Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002794-TA|BGIBMGA002794-PA|IPR011547|Sulphate
transporter
(334 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0018 + 3016137-3016186,3016529-3016776,3018717-3018811,302... 120 2e-27
01_05_0557 + 23243507-23243855,23243952-23244331,23244866-232449... 112 4e-25
01_06_0517 + 29981537-29981927,29982024-29982231,29982373-299825... 111 1e-24
10_08_0031 + 14281681-14282023,14282105-14282484,14282581-142826... 106 3e-23
03_02_0012 - 4914223-4914468,4914511-4914587,4914671-4914732,491... 105 4e-23
03_02_0014 + 4955759-4956106,4956229-4956277,4956372-4956579,495... 105 5e-23
03_01_0424 - 3253179-3253367,3253480-3253556,3253654-3253739,325... 104 1e-22
03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445,492... 102 5e-22
03_02_0015 + 4965894-4966214,4966339-4966387,4966504-4966890,496... 97 1e-20
08_02_0622 + 19422001-19422330,19422411-19422459,19422552-194227... 95 5e-20
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 78 9e-15
06_01_0319 - 2292071-2292208,2292342-2292418,2292758-2293321,229... 73 4e-13
11_05_0033 + 18500092-18501372,18502419-18502826,18502948-185029... 32 0.75
02_04_0474 - 23202739-23203011,23203103-23203469,23203592-232039... 32 0.75
09_04_0213 + 15706638-15707915 30 2.3
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 30 2.3
03_06_0498 - 34341441-34341575,34341808-34341945,34342019-343421... 30 3.0
08_02_0203 - 14231134-14231907 29 4.0
10_02_0186 + 6399245-6399414,6444721-6444783,6444913-6445026,644... 29 5.3
08_02_1248 - 25581974-25582975 28 9.2
>09_02_0018 +
3016137-3016186,3016529-3016776,3018717-3018811,
3020025-3020330,3021288-3021336,3021436-3021637,
3023364-3023532,3023605-3023634,3023742-3023807,
3025313-3025378,3029404-3029464,3029592-3029719,
3030716-3030757,3031074-3031190,3031280-3031339
Length = 562
Score = 120 bits (289), Expect = 2e-27
Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 8/168 (4%)
Query: 33 LPILSWLPKYKPGYFPQ-DFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSGVIYV 91
LP LSW+ Y+ Q D AGITVG+ +PQ ++YA +AGL P +GLY +Y
Sbjct: 201 LPCLSWMRTYRLKEDLQADLAAGITVGVMLVPQAMSYAKLAGLHPIYGLYTGFVPLFVYA 260
Query: 92 FFGSCYNVTVGPTAILAAMTAKYV-------SNYSADFAILVAFISGLVILGMGILQLGF 144
FGS + VGP A+++ + + + S + AIL+AF+ G++ MG+L+LG+
Sbjct: 261 IFGSSRQLAVGPVALVSLLVSNVLGGIVDSSSELYTELAILLAFMVGVLECLMGLLRLGW 320
Query: 145 LVEFISMPVISGFTTAAALQIAASQLKSFVGLSGPSGNYFAESIENLI 192
L+ FIS VISGFTTA+A+ I SQ+K F+G S + IE++I
Sbjct: 321 LIRFISHSVISGFTTASAIVIGLSQIKYFLGYSVTRSSKIIPLIESII 368
>01_05_0557 +
23243507-23243855,23243952-23244331,23244866-23244931,
23245023-23245136,23245226-23245342,23245444-23245570,
23245660-23246486
Length = 659
Score = 112 bits (269), Expect = 4e-25
Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 18/235 (7%)
Query: 33 LPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSGVIYVF 92
+P L W Y F D +AG+T+ +IPQGI+YA +AG+PP GLY+ ++Y
Sbjct: 69 VPALDWGAGYSAASFWYDLLAGVTIASLSIPQGISYATLAGIPPVIGLYSCFVPPLVYAV 128
Query: 93 FGSCYNVTVGPTAILAAMTAKYV------SNYSADFAILV---AFISGLVILGMGILQLG 143
GS N+ VGP A + + A V S+ + LV AF +G++ +G+L+LG
Sbjct: 129 MGSSRNLGVGPVATSSLLVASIVGGKVRASDDQRLYTQLVFTSAFFTGVLQAALGLLRLG 188
