Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002797-TA|BGIBMGA002797-PA|IPR000301|CD9/CD37/CD63
antigen, IPR008952|Tetraspanin
(119 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 37 0.003
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 33 0.070
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 32 0.12
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 31 0.21
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 31 0.28
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 29 1.1
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 29 1.1
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 28 2.0
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 28 2.0
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 27 2.6
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 27 3.5
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z66500-7|CAA91311.1| 182|Caenorhabditis elegans Hypothetical pr... 27 4.6
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 27 4.6
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 27 4.6
U88167-4|AAB42228.3| 452|Caenorhabditis elegans Tetraspanin fam... 26 6.1
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 26 6.1
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 26 6.1
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 26 8.1
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 24 EFWDKIQNNLECCGVTGPDN---YGASE-------PRLNPSFSCCPPDDSDR 65
E WD +Q+N +CCGV G DN + S+ P+L SCC P + +R
Sbjct: 146 ESWDALQSNFKCCGVNGTDNAQIWKTSKWYMHQRAPKLLIPESCCIPSEIER 197
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 32.7 bits (71), Expect = 0.070
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 26 WDKIQNNLECCGVTGPD--NYGASEP-RLNPSFSCCPPDDSDRAVEIKRSDCLSLEK--Y 80
WD +Q L+CCGV +Y P L SCC P D + L E+
Sbjct: 137 WDHLQRELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDAENGTENCGKLPDEQSLL 196
Query: 81 YKEGCEDK 88
Y++GC K
Sbjct: 197 YQKGCFPK 204
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 31.9 bits (69), Expect = 0.12
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 10 IKNKSTKEEDSTYREFWDKIQNNLECCGV---TGPDN----YGASEPRLNPSFSCCPPDD 62
+K + ++ + WDKI CCGV G N Y + R +CCPPD+
Sbjct: 161 MKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNNSGWYQLNHGRYQFPPACCPPDE 220
Query: 63 SDRAVEIKRSDCLSLEKYYKEGCEDKV 89
R R C ++ + + GC K+
Sbjct: 221 HGRL----RPYCNTIMR-HSHGCYAKI 242
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 31.1 bits (67), Expect = 0.21
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 6 RASFIKNKSTKEEDSTYREFWDKIQNNLECCGVTGPDNYGASEPRLNPSFSCCPPDDSDR 65
R + I N + EEDS +REF I+ + E D + E L P C D DR
Sbjct: 452 RRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKE--LAPGPDCQSDADIDR 509
Query: 66 AVEIKRSDCLSLEKYYKEGCEDKVLSTVHSAGMTV 100
V+ K + K G E+ ++ V+ M V
Sbjct: 510 FVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGV 544
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 30.7 bits (66), Expect = 0.28
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 14 STKEEDSTYREFWDKIQNNLECCGVTGPDNYGAS 47
+++ E+ EF DK+Q +CCG GP +Y +S
Sbjct: 103 TSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISS 136
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 24 EFWDKIQNNLECCGVTGPDNYGASEPRLNPSFSC 57
E D +Q NLECCGV+ G + ++ F+C
Sbjct: 156 EIMDALQENLECCGVSSIAQ-GYRDWNMSYQFNC 188
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 24 EFWDKIQNNLECCGVTGPDNYGASEPRLNPSFSC 57
E D +Q NLECCGV+ G + ++ F+C
Sbjct: 180 EIMDALQENLECCGVSSIAQ-GYRDWNMSYQFNC 212
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 42 DNYGASEPRLNPSFSC-CPPDDSDRAVEIKRSDCLSLEKYYKEGCEDKVLS 91
+N G P +N S+SC C P + E DC ++E C D +LS
Sbjct: 997 ENNGKCIP-INGSYSCMCSPGFTGNNCETNIDDCKNVECQNGGSCVDGILS 1046
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 42 DNYGASEPRLNPSFSC-CPPDDSDRAVEIKRSDCLSLEKYYKEGCEDKVLS 91
+N G P +N S+SC C P + E DC ++E C D +LS
Sbjct: 997 ENNGKCIP-INGSYSCMCSPGFTGNNCETNIDDCKNVECQNGGSCVDGILS 1046
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 26 WDKIQNNLECCGVTGPDNY 44
WDK ECCGVT ++
Sbjct: 135 WDKTHQLFECCGVTNSSDW 153
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 10 IKNKSTKEEDSTYREFWDKIQNNLECCGV 38
I+N+ + E + +++ +D +Q ECCGV
Sbjct: 126 IRNRYSSE--TAFKDAFDTVQEKFECCGV 152
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 64 DRAVEIKRSDCLSLEKYYKEGCE---DKVLSTVHSAGMTVIVCGILFCF 109
DR V+I S+C SL+ GCE + V +V + + +L CF
Sbjct: 216 DRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCF 264
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 64 DRAVEIKRSDCLSLEKYYKEGCE---DKVLSTVHSAGMTVIVCGILFCF 109
DR V+I S+C SL+ GCE + V +V + + +L CF
Sbjct: 216 DRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCF 264
>Z81134-4|CAB03451.1| 322|Caenorhabditis elegans Hypothetical
protein T28D6.7 protein.
