Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002795-TA|BGIBMGA002795-PA|IPR002645|Sulfate
transporter/antisigma-factor antagonist STAS, IPR011547|Sulphate
transporter
(221 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion transpo... 42 3e-04
Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78059-6|CAH04727.1| 362|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78014-4|CAH04707.1| 362|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion transpo... 30 1.1
AL031629-4|CAA20977.2| 436|Caenorhabditis elegans Hypothetical ... 30 1.1
AL021447-3|CAA16274.1| 459|Caenorhabditis elegans Hypothetical ... 30 1.1
AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical ... 30 1.1
Z92796-5|CAB07233.1| 518|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82088-3|CAF32230.1| 978|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82088-2|CAB05001.1| 705|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82088-1|CAB05000.2| 901|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81490-5|CAF32231.1| 978|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81490-4|CAB04016.1| 705|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81490-3|CAB04015.2| 901|Caenorhabditis elegans Hypothetical pr... 29 2.0
AJ303082-1|CAC19896.1| 901|Caenorhabditis elegans PMR1 protein ... 29 2.0
AJ303081-1|CAC19895.1| 901|Caenorhabditis elegans PMR1 protein ... 29 2.0
Z81109-14|CAE17917.2| 364|Caenorhabditis elegans Hypothetical p... 29 3.5
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 28 4.6
Z81533-10|CAB04341.1| 307|Caenorhabditis elegans Hypothetical p... 28 6.1
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical
protein F14D12.5 protein.
Length = 652
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 2 SGVVTPLGGVTKVXXXXXXXXXXXXXFYYIPKASLSGLIISAMFSMI-DYKIVQKLWRNS 60
SG T L G+T +P LS ++I + SM+ ++ LWR S
Sbjct: 382 SGAKTQLSGITSACFMALVITTIGPYLASLPSCILSAIVIVVLESMLRKCTVLPGLWRCS 441
Query: 61 KKELAILIVTGMVCLLYGLEYGIIAGI 87
K + I I+T +V L + G+ AGI
Sbjct: 442 KHDFWIWIITAVVTLSSDIAQGVAAGI 468
>AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion
transporter SULP-2 protein.
Length = 652
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 2 SGVVTPLGGVTKVXXXXXXXXXXXXXFYYIPKASLSGLIISAMFSMI-DYKIVQKLWRNS 60
SG T L G+T +P LS ++I + SM+ ++ LWR S
Sbjct: 382 SGAKTQLSGITSACFMALVITTIGPYLASLPSCILSAIVIVVLESMLRKCTVLPGLWRCS 441
Query: 61 KKELAILIVTGMVCLLYGLEYGIIAGI 87
K + I I+T +V L + G+ AGI
Sbjct: 442 KHDFWIWIITAVVTLSSDIAQGVAAGI 468
>Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical
protein K12G11.1 protein.
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 31 IPKASLSGLIISAMFSMI-DYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVI 89
+P A+LS +I A+ M + + LW+ SK + I +V+ + +L + G+I +
Sbjct: 469 LPMAALSAIICVALQGMFRKFADLIDLWKVSKIDFTIWVVSCVSTILLDVSTGLIISVCF 528
Query: 90 EAALLLHRVSRPK 102
+ R PK
Sbjct: 529 ALFTTILREQYPK 541
>Z78059-6|CAH04727.1| 362|Caenorhabditis elegans Hypothetical
protein C34B4.3 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELA---ILIVTGMVCLLYGLEYGIIAGIVI 89
A LS LI+ A+F++ Y I+ K+ + KE+ LI G LL YGI G+ I
Sbjct: 29 AGLS-LILIAVFAISLYAIMMKIMKRQDKEIVGYRFLISAGCSDLLLLFNYGIWPGLTI 86
>Z78014-4|CAH04707.1| 362|Caenorhabditis elegans Hypothetical
protein C34B4.3 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELA---ILIVTGMVCLLYGLEYGIIAGIVI 89
A LS LI+ A+F++ Y I+ K+ + KE+ LI G LL YGI G+ I
Sbjct: 29 AGLS-LILIAVFAISLYAIMMKIMKRQDKEIVGYRFLISAGCSDLLLLFNYGIWPGLTI 86
>AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion
transporter SULP-4 protein.