Query: 144 FLVEFISMPVISGFTTAAALQIAASQLKSFVGLSGPSGNYFAESIENLIV-NFKTMKLYE 202
LV+F+S P I+GF A+ I QLK F+G++ + S+ I N +
Sbjct: 189 ILVDFMSRPAITGFMGGTAIVIMLQQLKGFLGMTHFTTKTDIVSVLRYIFHNTHQWQWQS 248
Query: 203 PILGLATIIMLMLLKKLGEGCKRTDGFIKQVRWFISLSRNAVVIVVGMTVAFILK 257
+LG+ +I L+ +++ +R F W +S +V+VVG +F++K
Sbjct: 249 TVLGVCFLIFLVFTEQVRR--RRPKLF-----W-VSAMSPLLVVVVGCVFSFLIK 295
>01_06_0517 +
29981537-29981927,29982024-29982231,29982373-29982544,
29984468-29984533,29984658-29984771,29984880-29984996,
29985097-29985223,29985317-29985603,29985701-29985891,
29985981-29986063,29986175-29986251,29986729-29986896
Length = 666
Score = 111 bits (266), Expect = 1e-24
Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 21/247 (8%)
Query: 21 RKTCSVKTLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGL 80
R C+VK +P L W+P+Y F D +AGIT+ AIPQGI+YA +A LPP GL
Sbjct: 74 RAWCAVKYF---VPALDWVPRYGLDKFKFDLLAGITIASLAIPQGISYARLANLPPIIGL 130
Query: 81 YASLTSGVIYVFFGSCYNVTVGPTAILAAMTAKYV-SNYSAD--------FAILVAFISG 131
Y+S ++Y FGS N+ VG A + + A + + +AD AF +G
Sbjct: 131 YSSFVPPLMYAVFGSSNNLAVGTVAAASLLLASIIETEVAADENPQLYLQLFYTAAFFTG 190
Query: 132 LVILGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLSGPSGNYFAESIENL 191
L +G+ +LG +V+F+S I+GF A+ I Q K +G+ + S+ +
Sbjct: 191 LFQTALGVFRLGLIVDFLSRSTITGFMGGTAMIIILQQFKGLLGMKHFTTKTDIISVLHS 250
Query: 192 IVNFK-TMKLYEPILGLATIIMLMLLKKLGEGCKRTDGFIKQVRWFISLSRNAVVIVVGM 250
+++ K +LG+ ++ LM K L + + ++ W +S +V+V+G
Sbjct: 251 TYHYRHEWKWQSAVLGICFLLFLMSSKHLRKK-------LPKLFW-VSAIAPFMVVVIGG 302
Query: 251 TVAFILK 257
AF++K
Sbjct: 303 IFAFLVK 309
>10_08_0031 +
14281681-14282023,14282105-14282484,14282581-14282646,
14284078-14284191,14284302-14284418,14284526-14284652,
14284779-14285065,14285200-14285390,14285504-14285589,
14285718-14285794,14285902-14286090
Length = 658
Score = 106 bits (254), Expect = 3e-23
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 25 SVKTLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASL 84
++ L+ P L WLP Y D +AG+T+ A+PQGI+YA + LPP GLY+S
Sbjct: 59 ALAALRYVFPFLEWLPSYSLAALWSDVVAGVTIASLAVPQGISYAKLGDLPPIMGLYSSF 118
Query: 85 TSGVIYVFFGSCYNVTVGPTAILAAMTAKYVSNYS---------ADFAILVAFISGLVIL 135
++Y GS + VG TA+ + + A + + A A F +G++
Sbjct: 119 VPPLVYAVMGSSRELAVGTTAVASLLFAATLGKEAPPGEKPELYAALAFTATFFAGVLQA 178
Query: 136 GMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLS 177
G+G+L+LGFLV+ +S I GF AA + QLK +GL+
Sbjct: 179 GLGVLRLGFLVDLLSHAAIVGFMAGAATIVCLQQLKGMLGLA 220
>03_02_0012 -
4914223-4914468,4914511-4914587,4914671-4914732,
4914825-4915018,4915153-4915439,4915520-4915646,
4916216-4916446,4917210-4917384,4917461-4917668,
4917745-4917793,4918016-4918300
Length = 646
Score = 105 bits (253), Expect = 4e-23
Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 26 VKTLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLT 85
+ L+ PIL W Y +F D +AG+T+ +IPQ I YA +A L P++GLY S+
Sbjct: 57 MSVLQGLFPILDWWKTYNLKFFRSDLMAGLTLASLSIPQSIGYATLAKLDPQYGLYTSVV 116
Query: 86 SGVIYVFFGSCYNVTVGPTAI----LAAMTAKYVS-----NYSADFAILVAFISGLVILG 136
++Y GS + +GP AI L++M K V + V F++G+
Sbjct: 117 PPLVYAVTGSSREIAIGPVAIVSLLLSSMIQKIVDPSVDPAFYRKMVFTVTFLTGVFQFA 176
