Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002798-TA|BGIBMGA002798-PA|IPR001424|Superoxide
dismutase, copper/zinc binding
(242 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 140 4e-33
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 140 4e-33
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 140 4e-33
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 140 4e-33
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 140 4e-33
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 140 4e-33
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 140 4e-33
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 140 4e-33
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 140 4e-33
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 140 4e-33
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 137 3e-32
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 122 1e-27
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 122 1e-27
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 122 1e-27
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 122 1e-27
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 121 3e-27
U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase prot... 79 1e-14
J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein. 79 1e-14
CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein. 79 1e-14
BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,... 79 1e-14
AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,... 79 1e-14
X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxid... 43 8e-04
X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxid... 43 0.001
L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase prot... 40 0.010
X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismuta... 36 0.13
X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxid... 36 0.13
L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase prot... 33 0.90
L44746-1|AAC41773.1| 35|Homo sapiens superoxide dismutase prot... 31 2.8
CR456377-1|CAG30263.1| 615|Homo sapiens Em:AP000557.1 protein. 31 3.6
BC094787-1|AAH94787.1| 615|Homo sapiens HIC2 protein protein. 31 3.6
AL162003-1|CAB82344.1| 315|Homo sapiens hypothetical protein pr... 31 3.6
AF349035-1|AAK72951.1| 597|Homo sapiens HIC-3 protein. 31 3.6
AB028943-1|BAA82972.2| 638|Homo sapiens KIAA1020 protein protein. 31 3.6
AF195508-1|AAF76458.1| 321|Homo sapiens gamma II-tryptase protein. 30 8.4
AF191031-1|AAF76457.1| 321|Homo sapiens gamma I-tryptase protein. 30 8.4
AF175759-1|AAF03697.1| 321|Homo sapiens transmembrane tryptase ... 30 8.4
AF175522-1|AAF03695.1| 321|Homo sapiens transmembrane tryptase ... 30 8.4
AE006466-4|AAK61269.1| 321|Homo sapiens HS transmembrane trypta... 30 8.4
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 140 bits (339), Expect = 4e-33
Identities = 60/137 (43%), Positives = 86/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I D +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 137 bits (332), Expect = 3e-32
Identities = 59/137 (43%), Positives = 85/137 (62%)
Query: 103 VSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYGRHGG 162
V G + F Q NGPV + G++ GL GLHG HVH+ GD C GPHF +HGG
Sbjct: 15 VQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGG 74
Query: 163 PRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRASTED 222
P+D RHVGDLGN+ A+++ ++ I +ISL+G ++GR++ + + DD G+ E+
Sbjct: 75 PKDEERHVGDLGNVTADKDGVADVSIEGSVISLSGDHCIIGRTLVVHEKADDLGKGGNEE 134
Query: 223 SALTGTSGPAVACGIIG 239
S TG +G +ACG+IG
Sbjct: 135 STKTGNAGSRLACGVIG 151
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 122 bits (294), Expect = 1e-27
Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 37 KSLPAIEDYQSPVYEVYMEPYLYALGQTTYPLNDNRA------EKQIDLSMAPHHAPGLQ 90
KSL + Q EV++E + L TT P + +A + + M L
Sbjct: 31 KSLQGVAGVQD--VEVHLEDQM-VLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLG 87
Query: 91 AVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIG 150