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 31 IPKASLSGLIISAMFSMI-DYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVI 89
+P A+LS +I A+ M + + LW+ SK + I +V+ + +L + G+I +
Sbjct: 469 LPMAALSAIICVALQGMFRKFADLIDLWKVSKIDFTIWVVSCVSTILLDVSTGLIISVCF 528
Query: 90 EAALLLHRVSRPK 102
+ R PK
Sbjct: 529 ALFTTILREQYPK 541
>AL031629-4|CAA20977.2| 436|Caenorhabditis elegans Hypothetical
protein Y106G6D.4 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 30 YIPKASLS-GLIISAMFSMIDYKIVQKLWRNSKKELAILIV 69
+ PK +LS GL++S + ++ DYK QK S K+ A I+
Sbjct: 320 FTPKCTLSNGLLVSQVITLDDYKTAQKNDSTSGKQYAAAIL 360
>AL021447-3|CAA16274.1| 459|Caenorhabditis elegans Hypothetical
protein F19B2.7 protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 58 RNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAALLLHRVSRPKLSANFVKSQKGDLL- 116
+ K + IL+ + + G G+ A I IEAA+L R+ ++ +++G++L
Sbjct: 347 KEKKVDRMILLQFETLVRMRGNSGGVAAAIAIEAAILGIRIPN-SIAVTGAINEEGEVLP 405
Query: 117 IVPLTEDISYCAAEHIRRTVIKESQE 142
+ + + +++C E+I ++ S +
Sbjct: 406 VSDIVDMVTHCFDENIESVIVPLSND 431
>AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical
protein F16B4.3 protein.
Length = 688
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 129 AEHIRRTVIKESQELSDTVIV--IDGTNLKNMDFTAASNLVLVVKELDKKSLRVLMLNFN 186
A I+R + ++ Q+L +++ + + NLKN V++ LDK+ L +LN
Sbjct: 20 AAKIQRKIDEDLQQLRESISLSTTEVQNLKNK--LELKEKVILDFRLDKEKLEEKVLNIE 77
Query: 187 LILKNLCVDIDRSIEEKFVYGTNVLVMPEVFLKA 220
+I++ C +I+ EEK + V M KA
Sbjct: 78 IIIEKRCKEIE---EEKINHEFTVKKMKVYIEKA 108
>Z92796-5|CAB07233.1| 518|Caenorhabditis elegans Hypothetical
protein H25K10.6 protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 148 IVIDGTNLKNMDFTAASNLVLVVKELDKKSLRVLMLNF--NLILKNLCVDID-RSIEEKF 204
+VI+GT+L+N+DF +NL + +D++ +++L ++ + NL I RS E
Sbjct: 408 LVINGTSLENLDF--LNNLQYITSLVDERVIQILSNDYLKSAYFPNLRNIISRRSYREVI 465
Query: 205 VYGTNVLVMP 214
V+ +L +P
Sbjct: 466 VHKNPLLSLP 475
>Z82088-3|CAF32230.1| 978|Caenorhabditis elegans Hypothetical
protein ZK256.1c protein.
Length = 978
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 436 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 494
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 495 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 551
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 552 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 589
>Z82088-2|CAB05001.1| 705|Caenorhabditis elegans Hypothetical
protein ZK256.1b protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 359 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 417
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 418 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 474
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 475 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 512
>Z82088-1|CAB05000.2| 901|Caenorhabditis elegans Hypothetical
protein ZK256.1a protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 359 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 417
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 418 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 474
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 475 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 512
>Z81490-5|CAF32231.1| 978|Caenorhabditis elegans Hypothetical
protein ZK256.1c protein.