Query: 137 MGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLS 177
G+ +LGFLV+F+S I GF AA+ I QLK +GLS
Sbjct: 177 FGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGLS 217
>03_02_0014 +
4955759-4956106,4956229-4956277,4956372-4956579,
4956700-4956874,4956981-4957046,4957150-4957263,
4957366-4957482,4957589-4957715,4957826-4958112,
4958209-4958399,4958937-4959022,4959117-4959193,
4959330-4959473
Length = 662
Score = 105 bits (252), Expect = 5e-23
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 28 TLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSG 87
+L+ P+L W Y F D ++G+T+ IPQ I YA +AGL P +GLY+S
Sbjct: 80 SLQNFFPVLDWGRHYTFRKFRGDLVSGLTIASLCIPQDIGYAKLAGLLPNYGLYSSFVPP 139
Query: 88 VIYVFFGSCYNVTVGPTAILAAMTAKYVSN---------YSADFAILVAFISGLVILGMG 138
+IY GS ++ +GP A+++ + + N A F +G+ +G
Sbjct: 140 LIYAMMGSSRDIAIGPVAVVSLLLGTLLQNEFDPKKNQEEYTRLAFTATFFAGVTQAALG 199
Query: 139 ILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLS 177
L+LGF++EF+S I GF AA+ IA QLK F+G++
Sbjct: 200 FLRLGFIIEFLSHAAIVGFMAGAAITIALQQLKGFLGIA 238
>03_01_0424 -
3253179-3253367,3253480-3253556,3253654-3253739,
3253844-3254321,3254393-3254519,3254624-3254740,
3254853-3254966,3256650-3256715,3257738-3258117,
3258217-3258496
Length = 637
Score = 104 bits (249), Expect = 1e-22
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 12/184 (6%)
Query: 2 TVLPNIDPSPCRKKIKKTLRKTCSVKTLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTA 61
T LP+ DP ++ + R+ + L+ P + W P Y G D IAGIT+ A
Sbjct: 18 TFLPD-DPFRVVRRERGCGRRAAAA--LRYVFPFMEWAPSYTLGTLKSDLIAGITIASLA 74
Query: 62 IPQGIAYAVVAGLPPEHGLYASLTSGVIYVFFGSCYNVTVGPTAILAAMTAKYVS-NYSA 120
IPQGI+YA +A LPP GLY+S ++Y GS ++ VG A+ + + +S SA
Sbjct: 75 IPQGISYAKLANLPPVLGLYSSFVPPLVYAMMGSSRDLAVGTVAVASLLIGSMLSEEVSA 134
Query: 121 --------DFAILVAFISGLVILGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKS 172
A+ F +G+ +G+L+LGF+V+F+S I GF AA + QLK
Sbjct: 135 AEDPALYLHVALTATFFAGVFQALLGVLRLGFIVDFLSHATIVGFMGGAATVVCLQQLKG 194
Query: 173 FVGL 176
GL
Sbjct: 195 MFGL 198
>03_02_0013 -
4921925-4922077,4922176-4922252,4922360-4922445,
4922527-4922720,4922829-4923115,4923219-4923345,
4923586-4923816,4923982-4924047,4925300-4925474,
4925563-4925770,4925886-4925934,4926249-4926578
Length = 660
Score = 102 bits (244), Expect = 5e-22
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 25 SVKTLKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASL 84
++ L+ P+L W Y F D +AG+T+ IPQ I YA +A L P++GLY S+
Sbjct: 71 ALTALQTVFPVLQWGRTYNFKLFRSDVMAGLTLASLGIPQSIGYANLAKLDPQYGLYTSV 130
Query: 85 TSGVIYVFFGSCYNVTVGPTAI----LAAMTAKYVS------NYSADFAILVAFISGLVI 134
+IY G+ + +GP A+ L++M +K V Y A V F++G+
Sbjct: 131 VPPLIYAVMGTSREIAIGPVAVVSLLLSSMVSKIVDPAVDPVTYRA-LVFTVTFLAGVFQ 189
Query: 135 LGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLS 177
+ G+ +LGFLV+F+S I GF AA+ I QLK +GLS
Sbjct: 190 VSFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGLS 232
>03_02_0015 +
4965894-4966214,4966339-4966387,4966504-4966890,
4966976-4967034,4967128-4967241,4967344-4967460,
4967558-4967684,4967764-4968050,4968148-4968338,
4968801-4968886,4968975-4969051,4969161-4969304
Length = 652
Score = 97.5 bits (232), Expect = 1e-20
