Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002793-TA|BGIBMGA002793-PA|IPR007266|Endoplasmic
reticulum oxidoreductin 1
(513 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-14|CAC70110.4| 478|Caenorhabditis elegans Hypothetical... 344 8e-95
AL132877-15|CAD92388.1| 439|Caenorhabditis elegans Hypothetical... 276 3e-74
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 31 2.6
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 30 3.4
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 5.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 5.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 5.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 5.9
AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear recep... 29 5.9
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 29 5.9
AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear recep... 29 5.9
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 29 5.9
AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear horm... 29 5.9
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 29 5.9
Z81133-6|CAJ85766.1| 398|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 29 7.8
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 29 7.8
>AL132877-14|CAC70110.4| 478|Caenorhabditis elegans Hypothetical
protein Y105E8B.8a protein.
Length = 478
Score = 344 bits (846), Expect = 8e-95
Identities = 188/441 (42%), Positives = 250/441 (56%), Gaps = 21/441 (4%)
Query: 36 CFDELHGSLGDCSC-KVDTIDFFNNVKIFPRIQSIVTKDYFRFYKVNLKKECPFWADDSR 94
CF + ++ C C K TID NN +I+ ++Q ++ KD+FRFYKVN+ K CPFWADD +
Sbjct: 28 CFCKGFEAVEPCDCSKPQTIDKLNNHRIYEKVQKLLKKDFFRFYKVNMDKTCPFWADDRQ 87
Query: 95 CAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSKEAQSDCKSDLDHDPQLSYLNMT 154
C C I C E VP G A +E D + D + ++ T
Sbjct: 88 CGTNQCGIAFCDDE-VPA---GLRRRNAVNMEAAAVKEEEDDDAEKCADAGNNIDPMDRT 143
Query: 155 ISAANQYEIAKWKVHDDA-HDNFCE-SXXXXXXXXXXXLTLNPERYTGYKGPSAHRIWRS 212
+ + ++ HDD D FCE L+ NPERYTGY G S R+W+S
Sbjct: 144 LHDDEKRQLDAMDHHDDGLEDKFCEIEDDESDGMHYVDLSKNPERYTGYAGKSPQRVWKS 203
Query: 213 IYQENCFRPKLNPYESFPYVLSSDLSNLCLETRVFYRAISGLHTSINIHLCS-KFLLSEK 271
IY+ENCF+P +P ++ + +CLE RVFYR ISGLH++I I + + +
Sbjct: 204 IYEENCFKP--DPKFDKNFLTNPSNFGMCLEKRVFYRLISGLHSAITISIAAYNYKPPPP 261
Query: 272 SLGFVAPPEGEWGPNLEEFQRRFDPSQTMGESTNWLKNLYFVYLLEMRALAKAGPYLEQE 331
SLG G W N E F RF + E L+N+YF+YLLE+RAL KA PYL+ E
Sbjct: 262 SLGQFGSQMGTWFRNTEMFAGRFGTKWSW-EGPQRLRNVYFIYLLELRALLKAAPYLQNE 320
Query: 332 EYFTGNPTEDEETRQAISNMLGVIYSFPEHFNESSMFKG-GSQVETLKNEFRDHFRNISR 390
++TGN ED ETR+A+ ++L I ++P HF+ES MF G S L+ EFR HF NISR
Sbjct: 321 LFYTGNDVEDAETRKAVEDLLEEIRAYPNHFDESEMFTGVESHARALREEFRSHFVNISR 380
Query: 391 IMDCVGCDKCKLWGKLQTQGLGTALKILFSDKWNSPEADPSSGKLPLRHKSHKKLQRTEI 450
IMDCV CDKC+LWGK+QT G+GTALKILFSD +S S S +L R E+
Sbjct: 381 IMDCVECDKCRLWGKVQTHGMGTALKILFSDLPHSHYKQDS---------SKFQLTRNEV 431
Query: 451 VALFNAFARLSNSIRELENFR 471
VAL +F R S+SI E++NFR
Sbjct: 432 VALLQSFGRYSSSILEVDNFR 452
>AL132877-15|CAD92388.1| 439|Caenorhabditis elegans Hypothetical
protein Y105E8B.8b protein.