A V + + V G + F Q+ P + IEG + GL PGLHGLHVHQ GD+ +NC G
Sbjct: 88 AAVAILGGPGT-VQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCG 145
Query: 151 PHFFAYYGRHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISK 210
HF HGGP+D RH GDLGN++A+ + ++ D + + V+GRS+ I +
Sbjct: 146 NHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDE 202
Query: 211 SEDDYGRASTEDSALTGTSGPAVACGII 238
EDD GR S +TG SG +ACGII
Sbjct: 203 GEDDLGRGGHPLSKITGNSGERLACGII 230
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 122 bits (294), Expect = 1e-27
Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 37 KSLPAIEDYQSPVYEVYMEPYLYALGQTTYPLNDNRA------EKQIDLSMAPHHAPGLQ 90
KSL + Q EV++E + L TT P + +A + + M L
Sbjct: 31 KSLQGVAGVQD--VEVHLEDQM-VLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLG 87
Query: 91 AVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIG 150
A V + + V G + F Q+ P + IEG + GL PGLHGLHVHQ GD+ +NC G
Sbjct: 88 AAVAILGGPGT-VQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCG 145
Query: 151 PHFFAYYGRHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISK 210
HF HGGP+D RH GDLGN++A+ + ++ D + + V+GRS+ I +
Sbjct: 146 NHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDE 202
Query: 211 SEDDYGRASTEDSALTGTSGPAVACGII 238
EDD GR S +TG SG +ACGII
Sbjct: 203 GEDDLGRGGHPLSKITGNSGERLACGII 230
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 122 bits (294), Expect = 1e-27
Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 37 KSLPAIEDYQSPVYEVYMEPYLYALGQTTYPLNDNRA------EKQIDLSMAPHHAPGLQ 90
KSL + Q EV++E + L TT P + +A + + M L
Sbjct: 31 KSLQGVAGVQD--VEVHLEDQM-VLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLG 87
Query: 91 AVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIG 150
A V + + V G + F Q+ P + IEG + GL PGLHGLHVHQ GD+ +NC G
Sbjct: 88 AAVAILGGPGT-VQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCG 145
Query: 151 PHFFAYYGRHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISK 210
HF HGGP+D RH GDLGN++A+ + ++ D + + V+GRS+ I +
Sbjct: 146 NHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDE 202
Query: 211 SEDDYGRASTEDSALTGTSGPAVACGII 238
EDD GR S +TG SG +ACGII
Sbjct: 203 GEDDLGRGGHPLSKITGNSGERLACGII 230
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 122 bits (294), Expect = 1e-27
Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 37 KSLPAIEDYQSPVYEVYMEPYLYALGQTTYPLNDNRA------EKQIDLSMAPHHAPGLQ 90
KSL + Q EV++E + L TT P + +A + + M L
Sbjct: 31 KSLQGVAGVQD--VEVHLEDQM-VLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLG 87
Query: 91 AVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIG 150
A V + + V G + F Q+ P + IEG + GL PGLHGLHVHQ GD+ +NC G
Sbjct: 88 AAVAILGGPGT-VQGVVRFLQLTPERCL-IEGTIDGLEPGLHGLHVHQYGDLTNNCNSCG 145
Query: 151 PHFFAYYGRHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISK 210
HF HGGP+D RH GDLGN++A+ + ++ D + + V+GRS+ I +
Sbjct: 146 NHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDE 202
Query: 211 SEDDYGRASTEDSALTGTSGPAVACGII 238
EDD GR S +TG SG +ACGII
Sbjct: 203 GEDDLGRGGHPLSKITGNSGERLACGII 230
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 121 bits (291), Expect = 3e-27
Identities = 76/208 (36%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 37 KSLPAIEDYQSPVYEVYMEPYLYALGQTTYPLNDNRA------EKQIDLSMAPHHAPGLQ 90
KSL + Q EV++E + L TT P + +A + + M L
Sbjct: 31 KSLQGVAGVQD--VEVHLEDQM-VLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLG 87
Query: 91 AVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIG 150
A V + + V G + F Q+ P + I+G + GL PGLHGLHVHQ GD+ +NC G
Sbjct: 88 AAVAILGGPGT-VQGVVRFLQLTPERCL-IDGTIDGLEPGLHGLHVHQYGDLTNNCNSCG 145
Query: 151 PHFFAYYGRHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISK 210
HF HGGP+D RH GDLGN++A+ + ++ D + + V+GRS+ I +
Sbjct: 146 NHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDE 202
Query: 211 SEDDYGRASTEDSALTGTSGPAVACGII 238
EDD GR S +TG SG +ACGII
Sbjct: 203 GEDDLGRGGHPLSKITGNSGERLACGII 230
>U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase
protein.