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 29 LKRRLPILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSGV 88
L+ P+ W +Y F D IAG+T+ IPQ I YA +A LPPE GL++S +
Sbjct: 72 LQHVFPVFEWGRQYTLAKFKGDLIAGLTLASLVIPQDIGYAKLANLPPEIGLHSSFVPPL 131
Query: 89 IYVFFGSCYNVTVGPTAILAAMTAKYV------SNYSADF---AILVAFISGLVILGMGI 139
IY G+ + +GP A+++ + + D+ A F +G+ +G
Sbjct: 132 IYALMGTSRELAMGPVAVISLLLGTLLQEEIDSKKNPLDYRRLAFTATFFAGVTQAALGF 191
Query: 140 LQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGLS 177
+LGF++ F+S I GF AA+ IA QLK F+G++
Sbjct: 192 CRLGFIIAFLSHAAIIGFMAGAAITIALQQLKGFLGIA 229
>08_02_0622 +
19422001-19422330,19422411-19422459,19422552-19422759,
19422832-19423006,19423101-19423166,19423264-19423377,
19423473-19423589,19423677-19423803,19423893-19424179,
19424279-19424469,19424571-19424656,19424749-19424825,
19425057-19425200
Length = 656
Score = 95.5 bits (227), Expect = 5e-20
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 34 PILSWLPKYKPGYFPQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSGVIYVFF 93
PI W Y F D IAG+T+ IPQ I Y+ +A L ++GLY+S +IY
Sbjct: 80 PIFEWGRCYNLRKFKGDLIAGLTIASLCIPQDIGYSKLANLDAQYGLYSSFVPPLIYAAM 139
Query: 94 GSCYNVTVGPTAILAAMTAKYVSN---------YSADFAILVAFISGLVILGMGILQLGF 144
GS ++ +GP A+++ + + N A F +G+ +G L+LGF
Sbjct: 140 GSSKDIAIGPVAVVSLLIGSLLQNEVDPVKNKEEYLRLAFTATFFAGITQAALGFLRLGF 199
Query: 145 LVEFISMPVISGFTTAAALQIAASQLKSFVGL 176
L+EF+S I GF AA+ IA QLK +G+
Sbjct: 200 LIEFLSHAAIVGFMGGAAITIALQQLKYVLGI 231
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 78.2 bits (184), Expect = 9e-15
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 65 GIAYAVVAGLPPEHGLYASLTSGVIYVFFGSCYNVTVGPTAI----LAAMTAKYVSNYSA 120
GI+YA +A LPP GLY+S ++Y GS ++ VGP +I + +M + VS +
Sbjct: 59 GISYAKLASLPPIIGLYSSFVPPMVYAVLGSSRDLAVGPVSIASLIMGSMLRQAVSPAAE 118
Query: 121 -----DFAILVAFISGLVILGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVG 175
A F +GLV +GIL+LGF+++F+S + GF AA+ ++ QLK+ +G
Sbjct: 119 PLLFLQLAFTSTFFAGLVQASLGILRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKALLG 178
Query: 176 LSGPSGNYFAESIENLIVNFKTMKLYEPILGLATIIMLMLLKK---LGEGCKRTDG 228
+ + + +++ ++ IL ++L+L + +G K T+G
Sbjct: 179 IVHFTTEMGLVPVMASVIHHTKEWSWQTILMAVCFLVLLLTARHVSVGSDWKATNG 234
>06_01_0319 -
2292071-2292208,2292342-2292418,2292758-2293321,
2293978-2294104,2294207-2294323,2294440-2294547,
2296567-2296804,2296915-2297122,2297199-2297247,
2297384-2297728
Length = 656
Score = 72.5 bits (170), Expect = 4e-13
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 65 GIAYAVVAGLPPEHGLYASLTSGVIYVFFGSCYNVTVGPTAI----LAAMTAKYVSNYSA 120
GI+YA +A LPP GLY+S +IY GS ++ VGP +I + +M + VS
Sbjct: 116 GISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRDLAVGPVSIASLVMGSMLRQAVSPDQE 175
Query: 121 -----DFAILVAFISGLVILGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVG 175
A F +G+ +G L+LGF+V+F+S ++GF AA+ ++ QLK +G
Sbjct: 176 PILYLQLAFTSTFFAGVFQASLGFLRLGFIVDFLSKATLTGFMGGAAIIVSLQQLKGLLG 235
Query: 176 L 176
+
Sbjct: 236 I 236
>11_05_0033 +
18500092-18501372,18502419-18502826,18502948-18502990,
18503236-18503282,18504582-18505901
Length = 1032
Score = 31.9 bits (69), Expect = 0.75
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 112 AKYVSNYSADFAILVAFISGLVIL--GMGILQLGFLVEFISMPVISGFTTA 160
