GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002795-TA|BGIBMGA002795-PA|IPR002645|Sulfate
transporter/antisigma-factor antagonist STAS, IPR011547|Sulphate
transporter
         (221 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 44  MFSMIDYKIVQKLWRNSKKELAILIVTGMVCLLYGLEYGIIAGI 87
           +F ++D K V +LW   K +  +   T    L Y  + GI+A +
Sbjct: 487 VFKLVDSKAVSRLWGLHKNKPDMNYETMGRALRYYYQRGILAKV 530


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 101 PKLSANFVKSQKGDLLIVPLTEDISYCA 128
           P+ S+N  +  K DLL +P    IS C+
Sbjct: 400 PESSSNLQEKTKIDLLEIPPIRKISDCS 427


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 95  LHRVSRPKLSANFVKSQKGDLLIVP 119
           +H++S+ KLS    K  K  ++  P
Sbjct: 266 MHQISKKKLSPATPKGSKCSMITTP 290


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.140    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,908
Number of Sequences: 429
Number of extensions: 1729
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 221
length of database: 140,377
effective HSP length: 55
effective length of query: 166
effective length of database: 116,782
effective search space: 19385812
effective search space used: 19385812
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)