GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002799-TA|BGIBMGA002799-PA|undefined
         (122 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   0.99 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   4.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 0.99
 Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 8   IKRLLKTAVPSVPIEIPDDGGDTEVCRTCSMSDVENKEVN-TSLSTSLILHIHTTEGS 64
           + ++ KT+ P   ++ P+  G+         SDVE + V+ T+++++ I+  ++   S
Sbjct: 299 LAKMEKTSKPLPMVDNPESTGNLVYIYNNPFSDVEERRVSKTAMNSNQIVSDNSLSSS 356


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 38  MSDVENKEVNTSLSTSLILHIHTTEGSTTDTPRKVDITS 76
           + D+E  ++ T LST +   I        +  +K+D+ S
Sbjct: 296 VEDMEYDDIKTELSTGMNDDIPPETEEEEENDKKLDLDS 334


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 11  LLKTAVPSVPIEIPD 25
           +L  A P VP+E PD
Sbjct: 324 ILYLATPFVPVEPPD 338


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 13  KTAVPSVPIEIPDDGGDTEVCRTCSMSDVENKEVNTSLSTSLILHIHTTEGSTTDTPR 70
           + A  + P    D+  D E+       +VE   +   LS   ++   T EGS  D+ R
Sbjct: 682 QNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGSGGDSLR 739


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.130    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,954
Number of Sequences: 429
Number of extensions: 1088
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 122
length of database: 140,377
effective HSP length: 51
effective length of query: 71
effective length of database: 118,498
effective search space:  8413358
effective search space used:  8413358
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
S2: 39 (19.8 bits)