Length = 439
Score = 276 bits (676), Expect = 3e-74
Identities = 167/425 (39%), Positives = 228/425 (53%), Gaps = 47/425 (11%)
Query: 82 LKKECPFWADD-----SRCAMKYCH---------------IKTCTKESVPGYETGYNN-- 119
+ K CPFWADD ++C + +C ++ + ES +NN
Sbjct: 1 MDKTCPFWADDRQCGTNQCGIAFCDDEVPAGLRRRNAVNMVRRSSHESSHEISENHNNNR 60
Query: 120 -EYVDETP--------ATKYSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEIAKWKVHD 170
+ +ET A +E D + D + ++ T+ + ++ HD
Sbjct: 61 QQRWNETTKIGVIVQEAAAVKEEEDDDAEKCADAGNNIDPMDRTLHDDEKRQLDAMDHHD 120
Query: 171 DA-HDNFCE-SXXXXXXXXXXXLTLNPERYTGYKGPSAHRIWRSIYQENCFRPKLNPYES 228
D D FCE L+ NPERYTGY G S R+W+SIY+ENCF+P +P
Sbjct: 121 DGLEDKFCEIEDDESDGMHYVDLSKNPERYTGYAGKSPQRVWKSIYEENCFKP--DPKFD 178
Query: 229 FPYVLSSDLSNLCLETRVFYRAISGLHTSINIHLCS-KFLLSEKSLGFVAPPEGEWGPNL 287
++ + +CLE RVFYR ISGLH++I I + + + SLG G W N
Sbjct: 179 KNFLTNPSNFGMCLEKRVFYRLISGLHSAITISIAAYNYKPPPPSLGQFGSQMGTWFRNT 238
Query: 288 EEFQRRFDPSQTMGESTNWLKNLYFVYLLEMRALAKAGPYLEQEEYFTGNPTEDEETRQA 347
E F RF + E L+N+YF+YLLE+RAL KA PYL+ E ++TGN ED ETR+A
Sbjct: 239 EMFAGRFGTKWSW-EGPQRLRNVYFIYLLELRALLKAAPYLQNELFYTGNDVEDAETRKA 297
Query: 348 ISNMLGVIYSFPEHFNESSMFKG-GSQVETLKNEFRDHFRNISRIMDCVGCDKCKLWGKL 406
+ ++L I ++P HF+ES MF G S L+ EFR HF NISRIMDCV CDKC+LWGK+
Sbjct: 298 VEDLLEEIRAYPNHFDESEMFTGVESHARALREEFRSHFVNISRIMDCVECDKCRLWGKV 357
Query: 407 QTQGLGTALKILFSDKWNSPEADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRE 466
QT G+GTALKILFSD +S S S +L R E+VAL +F R S+SI E
Sbjct: 358 QTHGMGTALKILFSDLPHSHYKQDS---------SKFQLTRNEVVALLQSFGRYSSSILE 408
Query: 467 LENFR 471
++NFR
Sbjct: 409 VDNFR 413
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 29 KPCDSTACFDELHGSLGDCSCKVDTID 55
KPCDST + H S + SC+VDT+D
Sbjct: 1538 KPCDSTQS-SKSHCSESNMSCEVDTVD 1563
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 120 EYVDETPATKYSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEI 163
+Y E Y K A + +D+D L+Y+ +TI ++Q EI
Sbjct: 293 QYFPENVQVGYGKTADEQLNTYVDNDGDLAYILLTIRPSSQAEI 336
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 409 QGLGTALKILFSDKWNSPEADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRELE 468
Q TA+K F ++W EA+ + LR + K +Q EI L R +E+E
Sbjct: 1622 QNTVTAMK-KFEEEWKRLEAEMRAELKILRKE--KLMQTAEIEDLKRKSFRSDTEKKEIE 1678
Query: 469 NFRIMLSQSAMVYEHHFD 486
R+ L + + H D
Sbjct: 1679 GIRVRLEREISALKRHVD 1696
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 409 QGLGTALKILFSDKWNSPEADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRELE 468
Q TA+K F ++W EA+ + LR + K +Q EI L R +E+E
Sbjct: 1622 QNTVTAMK-KFEEEWKRLEAEMRAELKILRKE--KLMQTAEIEDLKRKSFRSDTEKKEIE 1678
Query: 469 NFRIMLSQSAMVYEHHFD 486
R+ L + + H D
Sbjct: 1679 GIRVRLEREISALKRHVD 1696
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 409 QGLGTALKILFSDKWNSPEADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRELE 468
Q TA+K F ++W EA+ + LR + K +Q EI L R +E+E
Sbjct: 1382 QNTVTAMK-KFEEEWKRLEAEMRAELKILRKE--KLMQTAEIEDLKRKSFRSDTEKKEIE 1438
Query: 469 NFRIMLSQSAMVYEHHFD 486
R+ L + + H D
Sbjct: 1439 GIRVRLEREISALKRHVD 1456
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 409 QGLGTALKILFSDKWNSPEADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRELE 468
Q TA+K F ++W EA+ + LR + K +Q EI L R +E+E
Sbjct: 1622 QNTVTAMK-KFEEEWKRLEAEMRAELKILRKE--KLMQTAEIEDLKRKSFRSDTEKKEIE 1678
Query: 469 NFRIMLSQSAMVYEHHFD 486
R+ L + + H D