Length = 240
Score = 79.0 bits (186), Expect = 1e-14
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 103 VSGDLIFTQIVPNGPV----TIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYG 158
V+G ++F Q+ P + +EG T +HVHQ GD+ C+ GPH+
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 159 RHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRA 218
H +H GD GN + + + SLAGP S+VGR++ + EDD GR
Sbjct: 138 PHP------QHPGDFGNFAVRDGSLWRYR-AGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 219 STEDSALTGTSGPAVACGIIG 239
+ S G +G +AC ++G
Sbjct: 191 GNQASVENGNAGRRLACCVVG 211
>J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 79.0 bits (186), Expect = 1e-14
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 103 VSGDLIFTQIVPNGPV----TIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYG 158
V+G ++F Q+ P + +EG T +HVHQ GD+ C+ GPH+
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 159 RHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRA 218
H +H GD GN + + + SLAGP S+VGR++ + EDD GR
Sbjct: 138 PHP------QHPGDFGNFAVRDGSLWRYR-AGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 219 STEDSALTGTSGPAVACGIIG 239
+ S G +G +AC ++G
Sbjct: 191 GNQASVENGNAGRRLACCVVG 211
>CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 79.0 bits (186), Expect = 1e-14
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 103 VSGDLIFTQIVPNGPV----TIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYG 158
V+G ++F Q+ P + +EG T +HVHQ GD+ C+ GPH+
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 159 RHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRA 218
H +H GD GN + + + SLAGP S+VGR++ + EDD GR
Sbjct: 138 PHP------QHPGDFGNFAVRDGSLWRYR-AGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 219 STEDSALTGTSGPAVACGIIG 239
+ S G +G +AC ++G
Sbjct: 191 GNQASVENGNAGRRLACCVVG 211
>BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 79.0 bits (186), Expect = 1e-14
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 103 VSGDLIFTQIVPNGPV----TIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYG 158
V+G ++F Q+ P + +EG T +HVHQ GD+ C+ GPH+
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 159 RHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRA 218
H +H GD GN + + + SLAGP S+VGR++ + EDD GR
Sbjct: 138 PHP------QHPGDFGNFAVRDGSLWRYR-AGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 219 STEDSALTGTSGPAVACGIIG 239
+ S G +G +AC ++G
Sbjct: 191 GNQASVENGNAGRRLACCVVG 211
>AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 79.0 bits (186), Expect = 1e-14
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 103 VSGDLIFTQIVPNGPV----TIEGNVTGLAPGLHGLHVHQTGDIKDNCKDIGPHFFAYYG 158
V+G ++F Q+ P + +EG T +HVHQ GD+ C+ GPH+
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 159 RHGGPRDPIRHVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSIAISKSEDDYGRA 218
H +H GD GN + + + SLAGP S+VGR++ + EDD GR
Sbjct: 138 PHP------QHPGDFGNFAVRDGSLWRYR-AGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 219 STEDSALTGTSGPAVACGIIG 239
+ S G +G +AC ++G
Sbjct: 191 GNQASVENGNAGRRLACCVVG 211
>X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 4. ).
Length = 39
Score = 43.2 bits (97), Expect = 8e-04
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 169 HVGDLGNIKAEEEATLNLKIVDHLISLAGPRSVVGRSI 206
HVGDLGN+ A+++ ++ I D +ISL+G ++GR++
Sbjct: 1 HVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTL 38
>X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 2. ).
Length = 32
Score = 42.7 bits (96), Expect = 0.001
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 115 NGPVTIEGNVTGLAPGLHGLHVHQTGD 141
NGPV + G++ GL GLHG HVH+ GD
Sbjct: 3 NGPVKVWGSIKGLTEGLHGFHVHEFGD 29
>L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase
protein.
Length = 32
Score = 39.5 bits (88), Expect = 0.010
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 115 NGPVTIEGNVTGLAPGLHGLHVHQTGD 141
NGPV + G++ GL GLHG HV + GD
Sbjct: 3 NGPVKVWGSIKGLTEGLHGFHVQEFGD 29
>X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismutase
protein.
Length = 35
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 208 ISKSEDDYGRASTEDSALTGTSGPAVACGIIG 239
+ + DD G+ E+S TG +G +ACG+IG
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLACGVIG 32
>X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 5 and 3' flanking region.
).
Length = 35
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 208 ISKSEDDYGRASTEDSALTGTSGPAVACGIIG 239
+ + DD G+ E+S TG +G +ACG+IG
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLACGVIG 32
>L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase
protein.
Length = 35
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 208 ISKSEDDYGRASTEDSALTGTSGPAVACGIIG 239
+ + D G+ E+S TG +G +ACG+IG
Sbjct: 1 VHEKADHLGKGGNEESTKTGNAGSRLACGVIG 32
>L44746-1|AAC41773.1| 35|Homo sapiens superoxide dismutase
protein.
Length = 35
Score = 31.5 bits (68), Expect = 2.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 210 KSEDDYGRASTEDSALTGTSGPAVACGIIG 239
K + G+ E+S TG +G +ACG+IG
Sbjct: 3 KKQIHLGKGGNEESTKTGNAGSRLACGVIG 32
>CR456377-1|CAG30263.1| 615|Homo sapiens Em:AP000557.1 protein.
Length = 615
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 168 RHVGDLGNIKAEEEATLNLKIVDHLI-SLAGPRSVVGRSIAISKSEDDYGRASTEDSALT 226
R G G EE + ++ + ++ S AGP G K E++ G+ ++EDSA +
Sbjct: 353 REAGPKGPCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQS 412
Query: 227 GTSG 230
G+ G
Sbjct: 413 GSEG 416
>BC094787-1|AAH94787.1| 615|Homo sapiens HIC2 protein protein.