A + + D VAF +GL +L G G + +GF V F+ +P+ISG+ A
Sbjct: 391 AAHAAGKVGDAVSSVAF-TGLAVLVSGAGAIVIGFPVMFLPLPMISGYYAA 440
>02_04_0474 -
23202739-23203011,23203103-23203469,23203592-23203990,
23204060-23204397,23204558-23204782,23205025-23205073,
23205281-23205462
Length = 610
Score = 31.9 bits (69), Expect = 0.75
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 218 KLGEGCKRTDGFIKQVRWFISLSRNAVVIVVG 249
KLG GCK G K + F++LS N V + G
Sbjct: 410 KLGHGCKNNKGTPKLIEHFLTLSFNPVSVAAG 441
>09_04_0213 + 15706638-15707915
Length = 425
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 210 IIMLMLLKKLGEGCKRTDGFIKQVRWFISLSRNAVVIVVGMTVAFI 255
I M+ L+ +G G +RT F+K +R+ + L+ A +++ G V F+
Sbjct: 22 IAMVAPLRDVGRGGERTWVFLKPLRYDLWLASAAFLLLTGFAVWFV 67
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 301 MGTGFVVLPLVAIIESVAIAKLSQVVLQW 329
M T FVVL LV I+ VA+A L++ W
Sbjct: 221 MPTPFVVLSLVPIVGGVALASLTEASFNW 249
>03_06_0498 -
34341441-34341575,34341808-34341945,34342019-34342117,
34342320-34342400,34342548-34342610,34342717-34342764,
34343033-34343410,34345413-34345537,34345635-34345701,
34345797-34345856,34346495-34346621,34346670-34346986
Length = 545
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 52 IAGITVGLTAIPQGIAY----AVVAGLPPEHGLYASLTSGVIYVFFGSCYNVTVG-PTAI 106
IA +++ L+A G + ++ GL LY +L ++ + TA
Sbjct: 141 IAPLSISLSAELSGTTWFSLSSIQLGLVASGSLYGALGGSLLAYRVADFLGRRIELVTAA 200
Query: 107 LAAMTAKYVSNYSADFAILVAFISGLVILGMGILQLGFLVEFISMPVISGF 157
++ V+ ++ DF +L+ G ++ G+GI G+LV + + V+ G+
Sbjct: 201 ALYISGALVTGFAPDFVLLII---GRLLYGIGIGLTGYLVGSLEIDVVGGW 248
>08_02_0203 - 14231134-14231907
Length = 257
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 48 PQDFIAGITVGLTAIPQGIAYAVVAGLPPEHGLYASLTSGVIYVFFGSCYNVTV 101
P + IT T G ++ VVA +PP GL + + Y + GSCY + +
Sbjct: 179 PSGYYKLITPSPTVKGHGGSHRVVADIPPPSGLLVEGPNHIRY-YRGSCYRLVM 231
>10_02_0186 +
6399245-6399414,6444721-6444783,6444913-6445026,
6445124-6445364,6446002-6446202,6446244-6446395,
6446539-6446689
Length = 363
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 125 LVAF-ISGLVILGMGILQLGFLVEFISMPVISGFTTAAALQIAASQLKSFVGL 176
LV F + GL +G+G G+ + F ++ I+ F A + ++S VG+
Sbjct: 76 LVGFTVPGLYYIGLGDTSPGYAINFYNIVPIAAFILAVLFRKEPLNMRSIVGI 128
>08_02_1248 - 25581974-25582975
Length = 333
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 134 ILGMGILQLGFLVEFISM-PVISGFTTAAALQIAASQLKSFVGLSG 178
++G+GI + G + + ++ P I G++ L+ A LKS VGL G
Sbjct: 160 LVGLGIDKEGMIGKIMAKEPYIMGYSVDKRLRPTAEFLKSAVGLEG 205
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.325 0.140 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,827,360
Number of Sequences: 37544
Number of extensions: 331108
Number of successful extensions: 923
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 890
Number of HSP's gapped (non-prelim): 24
length of query: 334
length of database: 14,793,348
effective HSP length: 82
effective length of query: 252
effective length of database: 11,714,740
effective search space: 2952114480
effective search space used: 2952114480
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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