Length = 322
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 19 DSTYREFWDKIQNNLECCGVTGPDN 43
DS YR WDK E G P+N
Sbjct: 125 DSAYRAKWDKYMIKQETIGTINPNN 149
>Z66500-7|CAA91311.1| 182|Caenorhabditis elegans Hypothetical
protein T05C12.9 protein.
Length = 182
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 28 KIQNNLECCGVTGPDNYGASEPRLNPS 54
K Q ECCGV P + G ++ + PS
Sbjct: 129 KFQKITECCGVPLPTSTGWNQSSITPS 155
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 9 FIKNKSTKEEDSTYREFWDKIQNNLECCGVTG 40
F+ +T E + E D+++ NL+ GVTG
Sbjct: 779 FLMEDATSEREKMLSEKADELETNLKLSGVTG 810
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 9 FIKNKSTKEEDSTYREFWDKIQNNLECCGVTG 40
F+ +T E + E D+++ NL+ GVTG
Sbjct: 779 FLMEDATSEREKMLSEKADELETNLKLSGVTG 810
>U88167-4|AAB42228.3| 452|Caenorhabditis elegans Tetraspanin family
protein 19 protein.
Length = 452
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 30 QNNLECCGVTGPDNYGAS 47
Q ++CCGV G D+Y S
Sbjct: 196 QARMKCCGVEGADDYSKS 213
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 34 ECCGVTGPDNYGASEPRLNPSFSCCPPDDSDRAVEIKR-SDCLSLEKYYKEGCEDKVLST 92
E + G DN+ N F CP S++ E + D ++ E + ED VL T
Sbjct: 88 EAIRIAGFDNFADQLQESNGVFEACPEAHSEQGNESEDFKDLINSET--ECNIEDVVLPT 145
Query: 93 VH 94
VH
Sbjct: 146 VH 147
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 34 ECCGVTGPDNYGASEPRLNPSFSCCPPDDSDRAVEIKR-SDCLSLEKYYKEGCEDKVLST 92
E + G DN+ N F CP S++ E + D ++ E + ED VL T
Sbjct: 129 EAIRIAGFDNFADQLQESNGVFEACPEAHSEQGNESEDFKDLINSET--ECNIEDVVLPT 186
Query: 93 VH 94
VH
Sbjct: 187 VH 188
>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
protein C14C10.4 protein.
Length = 1058
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 75 LSLEKYYKEGCEDKVLSTVHSA 96
+ L+K Y+EG E L T+H A
Sbjct: 66 IKLQKKYQEGLESNKLETLHEA 87
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 7 ASFIKNKSTKEEDS---TYREFWDKIQNNLECCGVTGPDNYGASEPRLNPSFS 56
A F +N K E+S T+ + W+++ + + T D YG +++P+ S
Sbjct: 17 AKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKPVAKISPTAS 69
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 7 ASFIKNKSTKEEDS---TYREFWDKIQNNLECCGVTGPDNYGASEPRLNPSFS 56
A F +N K E+S T+ + W+++ + + T D YG +++P+ S
Sbjct: 17 AKFSRNNLLKPENSFPPTHFDTWERLSDYQKPSSSTTDDAYGKPVAKISPTAS 69
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,250,185
Number of Sequences: 27539
Number of extensions: 133893
Number of successful extensions: 303
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 23
length of query: 119
length of database: 12,573,161
effective HSP length: 73
effective length of query: 46
effective length of database: 10,562,814
effective search space: 485889444
effective search space used: 485889444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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