GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002798-TA|BGIBMGA002798-PA|IPR001424|Superoxide
dismutase, copper/zinc binding
         (242 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   139   8e-35
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           80   7e-17
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           62   2e-11
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   3.5  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   4.6  
AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    23   6.1  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  139 bits (336), Expect = 8e-35
 Identities = 66/141 (46%), Positives = 84/141 (59%)

Query: 101 SGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRH 160
           SGVSG++  +Q     PV I+ NV GL PG HG H+H+ GD+ D C   G H+      H
Sbjct: 31  SGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCASTGGHYNPDKVSH 90

Query: 161 GGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRAST 220
           G P D +RHVGDLGNI A+E         D ++SL G RSV+GR+I I    DD G+ + 
Sbjct: 91  GAPNDQVRHVGDLGNIAADENGIAKTSYSDTVVSLYGARSVIGRAIVIHAEVDDLGKTNH 150

Query: 221 EDSALTGTSGPAVACGIIGYL 241
            DS  TG +G  VACG+IG L
Sbjct: 151 PDSLKTGNAGGRVACGVIGIL 171


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 79.8 bits (188), Expect = 7e-17
 Identities = 37/80 (46%), Positives = 50/80 (62%)

Query: 160 HGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRAS 219
           HG P D   HVGDLGNI A       ++I +  ++L G RS++GR+++IS+ EDD GR  
Sbjct: 8   HGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYEDDLGRGK 67

Query: 220 TEDSALTGTSGPAVACGIIG 239
            + S  TG SG  +AC IIG
Sbjct: 68  HDYSKTTGNSGNCIACAIIG 87


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 61.7 bits (143), Expect = 2e-11
 Identities = 29/71 (40%), Positives = 41/71 (57%)

Query: 169 HVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTEDSALTGT 228
           H GD+GNI A+E     + +    I+L+G  +VVGRS+ +    DD G    E S  TG 
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGD 60

Query: 229 SGPAVACGIIG 239
           +G  +ACG+IG
Sbjct: 61  AGARLACGVIG 71


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 180 EEATLNLKIVDHLISLAGPRSVVGRSIAISK 210
           +EAT N     +    AGPR+ +G+ + +SK
Sbjct: 417 DEATKNYDADAYYPFGAGPRNCIGQGVLVSK 447


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 14  WLVAVLNGKTLQ-GIPGYGRNLIIKS 38
           WL     G+ L  GIP YGRN  + S
Sbjct: 262 WLAQGCTGRKLVLGIPLYGRNFTLAS 287


>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 38  SLPAIEDYQSPVYEVYMEPYLY 59
           ++PA  D+  P+Y ++  P +Y
Sbjct: 84  TIPAGTDFTIPIYVIHRNPVVY 105


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.140    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,842
Number of Sequences: 2123
Number of extensions: 11773
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 7
length of query: 242
length of database: 516,269
effective HSP length: 62
effective length of query: 180
effective length of database: 384,643
effective search space: 69235740
effective search space used: 69235740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)