Sbjct: 1679 GIRVRLEREISALKRHVD 1696
>AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 339
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 94 RCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSK---EAQSDCKSD 141
RCA +YC + C + N + + T T+ K + SDC SD
Sbjct: 64 RCACRYCRFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSD 114
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 94 RCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSK---EAQSDCKSD 141
RCA +YC + C + N + + T T+ K + SDC SD
Sbjct: 55 RCACRYCRFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSD 105
>AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 94 RCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSK---EAQSDCKSD 141
RCA +YC + C + N + + T T+ K + SDC SD
Sbjct: 64 RCACRYCRFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSD 114
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 94 RCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSK---EAQSDCKSD 141
RCA +YC + C + N + + T T+ K + SDC SD
Sbjct: 64 RCACRYCRFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSD 114
>AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform b protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 94 RCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSK---EAQSDCKSD 141
RCA +YC + C + N + + T T+ K + SDC SD
Sbjct: 64 RCACRYCRFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSD 114
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 94 RCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSK---EAQSDCKSD 141
RCA +YC + C + N + + T T+ K + SDC SD
Sbjct: 64 RCACRYCRFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSD 114
>Z81133-6|CAJ85766.1| 398|Caenorhabditis elegans Hypothetical
protein T28B8.3b protein.
Length = 398
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/55 (21%), Positives = 27/55 (49%)
Query: 427 EADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRELENFRIMLSQSAMVY 481
+ +P +GK+ R S L+ ++ + + R+ N+ + + FR++L Y
Sbjct: 98 DLNPPTGKMSRRRSSAIDLEDIKVSGMDTIYTRMHNNFQSMTYFRVLLQTITQHY 152
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/55 (21%), Positives = 27/55 (49%)
Query: 427 EADPSSGKLPLRHKSHKKLQRTEIVALFNAFARLSNSIRELENFRIMLSQSAMVY 481
+ +P +GK+ R S L+ ++ + + R+ N+ + + FR++L Y
Sbjct: 1538 DLNPPTGKMSRRRSSAIDLEDIKVSGMDTIYTRMHNNFQSMTYFRVLLQTITQHY 1592
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 29.1 bits (62), Expect = 7.8
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 11 ILFALAIVQAVGYDTE---LTKPCDSTACFDELHGSLGDCSCKVDTIDFFNNVKIFPRIQ 67
+L + I YD T PC STA +L ++G S V +++ N+ + P Q
Sbjct: 275 VLAEIVIATGAQYDWNHQAYTLPCSSTATLPDLVFTIGGNSYNVRAVEYVVNLNL-PNGQ 333
Query: 68 SIVTKDYFRFYKVNLKKECPFWADDSRCAMKYCHI 102
++ + P W YCHI
Sbjct: 334 CALS-----LFGTFSSPSGPLWVFGDNFLRSYCHI 363
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,784,384
Number of Sequences: 27539
Number of extensions: 599881
Number of successful extensions: 1481
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1466
Number of HSP's gapped (non-prelim): 18
length of query: 513
length of database: 12,573,161
effective HSP length: 85
effective length of query: 428
effective length of database: 10,232,346
effective search space: 4379444088
effective search space used: 4379444088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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