of query: 122
length of database: 73,234,838
effective HSP length: 81
effective length of query: 41
effective length of database: 55,031,465
effective search space: 2256290065
effective search space used: 2256290065
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)