GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002797-TA|BGIBMGA002797-PA|IPR000301|CD9/CD37/CD63
antigen, IPR008952|Tetraspanin
         (119 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.20 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   2.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   3.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   3.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   3.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    20   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   9.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   9.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.20
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 32  NLECCGVTGPDNYGASEPRLNPSFSC-CPPDDSDRAVEIKRSDCLSLEKYYKEGCEDKV 89
           N++ C      N G     +N SFSC CP        EI   DC     +    C DKV
Sbjct: 222 NVDDCKPNPCQNGGTCHDLVN-SFSCSCPSGTLGYICEINVDDCRPGACHNNGTCLDKV 279


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 14  STKEEDSTYREFWDKIQNNLECCGVTGPDN 43
           ST  + +T  +FW +   +L C  V G  N
Sbjct: 314 STTCDIATILDFWVRCVLSLHCAAVGGSAN 343


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 28  KIQNNLECCGVTGPDNYGASEP 49
           K+  NL+   V   D +GA EP
Sbjct: 195 KVAENLDMINVMAYDFHGAFEP 216


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 28  KIQNNLECCGVTGPDNYGASEP 49
           K+  NL+   V   D +GA EP
Sbjct: 196 KVAENLDMINVMAYDFHGAFEP 217


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 28  KIQNNLECCGVTGPDNYGASEP 49
           K+  NL+   V   D +GA EP
Sbjct: 196 KVAENLDMINVMAYDFHGAFEP 217


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 72  SDCLSLEKYYKEGCEDKVLSTVHSAGMTVIVCGILFCFL 110
           S CL     + E    KVL  + S   +   C +LF FL
Sbjct: 210 SVCLCGASVHSES--SKVLPLLFSVSSSSYNCEVLFSFL 246


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 74  CLSLEKYYKEGCEDKVLSTVHSAGMTVIVCGILFCFL 110
           C+ L  Y       K  S  HS G+ + +     C+L
Sbjct: 784 CVFLMGYQIFDWVQKEQSLAHSVGVFLTIFNAAHCYL 820


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 23  REFWDKIQNNLECC 36
           R  W ++  NLE C
Sbjct: 91  RRTWTRLLKNLESC 104


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,480
Number of Sequences: 317
Number of extensions: 1242
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 119
length of database: 114,650
effective HSP length: 50
effective length of query: 69
effective length of database: 98,800
effective search space:  6817200
effective search space used:  6817200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)