Length = 615
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 168 RHVGDLGNIKAEEEATLNLKIVDHLI-SLAGPRSVVGRSIAISKSEDDYGRASTEDSALT 226
R G G EE + ++ + ++ S AGP G K E++ G+ ++EDSA +
Sbjct: 353 REAGPKGPCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQS 412
Query: 227 GTSG 230
G+ G
Sbjct: 413 GSEG 416
>AL162003-1|CAB82344.1| 315|Homo sapiens hypothetical protein
protein.
Length = 315
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 168 RHVGDLGNIKAEEEATLNLKIVDHLI-SLAGPRSVVGRSIAISKSEDDYGRASTEDSALT 226
R G G EE + ++ + ++ S AGP G K E++ G+ ++EDSA +
Sbjct: 53 REAGPKGPCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQS 112
Query: 227 GTSG 230
G+ G
Sbjct: 113 GSEG 116
>AF349035-1|AAK72951.1| 597|Homo sapiens HIC-3 protein.
Length = 597
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 168 RHVGDLGNIKAEEEATLNLKIVDHLI-SLAGPRSVVGRSIAISKSEDDYGRASTEDSALT 226
R G G EE + ++ + ++ S AGP G K E++ G+ ++EDSA +
Sbjct: 335 REAGPKGPCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQS 394
Query: 227 GTSG 230
G+ G
Sbjct: 395 GSEG 398
>AB028943-1|BAA82972.2| 638|Homo sapiens KIAA1020 protein protein.
Length = 638
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 168 RHVGDLGNIKAEEEATLNLKIVDHLI-SLAGPRSVVGRSIAISKSEDDYGRASTEDSALT 226
R G G EE + ++ + ++ S AGP G K E++ G+ ++EDSA +
Sbjct: 376 REAGPKGPCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQS 435
Query: 227 GTSG 230
G+ G
Sbjct: 436 GSEG 439
>AF195508-1|AAF76458.1| 321|Homo sapiens gamma II-tryptase protein.
Length = 321
Score = 29.9 bits (64), Expect = 8.4
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 76 QIDLSMAPHHAPGLQAVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNV 124
+++++++PH + Q ++H + G SGD+ ++ PVT+ +
Sbjct: 95 ELEITLSPHFSTVRQIILHSSPSGQPGTSGDMALVELTV--PVTLSSRI 141
>AF191031-1|AAF76457.1| 321|Homo sapiens gamma I-tryptase protein.
Length = 321
Score = 29.9 bits (64), Expect = 8.4
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 76 QIDLSMAPHHAPGLQAVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNV 124
+++++++PH + Q ++H + G SGD+ ++ + PVT+ +
Sbjct: 95 ELEITLSPHFSTVRQIILHSSPSGQPGTSGDIALVEL--SVPVTLSSRI 141
>AF175759-1|AAF03697.1| 321|Homo sapiens transmembrane tryptase
protein.
Length = 321
Score = 29.9 bits (64), Expect = 8.4
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 76 QIDLSMAPHHAPGLQAVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNV 124
+++++++PH + Q ++H + G SGD+ ++ + PVT+ +
Sbjct: 95 ELEITLSPHFSTVRQIILHSSPSGQPGTSGDIALVEL--SVPVTLSSRI 141
>AF175522-1|AAF03695.1| 321|Homo sapiens transmembrane tryptase
protein.
Length = 321
Score = 29.9 bits (64), Expect = 8.4
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 76 QIDLSMAPHHAPGLQAVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNV 124
+++++++PH + Q ++H + G SGD+ ++ + PVT+ +
Sbjct: 95 ELEITLSPHFSTVRQIILHSSPSGQPGTSGDIALVEL--SVPVTLSSRI 141
>AE006466-4|AAK61269.1| 321|Homo sapiens HS transmembrane tryptase;
gene name TMT; AF175522_1 protein.
Length = 321
Score = 29.9 bits (64), Expect = 8.4
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 76 QIDLSMAPHHAPGLQAVVHFIADEESGVSGDLIFTQIVPNGPVTIEGNV 124
+++++++PH + Q ++H + G SGD+ ++ + PVT+ +
Sbjct: 95 ELEITLSPHFSTVRQIILHSSPSGQPGTSGDIALVEL--SVPVTLSSRI 141
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.140 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,543,974
Number of Sequences: 224733
Number of extensions: 1675025
Number of successful extensions: 6037
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5999
Number of HSP's gapped (non-prelim): 38
length of query: 242
length of database: 73,234,838
effective HSP length: 88
effective length of query: 154
effective length of database: 53,458,334
effective search space: 8232583436
effective search space used: 8232583436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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