Length = 978
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 436 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 494
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 495 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 551
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 552 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 589
>Z81490-4|CAB04016.1| 705|Caenorhabditis elegans Hypothetical
protein ZK256.1b protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 359 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 417
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 418 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 474
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 475 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 512
>Z81490-3|CAB04015.2| 901|Caenorhabditis elegans Hypothetical
protein ZK256.1a protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 359 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 417
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 418 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 474
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 475 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 512
>AJ303082-1|CAC19896.1| 901|Caenorhabditis elegans PMR1 protein
protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 359 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 417
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 418 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 474
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 475 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 512
>AJ303081-1|CAC19895.1| 901|Caenorhabditis elegans PMR1 protein
protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.0
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 34 ASLSGLIISAMFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGIVIEAAL 93
A ++G+ SA ++ Y+ +++ + + E A +I G+VC +E + G E A+
Sbjct: 359 AEITGIGYSAEGGVVQYQ-GEQVHQWTHPEFARIIEAGLVCNNATIEADKLIGQPTEGAI 417
Query: 94 LLHRVSRPKLSANFVKSQKGDLLIVPLTEDISY----CAAEHIRRTV-IKESQE--LSDT 146
+ V K V+S+ L +P + D + CA H + IK + + L
Sbjct: 418 V---VLAKKAQLEGVRSEYKRLREMPFSSDTKWMGVQCADAHGQNVYFIKGALDRVLDQC 474
Query: 147 VIVIDGTNL-KNMDFTAASNLVLVVKELDKKSLRVLML 183
N K D + +++ + KEL +K LRVL L
Sbjct: 475 GTYYSSDNQRKQCDQYSRQHILEIGKELGQKGLRVLGL 512
>Z81109-14|CAE17917.2| 364|Caenorhabditis elegans Hypothetical
protein R10D12.17 protein.
Length = 364
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 115 LLIVPLTEDISYCAAEHIRRTVIKESQELSDTVIVIDGTNLKNMDFTAASNLVLVVK 171
++IV L ++I +HI RTV T I++ ++ F +S L+ +V+
Sbjct: 218 IIIVFLIKEIIKSKKKHIERTVNPHHMRNEKTTILVTILSIVEFSFLLSSGLIFIVE 274
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 175 KKSLRVLMLNFNLILKNLCVDIDRSIEEKFVYGTNVLVMP 214
KK+L L L L L ++C +S ++KF Y NV ++P
Sbjct: 40 KKTLFFLFLVLILFLLHIC--FQKSRKQKFTYSQNVTLLP 77
>Z81533-10|CAB04341.1| 307|Caenorhabditis elegans Hypothetical
protein F36G9.14 protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 143 LSDTVIVIDGTNLKNMDFTAASNLVLVVKELDKKSLRVLMLNFNLILKNLCVDIDRSIEE 202
L+D I++ NL DFT + ++ + L+++ ++ ++ C+ RS+
Sbjct: 91 LNDLKIILQNPNLNLQDFTITFYVNGDNSKIRETYLKIIQKFWSTLI---CIKSQRSLIG 147
Query: 203 KFVYGTNVLVMPE 215
F +G V V+P+
Sbjct: 148 GFTFGELVYVLPK 160
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 166 LVLVVKELDKKSLRVLMLNFNLILKNLCVDIDRSIEEKFVYG 207
LV+++ ++D + + + + F + + LC I +E ++YG
Sbjct: 786 LVIILDKIDYQVIAIAIFTFAIAMLTLCASIREYKKETWMYG 827
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 166 LVLVVKELDKKSLRVLMLNFNLILKNLCVDIDRSIEEKFVYG 207
LV+++ ++D + + + + F + + LC I +E ++YG
Sbjct: 786 LVIILDKIDYQVIAIAIFTFAIAMLTLCASIREYKKETWMYG 827
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.140 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,435,496
Number of Sequences: 27539
Number of extensions: 157134
Number of successful extensions: 466
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 460
Number of HSP's gapped (non-prelim): 23
length of query: 221
length of database: 12,573,161
effective HSP length: 79
effective length of query: 142
effective length of database: 10,397,580
effective search space: 1476456360
effective search space used: 1476456360
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)
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